RNA–Protein interactions for RNA: ENST00000445140.6

FXR1-203, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FXR1, Length 2,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-203ENST00000445140 CHD5Q8TDI0 1954 aa9.17□□□□□ -0.94
FXR1-203ENST00000445140 RCCD1A6NED2 376 aa9.17□□□□□ -0.94
FXR1-203ENST00000445140 MOSPD3O75425 235 aa9.17□□□□□ -0.94
FXR1-203ENST00000445140 USP46P62068 366 aa9.17□□□□□ -0.94
FXR1-203ENST00000445140 C5orf22Q49AR2 442 aa9.17□□□□□ -0.94
FXR1-203ENST00000445140 SCN4BQ8IWT1 228 aa9.17□□□□□ -0.94
FXR1-203ENST00000445140 TRIM58Q8NG06 486 aa9.17□□□□□ -0.94
FXR1-203ENST00000445140 MICAL1Q8TDZ2 1067 aa9.17□□□□□ -0.94
FXR1-203ENST00000445140 CD101Q93033 1021 aa9.17□□□□□ -0.94
FXR1-203ENST00000445140 FBXO32Q969P5 355 aa9.17□□□□□ -0.94
FXR1-203ENST00000445140 GUCD1Q96NT3 240 aa9.17□□□□□ -0.94
FXR1-203ENST00000445140 SERPINB11Q96P15 392 aa9.17□□□□□ -0.94
FXR1-203ENST00000445140 NUP85Q9BW27 656 aa9.17□□□□□ -0.94
FXR1-203ENST00000445140 ZNF334Q9HCZ1 680 aaPredicted RBP9.17□□□□□ -0.94
FXR1-203ENST00000445140 WDR6Q9NNW5 1121 aaKnown RBP9.17□□□□□ -0.94
FXR1-203ENST00000445140 GDE1Q9NZC3 331 aa9.17□□□□□ -0.94
FXR1-203ENST00000445140 TRPM5Q9NZQ8 1165 aa9.17□□□□□ -0.94
FXR1-203ENST00000445140 CXorf51AA0A1B0GTR3 108 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 YJEFN3A6XGL0 299 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 MIF4GDA9UHW6 222 aaKnown RBP9.16□□□□□ -0.94
FXR1-203ENST00000445140 E7ENQ6 273 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 IRAK2O43187 625 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 PSTPIP1O43586 416 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 SLC2A3P11169 496 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 CXCR3P49682 368 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 GPR15P49685 360 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 ZNF252P-AS1Q0IIN9 211 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 TAF10Q12962 218 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 TRIP4Q15650 581 aaPredicted RBP9.16□□□□□ -0.94
FXR1-203ENST00000445140 FAM102AQ5T9C2 384 aaPredicted RBP9.16□□□□□ -0.94
FXR1-203ENST00000445140 BSPRYQ5W0U4 402 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 KIAA1328Q86T90 577 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 SMRP1Q8NCR6 262 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 SLC35G2Q8TBE7 412 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 RIPOR3Q96MK2 946 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 GCNAQ96QF7 691 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 PACSIN1Q9BY11 444 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 LACRTQ9GZZ8 138 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 PRDM12Q9H4Q4 367 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 SYNCQ9H7C4 482 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 SEPT11Q9NVA2 429 aaKnown RBP9.16□□□□□ -0.94
FXR1-203ENST00000445140 ARHGEF38Q9NXL2 777 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 RCOR3Q9P2K3 495 aaPredicted RBP9.16□□□□□ -0.94
FXR1-203ENST00000445140 MTUS1Q9ULD2 1270 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 PYCARDQ9ULZ3 195 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 ARHGAP26Q9UNA1 814 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 TLR6Q9Y2C9 796 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 ZNF510Q9Y2H8 683 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 SLC27A5Q9Y2P5 690 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 COL4A3Q01955 1670 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 CHD9Q3L8U1 2897 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 GFRA2O00451 464 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 TRANK1O15050 2925 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 LTBRP36941 435 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 ARPP19P56211 112 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 USP4Q13107 963 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 SMAD4Q13485 552 aaKnown RBP9.16□□□□□ -0.94
FXR1-203ENST00000445140 TAZQ16635 292 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 OR6B2Q6IFH4 312 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 TRNP1Q6NT89 227 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 NYAP1Q6ZVC0 841 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 TASP1Q9H6P5 420 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 MTMR10Q9NXD2 777 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 GMIPQ9P107 970 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 EPS15L1Q9UBC2 864 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 DNMT3BQ9UBC3 853 aaKnown RBP9.16□□□□□ -0.94
FXR1-203ENST00000445140 TJP2Q9UDY2 1190 aa9.16□□□□□ -0.94
FXR1-203ENST00000445140 DOCK4Q8N1I0 1966 aa9.15□□□□□ -0.94
FXR1-203ENST00000445140 DOCK8Q8NF50 2099 aa9.15□□□□□ -0.94
FXR1-203ENST00000445140 MDM4O15151 490 aa9.15□□□□□ -0.94
FXR1-203ENST00000445140 TBX10O75333 385 aa9.15□□□□□ -0.94
FXR1-203ENST00000445140 USP17L7P0C7H9 530 aa9.15□□□□□ -0.94
FXR1-203ENST00000445140 PRLRP16471 622 aa9.15□□□□□ -0.94
FXR1-203ENST00000445140 GBP1P32455 592 aa9.15□□□□□ -0.94
FXR1-203ENST00000445140 RDXP35241 583 aaKnown RBP9.15□□□□□ -0.94
FXR1-203ENST00000445140 RGS7P49802 495 aa9.15□□□□□ -0.94
FXR1-203ENST00000445140 LEXMQ3ZCV2 418 aa9.15□□□□□ -0.94
FXR1-203ENST00000445140 CCDC14Q49A88 953 aa9.15□□□□□ -0.94
FXR1-203ENST00000445140 ARHGAP15Q53QZ3 475 aa9.15□□□□□ -0.94
FXR1-203ENST00000445140 HECTD3Q5T447 861 aa9.15□□□□□ -0.94
FXR1-203ENST00000445140 SCAMP5Q8TAC9 235 aa9.15□□□□□ -0.94
FXR1-203ENST00000445140 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.15□□□□□ -0.94
FXR1-203ENST00000445140 SHKBP1Q8TBC3 707 aa9.15□□□□□ -0.94
FXR1-203ENST00000445140 NMUR1Q9HB89 426 aa9.15□□□□□ -0.94
FXR1-203ENST00000445140 METTL5Q9NRN9 209 aaKnown RBP9.15□□□□□ -0.94
FXR1-203ENST00000445140 ZNF500O60304 480 aaPredicted RBP9.15□□□□□ -0.95
FXR1-203ENST00000445140 RHOP08100 348 aa9.15□□□□□ -0.95
FXR1-203ENST00000445140 LCP1P13796 627 aa9.15□□□□□ -0.95
FXR1-203ENST00000445140 HOXC13P31276 330 aa9.15□□□□□ -0.95
FXR1-203ENST00000445140 SDC4P31431 198 aa9.15□□□□□ -0.95
FXR1-203ENST00000445140 RFC1P35251 1148 aaPredicted RBP9.15□□□□□ -0.95
FXR1-203ENST00000445140 FLT3P36888 993 aa9.15□□□□□ -0.95
FXR1-203ENST00000445140 CYP4A22Q5TCH4 519 aa9.15□□□□□ -0.95
FXR1-203ENST00000445140 BTBD8Q5XKL5 378 aa9.15□□□□□ -0.95
FXR1-203ENST00000445140 GAREM2Q75VX8 874 aa9.15□□□□□ -0.95
FXR1-203ENST00000445140 SCUBE3Q8IX30 993 aa9.15□□□□□ -0.95
FXR1-203ENST00000445140 MRPS31Q92665 395 aaKnown RBP9.15□□□□□ -0.95
FXR1-203ENST00000445140 OTUB2Q96DC9 234 aa9.15□□□□□ -0.95
FXR1-203ENST00000445140 ZFRQ96KR1 1074 aaKnown RBP9.15□□□□□ -0.95
FXR1-203ENST00000445140 C1orf74Q96LT6 269 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms