RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 ZNF276Q8N554 614 aa11.42□□□□□ -0.58
SF3A1-203ENST00000444440 TTC39CQ8N584 583 aa11.42□□□□□ -0.58
SF3A1-203ENST00000444440 CAMKK1Q8N5S9 505 aa11.42□□□□□ -0.58
SF3A1-203ENST00000444440 TXNDC5Q8NBS9 432 aaKnown RBP11.42□□□□□ -0.58
SF3A1-203ENST00000444440 CLEC4CQ8WTT0 213 aa11.42□□□□□ -0.58
SF3A1-203ENST00000444440 BHMTQ93088 406 aa11.42□□□□□ -0.58
SF3A1-203ENST00000444440 OTUB2Q96DC9 234 aa11.42□□□□□ -0.58
SF3A1-203ENST00000444440 NT5C1BQ96P26 610 aa11.42□□□□□ -0.58
SF3A1-203ENST00000444440 UBXN6Q9BZV1 441 aa11.42□□□□□ -0.58
SF3A1-203ENST00000444440 FAM124BQ9H5Z6 455 aaPredicted RBP11.42□□□□□ -0.58
SF3A1-203ENST00000444440 PLK2Q9NYY3 685 aa11.42□□□□□ -0.58
SF3A1-203ENST00000444440 CLIC5Q9NZA1 410 aa11.42□□□□□ -0.58
SF3A1-203ENST00000444440 RASAL2Q9UJF2 1139 aa11.42□□□□□ -0.58
SF3A1-203ENST00000444440 DNMT3LQ9UJW3 386 aa11.42□□□□□ -0.58
SF3A1-203ENST00000444440 MMP17Q9ULZ9 603 aa11.42□□□□□ -0.58
SF3A1-203ENST00000444440 PCDHB4Q9Y5E5 795 aa11.42□□□□□ -0.58
SF3A1-203ENST00000444440 CCDC163A0A0D9SF12 145 aa11.41□□□□□ -0.58
SF3A1-203ENST00000444440 YJEFN3A6XGL0 299 aa11.41□□□□□ -0.58
SF3A1-203ENST00000444440 E7ENQ6 273 aa11.41□□□□□ -0.58
SF3A1-203ENST00000444440 NEDD8-MDP1E9PL57 170 aa11.41□□□□□ -0.58
SF3A1-203ENST00000444440 AXIN1O15169 862 aa11.41□□□□□ -0.58
SF3A1-203ENST00000444440 CACNG3O60359 315 aa11.41□□□□□ -0.58
SF3A1-203ENST00000444440 RPP40O75818 363 aaKnown RBP11.41□□□□□ -0.58
SF3A1-203ENST00000444440 APBB3O95704 486 aa11.41□□□□□ -0.58
SF3A1-203ENST00000444440 APODP05090 189 aa11.41□□□□□ -0.58
SF3A1-203ENST00000444440 RETP07949 1114 aa11.41□□□□□ -0.58
SF3A1-203ENST00000444440 VDRP11473 427 aa11.41□□□□□ -0.58
SF3A1-203ENST00000444440 TYRP14679 529 aa11.41□□□□□ -0.58
SF3A1-203ENST00000444440 TRIM21P19474 475 aaKnown RBP11.41□□□□□ -0.58
SF3A1-203ENST00000444440 BCKDHBP21953 392 aa11.41□□□□□ -0.58
SF3A1-203ENST00000444440 TBXAS1P24557 533 aaPredicted RBP11.41□□□□□ -0.58
SF3A1-203ENST00000444440 CORO1AP31146 461 aaKnown RBP11.41□□□□□ -0.58
SF3A1-203ENST00000444440 PLA2G4AP47712 749 aa11.41□□□□□ -0.58
SF3A1-203ENST00000444440 RGS7P49802 495 aa11.41□□□□□ -0.58
SF3A1-203ENST00000444440 YWHAGP61981 247 aaKnown RBP eCLIP11.41□□□□□ -0.58
SF3A1-203ENST00000444440 ADIGQ0VDE8 80 aa11.41□□□□□ -0.58
SF3A1-203ENST00000444440 BST2Q10589 180 aaKnown RBP11.41□□□□□ -0.58
SF3A1-203ENST00000444440 RSPO4Q2I0M5 234 aaPredicted RBP11.41□□□□□ -0.58
SF3A1-203ENST00000444440 PMF1Q6P1K2 205 aa11.41□□□□□ -0.58
SF3A1-203ENST00000444440 LCLAT1Q6UWP7 414 aa11.41□□□□□ -0.58
SF3A1-203ENST00000444440 CEP68Q76N32 757 aa11.41□□□□□ -0.58
SF3A1-203ENST00000444440 RASSF3Q86WH2 238 aa11.41□□□□□ -0.58
SF3A1-203ENST00000444440 FRMD1Q8N878 549 aa11.41□□□□□ -0.58
SF3A1-203ENST00000444440 TERB1Q8NA31 727 aa11.41□□□□□ -0.58
SF3A1-203ENST00000444440 RBBP8NLQ8NC74 664 aaPredicted RBP11.41□□□□□ -0.58
SF3A1-203ENST00000444440 EHBP1Q8NDI1 1231 aa11.41□□□□□ -0.58
SF3A1-203ENST00000444440 MDGA1Q8NFP4 955 aa11.41□□□□□ -0.58
SF3A1-203ENST00000444440 ACDQ96AP0 544 aa11.41□□□□□ -0.58
SF3A1-203ENST00000444440 CNOT6LQ96LI5 555 aaKnown RBP11.41□□□□□ -0.58
SF3A1-203ENST00000444440 IPO9Q96P70 1041 aaKnown RBP11.41□□□□□ -0.58
SF3A1-203ENST00000444440 ACOX2Q99424 681 aa11.41□□□□□ -0.58
SF3A1-203ENST00000444440 INTS2Q9H0H0 1204 aaKnown RBP11.41□□□□□ -0.58
SF3A1-203ENST00000444440 SMOC1Q9H4F8 434 aa11.41□□□□□ -0.58
SF3A1-203ENST00000444440 ACP6Q9NPH0 428 aa11.41□□□□□ -0.58
SF3A1-203ENST00000444440 DLL3Q9NYJ7 618 aa11.41□□□□□ -0.58
SF3A1-203ENST00000444440 EBF1Q9UH73 591 aa11.41□□□□□ -0.58
SF3A1-203ENST00000444440 AJAP1Q9UKB5 411 aaPredicted RBP11.41□□□□□ -0.58
SF3A1-203ENST00000444440 GMEB2Q9UKD1 530 aa11.41□□□□□ -0.58
SF3A1-203ENST00000444440 RAB23Q9ULC3 237 aa11.41□□□□□ -0.58
SF3A1-203ENST00000444440 USP18Q9UMW8 372 aa11.41□□□□□ -0.58
SF3A1-203ENST00000444440 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.41□□□□□ -0.58
SF3A1-203ENST00000444440 GON4LQ3T8J9 2241 aa11.41□□□□□ -0.58
SF3A1-203ENST00000444440 TMEM131Q92545 1883 aa11.4□□□□□ -0.58
SF3A1-203ENST00000444440 PRRT4C9JH25 899 aa11.4□□□□□ -0.58
SF3A1-203ENST00000444440 P4HA2O15460 535 aa11.4□□□□□ -0.58
SF3A1-203ENST00000444440 GDF9O60383 454 aa11.4□□□□□ -0.58
SF3A1-203ENST00000444440 ZBED1O96006 694 aa11.4□□□□□ -0.58
SF3A1-203ENST00000444440 AFPP02771 609 aaKnown RBP11.4□□□□□ -0.58
SF3A1-203ENST00000444440 CISD3P0C7P0 127 aa11.4□□□□□ -0.58
SF3A1-203ENST00000444440 CCDC192P0DO97 292 aa11.4□□□□□ -0.58
SF3A1-203ENST00000444440 RALAP11233 206 aa11.4□□□□□ -0.58
SF3A1-203ENST00000444440 GRIA2P42262 883 aa11.4□□□□□ -0.58
SF3A1-203ENST00000444440 PSEN1P49768 467 aa11.4□□□□□ -0.58
SF3A1-203ENST00000444440 DGKEP52429 567 aa11.4□□□□□ -0.58
SF3A1-203ENST00000444440 DAOAP59103 153 aa11.4□□□□□ -0.58
SF3A1-203ENST00000444440 MRPS21P82921 87 aaKnown RBP11.4□□□□□ -0.58
SF3A1-203ENST00000444440 NUMA1Q14980 2115 aa11.4□□□□□ -0.58
SF3A1-203ENST00000444440 CRY1Q16526 586 aa11.4□□□□□ -0.58
SF3A1-203ENST00000444440 PLK5Q496M5 336 aa11.4□□□□□ -0.58
SF3A1-203ENST00000444440 FYB2Q5VWT5 728 aa11.4□□□□□ -0.58
SF3A1-203ENST00000444440 EGFLAMQ63HQ2 1017 aa11.4□□□□□ -0.58
SF3A1-203ENST00000444440 ANO7Q6IWH7 933 aa11.4□□□□□ -0.58
SF3A1-203ENST00000444440 TRIML1Q8N9V2 468 aa11.4□□□□□ -0.58
SF3A1-203ENST00000444440 SLC35F5Q8WV83 523 aa11.4□□□□□ -0.58
SF3A1-203ENST00000444440 EDEM1Q92611 657 aa11.4□□□□□ -0.58
SF3A1-203ENST00000444440 SECISBP2LQ93073 1101 aaKnown RBP11.4□□□□□ -0.58
SF3A1-203ENST00000444440 EXOC4Q96A65 974 aa11.4□□□□□ -0.58
SF3A1-203ENST00000444440 ERLEC1Q96DZ1 483 aa11.4□□□□□ -0.58
SF3A1-203ENST00000444440 GBP4Q96PP9 640 aa11.4□□□□□ -0.58
SF3A1-203ENST00000444440 CRACR2AQ9BSW2 395 aa11.4□□□□□ -0.58
SF3A1-203ENST00000444440 BBS2Q9BXC9 721 aa11.4□□□□□ -0.58
SF3A1-203ENST00000444440 DUSP15Q9H1R2 295 aaPredicted RBP11.4□□□□□ -0.58
SF3A1-203ENST00000444440 ARRDC1-AS1Q9H2J1 176 aa11.4□□□□□ -0.58
SF3A1-203ENST00000444440 CLSTN2Q9H4D0 955 aa11.4□□□□□ -0.58
SF3A1-203ENST00000444440 RXFP3Q9NSD7 469 aa11.4□□□□□ -0.58
SF3A1-203ENST00000444440 SEMA4GQ9NTN9 838 aa11.4□□□□□ -0.58
SF3A1-203ENST00000444440 DNAJC17Q9NVM6 304 aaKnown RBP11.4□□□□□ -0.58
SF3A1-203ENST00000444440 MARK1Q9P0L2 795 aa11.4□□□□□ -0.58
SF3A1-203ENST00000444440 SFMBT1Q9UHJ3 866 aa11.4□□□□□ -0.58
SF3A1-203ENST00000444440 RWDD2AQ9UIY3 292 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms