RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 BSPRYQ5W0U4 402 aa22.89■■□□□ 1.25
TRAF4-205ENST00000444415 SFTPA1Q8IWL2 248 aa22.89■■□□□ 1.25
TRAF4-205ENST00000444415 SIX6OS1Q8N1H7 587 aa22.89■■□□□ 1.25
TRAF4-205ENST00000444415 ARHGAP18Q8N392 663 aa22.89■■□□□ 1.25
TRAF4-205ENST00000444415 EDEM1Q92611 657 aa22.89■■□□□ 1.25
TRAF4-205ENST00000444415 ATOH1Q92858 354 aaPredicted RBP22.89■■□□□ 1.25
TRAF4-205ENST00000444415 P2RY13Q9BPV8 354 aa22.89■■□□□ 1.25
TRAF4-205ENST00000444415 SLC4A5Q9BY07 1137 aa22.89■■□□□ 1.25
TRAF4-205ENST00000444415 TBC1D14Q9P2M4 693 aa22.89■■□□□ 1.25
TRAF4-205ENST00000444415 RASAL2Q9UJF2 1139 aa22.89■■□□□ 1.25
TRAF4-205ENST00000444415 SIK3Q9Y2K2 1263 aa22.89■■□□□ 1.25
TRAF4-205ENST00000444415 LRRC10BA6NIK2 292 aa22.88■■□□□ 1.25
TRAF4-205ENST00000444415 CHRM1P11229 460 aaPredicted RBP22.88■■□□□ 1.25
TRAF4-205ENST00000444415 DGKKQ5KSL6 1271 aa22.88■■□□□ 1.25
TRAF4-205ENST00000444415 TSSK4Q6SA08 328 aa22.88■■□□□ 1.25
TRAF4-205ENST00000444415 MAMSTRQ6ZN01 415 aa22.88■■□□□ 1.25
TRAF4-205ENST00000444415 TMEM25Q86YD3 366 aa22.88■■□□□ 1.25
TRAF4-205ENST00000444415 OTUB2Q96DC9 234 aa22.88■■□□□ 1.25
TRAF4-205ENST00000444415 BPIFA3Q9BQP9 254 aa22.88■■□□□ 1.25
TRAF4-205ENST00000444415 PLCB1Q9NQ66 1216 aa22.88■■□□□ 1.25
TRAF4-205ENST00000444415 ZFHX2Q9C0A1 2572 aaPredicted RBP22.88■■□□□ 1.25
TRAF4-205ENST00000444415 MYO18AQ92614 2054 aaKnown RBP22.88■■□□□ 1.25
TRAF4-205ENST00000444415 FYNP06241 537 aa22.87■■□□□ 1.25
TRAF4-205ENST00000444415 SLC6A11P48066 632 aa22.87■■□□□ 1.25
TRAF4-205ENST00000444415 SATB1Q01826 763 aa22.87■■□□□ 1.25
TRAF4-205ENST00000444415 LRRC32Q14392 662 aa22.87■■□□□ 1.25
TRAF4-205ENST00000444415 SMYD5Q6GMV2 418 aa22.87■■□□□ 1.25
TRAF4-205ENST00000444415 PHTF2Q8N3S3 785 aa22.87■■□□□ 1.25
TRAF4-205ENST00000444415 CD101Q93033 1021 aa22.87■■□□□ 1.25
TRAF4-205ENST00000444415 PIWIL1Q96J94 861 aaKnown RBP22.87■■□□□ 1.25
TRAF4-205ENST00000444415 MARCH2Q9P0N8 246 aa22.87■■□□□ 1.25
TRAF4-205ENST00000444415 PCDHGC3Q9UN70 934 aa22.87■■□□□ 1.25
TRAF4-205ENST00000444415 LAMTOR5O43504 91 aa22.86■■□□□ 1.25
TRAF4-205ENST00000444415 NBL1P41271 181 aa22.86■■□□□ 1.25
TRAF4-205ENST00000444415 PDCLQ13371 301 aa22.86■■□□□ 1.25
TRAF4-205ENST00000444415 RAPGEF1Q13905 1077 aa22.86■■□□□ 1.25
TRAF4-205ENST00000444415 BTBD8Q5XKL5 378 aa22.86■■□□□ 1.25
TRAF4-205ENST00000444415 PASD1Q8IV76 773 aa22.86■■□□□ 1.25
TRAF4-205ENST00000444415 ETFBKMTQ8IXQ9 262 aa22.86■■□□□ 1.25
TRAF4-205ENST00000444415 STK32AQ8WU08 396 aa22.86■■□□□ 1.25
TRAF4-205ENST00000444415 IRGQQ8WZA9 623 aa22.86■■□□□ 1.25
TRAF4-205ENST00000444415 NELL1Q92832 810 aa22.86■■□□□ 1.25
TRAF4-205ENST00000444415 CDK5RAP1Q96SZ6 601 aaKnown RBP22.86■■□□□ 1.25
TRAF4-205ENST00000444415 IER2Q9BTL4 223 aa22.86■■□□□ 1.25
TRAF4-205ENST00000444415 MIS12Q9H081 205 aa22.86■■□□□ 1.25
TRAF4-205ENST00000444415 SPHK2Q9NRA0 654 aa22.86■■□□□ 1.25
TRAF4-205ENST00000444415 SFMBT1Q9UHJ3 866 aa22.86■■□□□ 1.25
TRAF4-205ENST00000444415 FBXO4Q9UKT5 387 aa22.86■■□□□ 1.25
TRAF4-205ENST00000444415 SYCE3A1L190 88 aa22.85■■□□□ 1.25
TRAF4-205ENST00000444415 LGALS16A8MUM7 142 aa22.85■■□□□ 1.25
TRAF4-205ENST00000444415 E5RJQ4 531 aa22.85■■□□□ 1.25
TRAF4-205ENST00000444415 F8VZ95 297 aa22.85■■□□□ 1.25
TRAF4-205ENST00000444415 PAPSS1O43252 624 aaPredicted RBP22.85■■□□□ 1.25
TRAF4-205ENST00000444415 MED7O43513 233 aa22.85■■□□□ 1.25
TRAF4-205ENST00000444415 HMBSP08397 361 aa22.85■■□□□ 1.25
TRAF4-205ENST00000444415 ADH5P11766 374 aa22.85■■□□□ 1.25
TRAF4-205ENST00000444415 GRSF1Q12849 480 aaKnown RBP eCLIP22.85■■□□□ 1.25
TRAF4-205ENST00000444415 NR1H3Q13133 447 aa22.85■■□□□ 1.25
TRAF4-205ENST00000444415 TADA2BQ86TJ2 420 aa22.85■■□□□ 1.25
TRAF4-205ENST00000444415 TMEM110Q86TL2 294 aa22.85■■□□□ 1.25
TRAF4-205ENST00000444415 SCUBE3Q8IX30 993 aa22.85■■□□□ 1.25
TRAF4-205ENST00000444415 SPEM1Q8N4L4 309 aa22.85■■□□□ 1.25
TRAF4-205ENST00000444415 POLR3BQ9NW08 1133 aaPredicted RBP22.85■■□□□ 1.25
TRAF4-205ENST00000444415 GPR179Q6PRD1 2367 aa22.85■■□□□ 1.25
TRAF4-205ENST00000444415 HOXC11O43248 304 aaPredicted RBP22.85■■□□□ 1.25
TRAF4-205ENST00000444415 RNF40O75150 1001 aa22.85■■□□□ 1.25
TRAF4-205ENST00000444415 DRD1P21728 446 aa22.85■■□□□ 1.25
TRAF4-205ENST00000444415 AMPD2Q01433 879 aa22.85■■□□□ 1.25
TRAF4-205ENST00000444415 CSTF1Q05048 431 aaKnown RBP22.85■■□□□ 1.25
TRAF4-205ENST00000444415 IQCB1Q15051 598 aa22.85■■□□□ 1.25
TRAF4-205ENST00000444415 MSANTD2Q6P1R3 559 aa22.85■■□□□ 1.25
TRAF4-205ENST00000444415 RSRC2Q7L4I2 434 aaKnown RBP22.85■■□□□ 1.25
TRAF4-205ENST00000444415 FMNL3Q8IVF7 1028 aa22.85■■□□□ 1.25
TRAF4-205ENST00000444415 SYNPOQ8N3V7 929 aa22.85■■□□□ 1.25
TRAF4-205ENST00000444415 DDX1Q92499 740 aaKnown RBP22.85■■□□□ 1.25
TRAF4-205ENST00000444415 CPXM1Q96SM3 734 aa22.85■■□□□ 1.25
TRAF4-205ENST00000444415 IRF2BPLQ9H1B7 796 aa22.85■■□□□ 1.25
TRAF4-205ENST00000444415 ST7Q9NRC1 585 aa22.85■■□□□ 1.25
TRAF4-205ENST00000444415 ABCC13Q9NSE7 274 aa22.85■■□□□ 1.25
TRAF4-205ENST00000444415 FAM207AQ9NSI2 230 aaPredicted RBP22.85■■□□□ 1.25
TRAF4-205ENST00000444415 RIF1Q5UIP0 2472 aaKnown RBP22.84■■□□□ 1.25
TRAF4-205ENST00000444415 SLC12A8A0AV02 714 aa22.84■■□□□ 1.25
TRAF4-205ENST00000444415 K7EQS6 105 aa22.84■■□□□ 1.25
TRAF4-205ENST00000444415 K7ESF4 209 aa22.84■■□□□ 1.25
TRAF4-205ENST00000444415 TRIM24O15164 1050 aa22.84■■□□□ 1.25
TRAF4-205ENST00000444415 MSI1O43347 362 aaKnown RBP22.84■■□□□ 1.25
TRAF4-205ENST00000444415 ADH1CP00326 375 aa22.84■■□□□ 1.25
TRAF4-205ENST00000444415 LTFP02788 710 aa22.84■■□□□ 1.25
TRAF4-205ENST00000444415 JAM2P57087 298 aa22.84■■□□□ 1.25
TRAF4-205ENST00000444415 COG7P83436 770 aa22.84■■□□□ 1.25
TRAF4-205ENST00000444415 PTK2Q05397 1052 aa22.84■■□□□ 1.25
TRAF4-205ENST00000444415 SYCP1Q15431 976 aa22.84■■□□□ 1.25
TRAF4-205ENST00000444415 TRIP4Q15650 581 aaPredicted RBP22.84■■□□□ 1.25
TRAF4-205ENST00000444415 ZNF528Q3MIS6 628 aa22.84■■□□□ 1.25
TRAF4-205ENST00000444415 C1orf131Q8NDD1 294 aaKnown RBP22.84■■□□□ 1.25
TRAF4-205ENST00000444415 STK33Q9BYT3 514 aa22.84■■□□□ 1.25
TRAF4-205ENST00000444415 R4GN57 208 aa22.84■■□□□ 1.25
TRAF4-205ENST00000444415 EML5Q05BV3 1969 aa22.83■■□□□ 1.25
TRAF4-205ENST00000444415 PROB1E7EW31 1015 aa22.83■■□□□ 1.25
TRAF4-205ENST00000444415 FBXO21O94952 628 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms