RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 FMNL3Q8IVF7 1028 aa16.77■□□□□ 0.28
USP39-205ENST00000442708 EDAQ92838 391 aa16.77■□□□□ 0.28
USP39-205ENST00000442708 C18orf8Q96DM3 657 aa16.77■□□□□ 0.28
USP39-205ENST00000442708 DNAJC7Q99615 494 aa16.77■□□□□ 0.28
USP39-205ENST00000442708 FAM83CQ9BQN1 747 aa16.77■□□□□ 0.28
USP39-205ENST00000442708 NACA2Q9H009 215 aa16.77■□□□□ 0.28
USP39-205ENST00000442708 NUCKS1Q9H1E3 243 aaKnown RBP16.77■□□□□ 0.28
USP39-205ENST00000442708 LINC00597Q9H2U6 94 aa16.77■□□□□ 0.28
USP39-205ENST00000442708 SYNCQ9H7C4 482 aa16.77■□□□□ 0.28
USP39-205ENST00000442708 WNT6Q9Y6F9 365 aa16.77■□□□□ 0.28
USP39-205ENST00000442708 TECTAO75443 2155 aa16.77■□□□□ 0.27
USP39-205ENST00000442708 CHADO15335 359 aa16.76■□□□□ 0.27
USP39-205ENST00000442708 MSI1O43347 362 aaKnown RBP16.76■□□□□ 0.27
USP39-205ENST00000442708 MFAP3LO75121 409 aa16.76■□□□□ 0.27
USP39-205ENST00000442708 SERPING1P05155 500 aa16.76■□□□□ 0.27
USP39-205ENST00000442708 ARSAP15289 507 aa16.76■□□□□ 0.27
USP39-205ENST00000442708 PLA2G5P39877 138 aa16.76■□□□□ 0.27
USP39-205ENST00000442708 YWHAZP63104 245 aaKnown RBP16.76■□□□□ 0.27
USP39-205ENST00000442708 TNK2Q07912 1038 aa16.76■□□□□ 0.27
USP39-205ENST00000442708 TRNP1Q6NT89 227 aa16.76■□□□□ 0.27
USP39-205ENST00000442708 MON1BQ7L1V2 547 aa16.76■□□□□ 0.27
USP39-205ENST00000442708 PHF13Q86YI8 300 aaPredicted RBP16.76■□□□□ 0.27
USP39-205ENST00000442708 UBALD2Q8IYN6 164 aa16.76■□□□□ 0.27
USP39-205ENST00000442708 IPO4Q8TEX9 1081 aaKnown RBP16.76■□□□□ 0.27
USP39-205ENST00000442708 SLC2A13Q96QE2 648 aa16.76■□□□□ 0.27
USP39-205ENST00000442708 C11orf70Q9BRQ4 267 aa16.76■□□□□ 0.27
USP39-205ENST00000442708 BRD9Q9H8M2 597 aa16.76■□□□□ 0.27
USP39-205ENST00000442708 HPS4Q9NQG7 708 aa16.76■□□□□ 0.27
USP39-205ENST00000442708 MARCH2Q9P0N8 246 aa16.76■□□□□ 0.27
USP39-205ENST00000442708 ARHGAP20Q9P2F6 1191 aa16.76■□□□□ 0.27
USP39-205ENST00000442708 MYOFQ9NZM1 2061 aa16.75■□□□□ 0.27
USP39-205ENST00000442708 SLC12A8A0AV02 714 aa16.75■□□□□ 0.27
USP39-205ENST00000442708 OTOL1A6NHN0 477 aaPredicted RBP16.75■□□□□ 0.27
USP39-205ENST00000442708 TMCO5BA8MYB1 307 aa16.75■□□□□ 0.27
USP39-205ENST00000442708 GOLGA8SH3BPF8 625 aa16.75■□□□□ 0.27
USP39-205ENST00000442708 ZNF263O14978 683 aa16.75■□□□□ 0.27
USP39-205ENST00000442708 SART1O43290 800 aaKnown RBP16.75■□□□□ 0.27
USP39-205ENST00000442708 STC2O76061 302 aa16.75■□□□□ 0.27
USP39-205ENST00000442708 GJB6O95452 261 aa16.75■□□□□ 0.27
USP39-205ENST00000442708 KLKB1P03952 638 aa16.75■□□□□ 0.27
USP39-205ENST00000442708 HMBSP08397 361 aa16.75■□□□□ 0.27
USP39-205ENST00000442708 NCAM1P13591 858 aa16.75■□□□□ 0.27
USP39-205ENST00000442708 NSFP46459 744 aaKnown RBP16.75■□□□□ 0.27
USP39-205ENST00000442708 ARHGAP29Q52LW3 1261 aa16.75■□□□□ 0.27
USP39-205ENST00000442708 EFHC1Q5JVL4 640 aa16.75■□□□□ 0.27
USP39-205ENST00000442708 ACAD10Q6JQN1 1059 aa16.75■□□□□ 0.27
USP39-205ENST00000442708 BEND5Q7L4P6 421 aa16.75■□□□□ 0.27
USP39-205ENST00000442708 SLC26A9Q7LBE3 791 aa16.75■□□□□ 0.27
USP39-205ENST00000442708 TADA2BQ86TJ2 420 aa16.75■□□□□ 0.27
USP39-205ENST00000442708 YAF2Q8IY57 180 aa16.75■□□□□ 0.27
USP39-205ENST00000442708 DEFB106AQ8N104 65 aa16.75■□□□□ 0.27
USP39-205ENST00000442708 OR8K1Q8NGG5 319 aa16.75■□□□□ 0.27
USP39-205ENST00000442708 TTC8Q8TAM2 541 aa16.75■□□□□ 0.27
USP39-205ENST00000442708 ADAM32Q8TC27 787 aa16.75■□□□□ 0.27
USP39-205ENST00000442708 DQX1Q8TE96 717 aaKnown RBP16.75■□□□□ 0.27
USP39-205ENST00000442708 RNF139Q8WU17 664 aa16.75■□□□□ 0.27
USP39-205ENST00000442708 CDK5RAP1Q96SZ6 601 aaKnown RBP16.75■□□□□ 0.27
USP39-205ENST00000442708 ADAM33Q9BZ11 813 aa16.75■□□□□ 0.27
USP39-205ENST00000442708 POPDC2Q9HBU9 364 aa16.75■□□□□ 0.27
USP39-205ENST00000442708 OLA1Q9NTK5 396 aaKnown RBP16.75■□□□□ 0.27
USP39-205ENST00000442708 ABHD10Q9NUJ1 306 aa16.75■□□□□ 0.27
USP39-205ENST00000442708 ASNSD1Q9NWL6 643 aa16.75■□□□□ 0.27
USP39-205ENST00000442708 E2F8A0AVK6 867 aa16.74■□□□□ 0.27
USP39-205ENST00000442708 KRBA1A5PL33 1030 aa16.74■□□□□ 0.27
USP39-205ENST00000442708 SHISA7A6NL88 538 aa16.74■□□□□ 0.27
USP39-205ENST00000442708 GLI1P08151 1106 aa16.74■□□□□ 0.27
USP39-205ENST00000442708 ALADP13716 330 aa16.74■□□□□ 0.27
USP39-205ENST00000442708 SNX16P57768 344 aa16.74■□□□□ 0.27
USP39-205ENST00000442708 EML3Q32P44 896 aa16.74■□□□□ 0.27
USP39-205ENST00000442708 TDRD12Q587J7 1177 aaKnown RBP16.74■□□□□ 0.27
USP39-205ENST00000442708 TAC4Q86UU9 113 aa16.74■□□□□ 0.27
USP39-205ENST00000442708 DDX42Q86XP3 938 aaKnown RBP eCLIP16.74■□□□□ 0.27
USP39-205ENST00000442708 ZDHHC17Q8IUH5 632 aa16.74■□□□□ 0.27
USP39-205ENST00000442708 TC2NQ8N9U0 490 aa16.74■□□□□ 0.27
USP39-205ENST00000442708 OSCP1Q8WVF1 389 aa16.74■□□□□ 0.27
USP39-205ENST00000442708 GOLGA1Q92805 767 aa16.74■□□□□ 0.27
USP39-205ENST00000442708 EBF3Q9H4W6 596 aa16.74■□□□□ 0.27
USP39-205ENST00000442708 THG1LQ9NWX6 298 aaKnown RBP16.74■□□□□ 0.27
USP39-205ENST00000442708 DUS2Q9NX74 493 aaKnown RBP16.74■□□□□ 0.27
USP39-205ENST00000442708 GTSE1Q9NYZ3 720 aa16.74■□□□□ 0.27
USP39-205ENST00000442708 ADAM22Q9P0K1 906 aa16.74■□□□□ 0.27
USP39-205ENST00000442708 TMEM59LQ9UK28 342 aa16.74■□□□□ 0.27
USP39-205ENST00000442708 CA14Q9ULX7 337 aa16.74■□□□□ 0.27
USP39-205ENST00000442708 A0A087X0T9 212 aa16.73■□□□□ 0.27
USP39-205ENST00000442708 TCRBV5S1A1TA0A578 114 aa16.73■□□□□ 0.27
USP39-205ENST00000442708 AKR1B15C9JRZ8 316 aaPredicted RBP16.73■□□□□ 0.27
USP39-205ENST00000442708 HSF2BPO75031 334 aa16.73■□□□□ 0.27
USP39-205ENST00000442708 DAB1O75553 588 aa16.73■□□□□ 0.27
USP39-205ENST00000442708 ADCY5O95622 1261 aa16.73■□□□□ 0.27
USP39-205ENST00000442708 FAM228BP0C875 321 aa16.73■□□□□ 0.27
USP39-205ENST00000442708 TFE3P19532 575 aaPredicted RBP16.73■□□□□ 0.27
USP39-205ENST00000442708 SCNN1AP37088 669 aa16.73■□□□□ 0.27
USP39-205ENST00000442708 EIF4A3P38919 411 aaKnown RBP16.73■□□□□ 0.27
USP39-205ENST00000442708 RNASE9P60153 205 aaKnown RBP16.73■□□□□ 0.27
USP39-205ENST00000442708 SIGLEC14Q08ET2 396 aa16.73■□□□□ 0.27
USP39-205ENST00000442708 TRIP4Q15650 581 aaPredicted RBP16.73■□□□□ 0.27
USP39-205ENST00000442708 DCAF6Q58WW2 860 aa16.73■□□□□ 0.27
USP39-205ENST00000442708 FAM102AQ5T9C2 384 aaPredicted RBP16.73■□□□□ 0.27
USP39-205ENST00000442708 OTUD1Q5VV17 481 aaPredicted RBP16.73■□□□□ 0.27
USP39-205ENST00000442708 Q6ZNB5 142 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms