RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 FAM172AQ8WUF8 416 aa10.62□□□□□ -0.71
LIN54-202ENST00000442461 TCF12Q99081 682 aa10.62□□□□□ -0.71
LIN54-202ENST00000442461 SEPHS2Q99611 448 aa10.62□□□□□ -0.71
LIN54-202ENST00000442461 TMEM121Q9BTD3 319 aa10.62□□□□□ -0.71
LIN54-202ENST00000442461 EHD1Q9H4M9 534 aa10.62□□□□□ -0.71
LIN54-202ENST00000442461 ATPIF1Q9UII2 106 aa10.62□□□□□ -0.71
LIN54-202ENST00000442461 SYNPO2Q9UMS6 1093 aa10.62□□□□□ -0.71
LIN54-202ENST00000442461 PMF1-BGLAPU3KQ54 211 aa10.62□□□□□ -0.71
LIN54-202ENST00000442461 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.62□□□□□ -0.71
LIN54-202ENST00000442461 CCDC78A2IDD5 438 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 EFCAB10A6NFE3 127 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 SPDYE16A6NNV3 312 aaPredicted RBP10.61□□□□□ -0.71
LIN54-202ENST00000442461 MRASO14807 208 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 H6PDO95479 791 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 HSMCR30P0CW71 290 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 DDX5P17844 614 aaKnown RBP10.61□□□□□ -0.71
LIN54-202ENST00000442461 KRT20P35900 424 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 GP5P40197 560 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 ENTPD1P49961 510 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 ABATP80404 500 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 SCRN3Q0VDG4 424 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 UBAP2LQ14157 1087 aaKnown RBP10.61□□□□□ -0.71
LIN54-202ENST00000442461 SURF1Q15526 300 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 DGKDQ16760 1214 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 CYP51A1Q16850 503 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 RABL6Q3YEC7 729 aaPredicted RBP10.61□□□□□ -0.71
LIN54-202ENST00000442461 LDLRAP1Q5SW96 308 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 CYP4A22Q5TCH4 519 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 CCSAPQ6IQ19 270 aaPredicted RBP10.61□□□□□ -0.71
LIN54-202ENST00000442461 PPP1R18Q6NYC8 613 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 KYAT3Q6YP21 454 aaKnown RBP10.61□□□□□ -0.71
LIN54-202ENST00000442461 KCTD1Q719H9 257 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 KRT73Q86Y46 540 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 GATAD2AQ86YP4 633 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 MYO1HQ8N1T3 1032 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 CENPSQ8N2Z9 138 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 SPATA20Q8TB22 786 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 BAP1Q92560 729 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 HEXIM2Q96MH2 286 aaKnown RBP10.61□□□□□ -0.71
LIN54-202ENST00000442461 MCEEQ96PE7 176 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 SMARCAD1Q9H4L7 1026 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 CHST7Q9NS84 486 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 FAIMQ9NVQ4 179 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 H3BSA7 217 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 EPHB6O15197 1021 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 UBDO15205 165 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 PRPF4O43172 522 aaKnown RBP eCLIP10.61□□□□□ -0.71
LIN54-202ENST00000442461 TOMM70O94826 608 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 IL2RBP14784 551 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 STAT3P40763 770 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 PRKCIP41743 596 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 ELK3P41970 407 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 RPL26P61254 145 aaKnown RBP10.61□□□□□ -0.71
LIN54-202ENST00000442461 CRTC3Q6UUV7 619 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 PRR23CQ6ZRP0 262 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 ZNF677Q86XU0 584 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 ALLCQ8N6M5 410 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 KIAA0895Q8NCT3 520 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 SPOCK2Q92563 424 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 C19orf60Q96EN9 201 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 NSMCE2Q96MF7 247 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 YIPF2Q9BWQ6 316 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 TEX12Q9BXU0 123 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 ING3Q9NXR8 418 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 ANKARQ7Z5J8 1434 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 JCADQ9P266 1359 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 RGSL1A5PLK6 1076 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 ANKRD33BA6NCL7 494 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 TRIM38O00635 465 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 TNPO2O14787 897 aaKnown RBP10.61□□□□□ -0.71
LIN54-202ENST00000442461 ZNF263O14978 683 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 TGDSO95455 350 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 FYNP06241 537 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 QARSP47897 775 aaKnown RBP10.61□□□□□ -0.71
LIN54-202ENST00000442461 SEPHS1P49903 392 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 FXR2P51116 673 aaKnown RBP eCLIP10.61□□□□□ -0.71
LIN54-202ENST00000442461 GNG2P59768 71 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 RPS8P62241 208 aaKnown RBP10.61□□□□□ -0.71
LIN54-202ENST00000442461 SPDYAQ5MJ70 313 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 ARHGAP17Q68EM7 881 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 ZDHHC13Q8IUH4 622 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 LRRC49Q8IUZ0 686 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 NARS2Q96I59 477 aaKnown RBP10.61□□□□□ -0.71
LIN54-202ENST00000442461 CCDC17Q96LX7 622 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 FAM213AQ9BRX8 229 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 C17orf80Q9BSJ5 609 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 NAT9Q9BTE0 207 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 PRDM16Q9HAZ2 1276 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 VTA1Q9NP79 307 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 HPS4Q9NQG7 708 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 ZNF224Q9NZL3 707 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 EMC3Q9P0I2 261 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 RAPGEFL1Q9UHV5 662 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 SLC39A10Q9ULF5 831 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 RPS6KL1Q9Y6S9 549 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 TRIM13O60858 407 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 ZMPSTE24O75844 475 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 PROSCO94903 275 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 NME5P56597 212 aa10.61□□□□□ -0.71
LIN54-202ENST00000442461 NME3Q13232 169 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms