RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 DDX23Q9BUQ8 820 aaKnown RBP8.42□□□□□ -1.06
CCDC39-201ENST00000442201 ANKZF1Q9H8Y5 726 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 ZWILCHQ9H900 591 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 RC3H2Q9HBD1 1191 aaKnown RBP8.42□□□□□ -1.06
CCDC39-201ENST00000442201 PCSK1NQ9UHG2 260 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 USP18Q9UMW8 372 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 PCDHB5Q9Y5E4 795 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 LRRD1A4D1F6 860 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 FSCN2O14926 492 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 PRPSAP2O60256 369 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 ZBED1O96006 694 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 LAG3P18627 525 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 CYP2F1P24903 491 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 MATKP42679 507 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 CCT5P48643 541 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 RABGGTBP53611 331 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 ARPP19P56211 112 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 SH3PXD2AQ5TCZ1 1133 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 TXNRD3NBQ6F5E7 133 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 KIAA1841Q6NSI8 718 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 VSTM1Q6UX27 236 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 ZNF365Q70YC5 407 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 GPRIN1Q7Z2K8 1008 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 SCN4BQ8IWT1 228 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 NDRG1Q92597 394 aaKnown RBP8.42□□□□□ -1.06
CCDC39-201ENST00000442201 TMEM169Q96HH4 297 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 OSBPL8Q9BZF1 889 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 KLHL11Q9NVR0 708 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 PCDH10Q9P2E7 1040 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 GGA2Q9UJY4 613 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 TARSL2A2RTX5 802 aaKnown RBP8.42□□□□□ -1.06
CCDC39-201ENST00000442201 PI4K2BG5E9Z4 385 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 DAB1O75553 588 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 SYF2O95926 243 aaKnown RBP8.42□□□□□ -1.06
CCDC39-201ENST00000442201 ZNF24P17028 368 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 IL1R2P27930 398 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 SLC8A1P32418 973 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 NOS2P35228 1153 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 COPS2P61201 443 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 SMARCB1Q12824 385 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 LLGL1Q15334 1064 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 SCYL2Q6P3W7 929 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 SLC30A9Q6PML9 568 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 C16orf59Q7L2K0 433 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 DEFB106AQ8N104 65 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 DDX47Q9H0S4 455 aaKnown RBP8.42□□□□□ -1.06
CCDC39-201ENST00000442201 SLITRK6Q9H5Y7 841 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 POPDC2Q9HBU9 364 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 STAP1Q9ULZ2 295 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 NR2E1Q9Y466 385 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 CAPN9O14815 690 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 TRUB2O95900 331 aaKnown RBP8.41□□□□□ -1.06
CCDC39-201ENST00000442201 USP17L7P0C7H9 530 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 RALAP11233 206 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 ACTN3Q08043 901 aaPredicted RBP8.41□□□□□ -1.06
CCDC39-201ENST00000442201 GPR17Q13304 367 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 TMED1Q13445 227 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 NAA25Q14CX7 972 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 SMTNL2Q2TAL5 461 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 BOLA3Q53S33 107 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 DCAF6Q58WW2 860 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 KCNT1Q5JUK3 1230 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 THEMIS2Q5TEJ8 643 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 CAPRIN2Q6IMN6 1127 aaKnown RBP8.41□□□□□ -1.06
CCDC39-201ENST00000442201 TAS1R1Q7RTX1 841 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 C7orf61Q8IZ16 206 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 SLC39A11Q8N1S5 342 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 SNRNP27Q8WVK2 155 aaKnown RBP8.41□□□□□ -1.06
CCDC39-201ENST00000442201 RIN2Q8WYP3 895 aaPredicted RBP8.41□□□□□ -1.06
CCDC39-201ENST00000442201 IRGQQ8WZA9 623 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 ACSF2Q96CM8 615 aaPredicted RBP8.41□□□□□ -1.06
CCDC39-201ENST00000442201 PGLYRP2Q96PD5 576 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 HEMGNQ9BXL5 484 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 MICAL3Q7RTP6 2002 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 YJEFN3A6XGL0 299 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 E7ENQ6 273 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 TBC1D4O60343 1298 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 EFEMP2O95967 443 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 LTFP02788 710 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 RARAP10276 462 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 MCM3P25205 808 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 MAGEA11P43364 429 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 SLMAPQ14BN4 828 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 SNCBQ16143 134 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 SLC25A52Q3SY17 297 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 PM20D1Q6GTS8 502 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 PSRC1Q6PGN9 363 aaPredicted RBP8.41□□□□□ -1.06
CCDC39-201ENST00000442201 PRSS55Q6UWB4 352 aaPredicted RBP8.41□□□□□ -1.06
CCDC39-201ENST00000442201 MFSD7Q6UXD7 560 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 SPOCD1Q6ZMY3 1216 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 STRADAQ7RTN6 431 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 MAATS1Q7Z4T9 603 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 SCML4Q8N228 414 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 PRELID2Q8N945 189 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 ATAD1Q8NBU5 361 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 SPPL2BQ8TCT7 592 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 RAPGEF5Q92565 580 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 MAGOHBQ96A72 148 aaKnown RBP8.41□□□□□ -1.06
CCDC39-201ENST00000442201 SLITRK1Q96PX8 696 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 PNKPQ96T60 521 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms