RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 MCCD1P59942 119 aaPredicted RBP8.19□□□□□ -1.1
CD44-211ENST00000442151 CREB5Q02930 508 aa8.19□□□□□ -1.1
CD44-211ENST00000442151 SRSF5Q13243 272 aaKnown RBP8.19□□□□□ -1.1
CD44-211ENST00000442151 COBLL1Q53SF7 1204 aa8.19□□□□□ -1.1
CD44-211ENST00000442151 PLA2G2CQ5R387 149 aa8.19□□□□□ -1.1
CD44-211ENST00000442151 LY6G5CQ5SRR4 150 aa8.19□□□□□ -1.1
CD44-211ENST00000442151 ZNF658Q5TYW1 1059 aaPredicted RBP8.19□□□□□ -1.1
CD44-211ENST00000442151 RNF43Q68DV7 783 aa8.19□□□□□ -1.1
CD44-211ENST00000442151 PAQR9Q6ZVX9 377 aa8.19□□□□□ -1.1
CD44-211ENST00000442151 RASSF3Q86WH2 238 aa8.19□□□□□ -1.1
CD44-211ENST00000442151 ELOA2Q8IYF1 753 aaPredicted RBP8.19□□□□□ -1.1
CD44-211ENST00000442151 CEP76Q8TAP6 659 aa8.19□□□□□ -1.1
CD44-211ENST00000442151 SMARCE1Q969G3 411 aa8.19□□□□□ -1.1
CD44-211ENST00000442151 TMEM176AQ96HP8 235 aa8.19□□□□□ -1.1
CD44-211ENST00000442151 FAM84AQ96KN4 292 aa8.19□□□□□ -1.1
CD44-211ENST00000442151 TIGD1Q96MW7 591 aa8.19□□□□□ -1.1
CD44-211ENST00000442151 KLF16Q9BXK1 252 aaPredicted RBP8.19□□□□□ -1.1
CD44-211ENST00000442151 NUSAP1Q9BXS6 441 aaKnown RBP8.19□□□□□ -1.1
CD44-211ENST00000442151 RAB20Q9NX57 234 aa8.19□□□□□ -1.1
CD44-211ENST00000442151 STARD13Q9Y3M8 1113 aa8.19□□□□□ -1.1
CD44-211ENST00000442151 PSMA7O14818 248 aa8.18□□□□□ -1.1
CD44-211ENST00000442151 AP5Z1O43299 807 aa8.18□□□□□ -1.1
CD44-211ENST00000442151 CILPO75339 1184 aa8.18□□□□□ -1.1
CD44-211ENST00000442151 RARGP13631 454 aa8.18□□□□□ -1.1
CD44-211ENST00000442151 CCDC130P13994 396 aa8.18□□□□□ -1.1
CD44-211ENST00000442151 ACO1P21399 889 aaKnown RBP8.18□□□□□ -1.1
CD44-211ENST00000442151 ADORA2BP29275 332 aa8.18□□□□□ -1.1
CD44-211ENST00000442151 NTSR1P30989 418 aa8.18□□□□□ -1.1
CD44-211ENST00000442151 PXNP49023 591 aaPredicted RBP8.18□□□□□ -1.1
CD44-211ENST00000442151 MXI1P50539 228 aa8.18□□□□□ -1.1
CD44-211ENST00000442151 DLG4P78352 724 aa8.18□□□□□ -1.1
CD44-211ENST00000442151 LRRC63Q05C16 580 aa8.18□□□□□ -1.1
CD44-211ENST00000442151 STILQ15468 1287 aa8.18□□□□□ -1.1
CD44-211ENST00000442151 PPM1JQ5JR12 505 aa8.18□□□□□ -1.1
CD44-211ENST00000442151 C10orf120Q5SQS8 335 aa8.18□□□□□ -1.1
CD44-211ENST00000442151 STPG1Q5TH74 334 aa8.18□□□□□ -1.1
CD44-211ENST00000442151 SCARA3Q6AZY7 606 aa8.18□□□□□ -1.1
CD44-211ENST00000442151 CCDC186Q7Z3E2 898 aa8.18□□□□□ -1.1
CD44-211ENST00000442151 CYP2U1Q7Z449 544 aa8.18□□□□□ -1.1
CD44-211ENST00000442151 TTC30AQ86WT1 665 aa8.18□□□□□ -1.1
CD44-211ENST00000442151 ZNF557Q8N988 423 aaPredicted RBP8.18□□□□□ -1.1
CD44-211ENST00000442151 TXNDC5Q8NBS9 432 aaKnown RBP8.18□□□□□ -1.1
CD44-211ENST00000442151 SCAMP5Q8TAC9 235 aa8.18□□□□□ -1.1
CD44-211ENST00000442151 CHAMP1Q96JM3 812 aa8.18□□□□□ -1.1
CD44-211ENST00000442151 SMOQ99835 787 aa8.18□□□□□ -1.1
CD44-211ENST00000442151 BBS2Q9BXC9 721 aa8.18□□□□□ -1.1
CD44-211ENST00000442151 SLC2A11Q9BYW1 496 aa8.18□□□□□ -1.1
CD44-211ENST00000442151 GZF1Q9H116 711 aaPredicted RBP8.18□□□□□ -1.1
CD44-211ENST00000442151 SDCBP2Q9H190 292 aa8.18□□□□□ -1.1
CD44-211ENST00000442151 DUSP15Q9H1R2 295 aaPredicted RBP8.18□□□□□ -1.1
CD44-211ENST00000442151 MARK1Q9P0L2 795 aa8.18□□□□□ -1.1
CD44-211ENST00000442151 EVLQ9UI08 416 aaPredicted RBP8.18□□□□□ -1.1
CD44-211ENST00000442151 NAGPAQ9UK23 515 aa8.18□□□□□ -1.1
CD44-211ENST00000442151 KIF26AQ9ULI4 1882 aaPredicted RBP8.18□□□□□ -1.1
CD44-211ENST00000442151 GNA14O95837 355 aa8.17□□□□□ -1.1
CD44-211ENST00000442151 ADRB1P08588 477 aa8.17□□□□□ -1.1
CD44-211ENST00000442151 ASPAP45381 313 aa8.17□□□□□ -1.1
CD44-211ENST00000442151 SLC6A11P48066 632 aa8.17□□□□□ -1.1
CD44-211ENST00000442151 DHPSP49366 369 aaPredicted RBP8.17□□□□□ -1.1
CD44-211ENST00000442151 KIF11P52732 1056 aa8.17□□□□□ -1.1
CD44-211ENST00000442151 CACNA2D1P54289 1103 aa8.17□□□□□ -1.1
CD44-211ENST00000442151 ARID5AQ03989 594 aa8.17□□□□□ -1.1
CD44-211ENST00000442151 SFSWAPQ12872 951 aaKnown RBP8.17□□□□□ -1.1
CD44-211ENST00000442151 CCDC142Q17RM4 750 aa8.17□□□□□ -1.1
CD44-211ENST00000442151 C10orf76Q5T2E6 689 aa8.17□□□□□ -1.1
CD44-211ENST00000442151 TCERG1LQ5VWI1 586 aa8.17□□□□□ -1.1
CD44-211ENST00000442151 ARHGAP17Q68EM7 881 aa8.17□□□□□ -1.1
CD44-211ENST00000442151 SMYD5Q6GMV2 418 aa8.17□□□□□ -1.1
CD44-211ENST00000442151 ANO7Q6IWH7 933 aa8.17□□□□□ -1.1
CD44-211ENST00000442151 PKN3Q6P5Z2 889 aa8.17□□□□□ -1.1
CD44-211ENST00000442151 RSRC2Q7L4I2 434 aaKnown RBP8.17□□□□□ -1.1
CD44-211ENST00000442151 CCDC33Q8N5R6 958 aa8.17□□□□□ -1.1
CD44-211ENST00000442151 ZNF513Q8N8E2 541 aaPredicted RBP8.17□□□□□ -1.1
CD44-211ENST00000442151 TERB1Q8NA31 727 aa8.17□□□□□ -1.1
CD44-211ENST00000442151 ANKRD52Q8NB46 1076 aa8.17□□□□□ -1.1
CD44-211ENST00000442151 RIN3Q8TB24 985 aa8.17□□□□□ -1.1
CD44-211ENST00000442151 PLEKHO2Q8TD55 490 aa8.17□□□□□ -1.1
CD44-211ENST00000442151 GOLGA1Q92805 767 aa8.17□□□□□ -1.1
CD44-211ENST00000442151 DHTKD1Q96HY7 919 aaPredicted RBP8.17□□□□□ -1.1
CD44-211ENST00000442151 FAM81BQ96LP2 452 aa8.17□□□□□ -1.1
CD44-211ENST00000442151 SLC32A1Q9H598 525 aa8.17□□□□□ -1.1
CD44-211ENST00000442151 CCSER2Q9H7U1 834 aa8.17□□□□□ -1.1
CD44-211ENST00000442151 MMRN2Q9H8L6 949 aa8.17□□□□□ -1.1
CD44-211ENST00000442151 LRRC4Q9HBW1 653 aa8.17□□□□□ -1.1
CD44-211ENST00000442151 FAM49BQ9NUQ9 324 aa8.17□□□□□ -1.1
CD44-211ENST00000442151 DNAJC17Q9NVM6 304 aaKnown RBP8.17□□□□□ -1.1
CD44-211ENST00000442151 ARMCX3Q9UH62 379 aaPredicted RBP8.17□□□□□ -1.1
CD44-211ENST00000442151 COL4A3Q01955 1670 aa8.17□□□□□ -1.1
CD44-211ENST00000442151 GREB1Q4ZG55 1949 aa8.17□□□□□ -1.1
CD44-211ENST00000442151 ANAPC1Q9H1A4 1944 aa8.17□□□□□ -1.1
CD44-211ENST00000442151 DCHS1Q96JQ0 3298 aa8.17□□□□□ -1.1
CD44-211ENST00000442151 MED19A0JLT2 244 aaPredicted RBP8.17□□□□□ -1.1
CD44-211ENST00000442151 BICDL2A1A5D9 508 aa8.17□□□□□ -1.1
CD44-211ENST00000442151 P4HA2O15460 535 aa8.17□□□□□ -1.1
CD44-211ENST00000442151 TULP3O75386 442 aa8.17□□□□□ -1.1
CD44-211ENST00000442151 IRF1P10914 325 aa8.17□□□□□ -1.1
CD44-211ENST00000442151 VDRP11473 427 aa8.17□□□□□ -1.1
CD44-211ENST00000442151 CD58P19256 250 aa8.17□□□□□ -1.1
CD44-211ENST00000442151 DGKGP49619 791 aa8.17□□□□□ -1.1
CD44-211ENST00000442151 ATXN3P54252 364 aaPredicted RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms