RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 MMP13P45452 471 aa9.53□□□□□ -0.88
HDAC6-209ENST00000440653 RPL34P49207 117 aaKnown RBP9.53□□□□□ -0.88
HDAC6-209ENST00000440653 ATP1A2P50993 1020 aa9.53□□□□□ -0.88
HDAC6-209ENST00000440653 ARSEP51690 589 aa9.53□□□□□ -0.88
HDAC6-209ENST00000440653 GJA9P57773 515 aa9.53□□□□□ -0.88
HDAC6-209ENST00000440653 MAGOHP61326 146 aaKnown RBP9.53□□□□□ -0.88
HDAC6-209ENST00000440653 SLC6A3Q01959 620 aa9.53□□□□□ -0.88
HDAC6-209ENST00000440653 RASA2Q15283 850 aa9.53□□□□□ -0.88
HDAC6-209ENST00000440653 P3H1Q32P28 736 aa9.53□□□□□ -0.88
HDAC6-209ENST00000440653 BOLA3Q53S33 107 aa9.53□□□□□ -0.88
HDAC6-209ENST00000440653 DNAJC21Q5F1R6 531 aaKnown RBP9.53□□□□□ -0.88
HDAC6-209ENST00000440653 TNFAIP8L3Q5GJ75 292 aa9.53□□□□□ -0.88
HDAC6-209ENST00000440653 GNASQ5JWF2 1037 aa9.53□□□□□ -0.88
HDAC6-209ENST00000440653 DAB2IPQ5VWQ8 1189 aa9.53□□□□□ -0.88
HDAC6-209ENST00000440653 KAZNQ674X7 775 aa9.53□□□□□ -0.88
HDAC6-209ENST00000440653 OR6B2Q6IFH4 312 aa9.53□□□□□ -0.88
HDAC6-209ENST00000440653 CENPUQ71F23 418 aa9.53□□□□□ -0.88
HDAC6-209ENST00000440653 LIMS2Q7Z4I7 341 aa9.53□□□□□ -0.88
HDAC6-209ENST00000440653 TMEM110Q86TL2 294 aa9.53□□□□□ -0.88
HDAC6-209ENST00000440653 PSTKQ8IV42 348 aaKnown RBP9.53□□□□□ -0.88
HDAC6-209ENST00000440653 ADGRF2Q8IZF7 708 aa9.53□□□□□ -0.88
HDAC6-209ENST00000440653 CRYBG2Q8N1P7 616 aa9.53□□□□□ -0.88
HDAC6-209ENST00000440653 TMEM86AQ8N2M4 240 aa9.53□□□□□ -0.88
HDAC6-209ENST00000440653 SLC43A3Q8NBI5 491 aa9.53□□□□□ -0.88
HDAC6-209ENST00000440653 APPL2Q8NEU8 664 aa9.53□□□□□ -0.88
HDAC6-209ENST00000440653 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.53□□□□□ -0.88
HDAC6-209ENST00000440653 DNAJB3Q8WWF6 145 aa9.53□□□□□ -0.88
HDAC6-209ENST00000440653 ASIC4Q96FT7 647 aa9.53□□□□□ -0.88
HDAC6-209ENST00000440653 HSFY1Q96LI6 401 aa9.53□□□□□ -0.88
HDAC6-209ENST00000440653 ZMYND15Q9H091 742 aa9.53□□□□□ -0.88
HDAC6-209ENST00000440653 NSRP1Q9H0G5 558 aaKnown RBP9.53□□□□□ -0.88
HDAC6-209ENST00000440653 SNX25Q9H3E2 840 aa9.53□□□□□ -0.88
HDAC6-209ENST00000440653 SEMA4AQ9H3S1 761 aa9.53□□□□□ -0.88
HDAC6-209ENST00000440653 AAASQ9NRG9 546 aa9.53□□□□□ -0.88
HDAC6-209ENST00000440653 SENP1Q9P0U3 644 aa9.53□□□□□ -0.88
HDAC6-209ENST00000440653 DNPEPQ9ULA0 475 aa9.53□□□□□ -0.88
HDAC6-209ENST00000440653 TPX2Q9ULW0 747 aaKnown RBP9.53□□□□□ -0.88
HDAC6-209ENST00000440653 NOVA2Q9UNW9 492 aaKnown RBP9.53□□□□□ -0.88
HDAC6-209ENST00000440653 FAM50BQ9Y247 325 aa9.53□□□□□ -0.88
HDAC6-209ENST00000440653 GINS2Q9Y248 185 aa9.53□□□□□ -0.88
HDAC6-209ENST00000440653 ANKRD11Q6UB99 2663 aaPredicted RBP9.53□□□□□ -0.88
HDAC6-209ENST00000440653 EP300Q09472 2414 aaPredicted RBP9.53□□□□□ -0.88
HDAC6-209ENST00000440653 SF3B1O75533 1304 aaKnown RBP eCLIP9.53□□□□□ -0.881e-6■■■■■ 66.8
HDAC6-209ENST00000440653 FRYLO94915 3013 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 SMIM28A0A1B0GU29 152 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 ARHGEF37A1IGU5 675 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 A8MXQ7 604 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 KPNA7A9QM74 516 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 SGK1O00141 431 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 XPO1O14980 1071 aaKnown RBP9.52□□□□□ -0.89
HDAC6-209ENST00000440653 TP73O15350 636 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 GALR2O43603 387 aaPredicted RBP9.52□□□□□ -0.89
HDAC6-209ENST00000440653 CST8O60676 142 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 CAND2O75155 1236 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 DAB1O75553 588 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 ENDOD1O94919 500 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 KRT10P13645 584 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 TCF4P15884 667 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 PDGFRAP16234 1089 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 PHBP35232 272 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 LTBRP36941 435 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 HNRNPH2P55795 449 aaKnown RBP9.52□□□□□ -0.89
HDAC6-209ENST00000440653 ERVK-21P61565 698 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 BEX3Q00994 111 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 OTUD4Q01804 1114 aaKnown RBP9.52□□□□□ -0.89
HDAC6-209ENST00000440653 ROR1Q01973 937 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 TMEM62Q0P6H9 643 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 KRT81Q14533 505 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 NOMO1Q15155 1222 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 SMAD2Q15796 467 aaKnown RBP9.52□□□□□ -0.89
HDAC6-209ENST00000440653 UBXN11Q5T124 520 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 RNASEH2BQ5TBB1 312 aaKnown RBP9.52□□□□□ -0.89
HDAC6-209ENST00000440653 SCARA3Q6AZY7 606 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 TWF2Q6IBS0 349 aaKnown RBP9.52□□□□□ -0.89
HDAC6-209ENST00000440653 TTC30AQ86WT1 665 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 TDRPQ86YL5 185 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 RFX6Q8HWS3 928 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 CDKL3Q8IVW4 592 aaPredicted RBP9.52□□□□□ -0.89
HDAC6-209ENST00000440653 PPIL6Q8IXY8 311 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 ANKRD52Q8NB46 1076 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 ATP11CQ8NB49 1132 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 PCSK9Q8NBP7 692 aaKnown RBP9.52□□□□□ -0.89
HDAC6-209ENST00000440653 KCTD6Q8NC69 237 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 OR6B3Q8NGW1 331 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 ACTL9Q8TC94 416 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 RSAD2Q8WXG1 361 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 RAPGEF5Q92565 580 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 P3H4Q92791 437 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 PABPC5Q96DU9 382 aaKnown RBP9.52□□□□□ -0.89
HDAC6-209ENST00000440653 ZMAT2Q96NC0 199 aaKnown RBP9.52□□□□□ -0.89
HDAC6-209ENST00000440653 MRPL45Q9BRJ2 306 aaKnown RBP9.52□□□□□ -0.89
HDAC6-209ENST00000440653 CCDC134Q9H6E4 229 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 ZWILCHQ9H900 591 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 UBN1Q9NPG3 1134 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.52□□□□□ -0.89
HDAC6-209ENST00000440653 NINJ2Q9NZG7 142 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 BCCIPQ9P287 314 aaKnown RBP eCLIP9.52□□□□□ -0.89
HDAC6-209ENST00000440653 RCOR3Q9P2K3 495 aaPredicted RBP9.52□□□□□ -0.89
HDAC6-209ENST00000440653 GTF2IRD1Q9UHL9 959 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 IPPQ9Y573 584 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms