RNA–Protein interactions for RNA: ENST00000440088.5

APTR-204, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best) BASIC

Gene APTR, Length 2,029 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-204ENST00000440088 EDEM1Q92611 657 aa20.48■□□□□ 0.87
APTR-204ENST00000440088 PGAP3Q96FM1 320 aaPredicted RBP20.48■□□□□ 0.87
APTR-204ENST00000440088 FAM118BQ9BPY3 351 aa20.48■□□□□ 0.87
APTR-204ENST00000440088 PCDH18Q9HCL0 1135 aa20.48■□□□□ 0.87
APTR-204ENST00000440088 FAM114A2Q9NRY5 505 aa20.48■□□□□ 0.87
APTR-204ENST00000440088 MRPL42Q9Y6G3 142 aaKnown RBP20.48■□□□□ 0.87
APTR-204ENST00000440088 SYNJ2BP-COX16A0A087WUM0 186 aa20.48■□□□□ 0.87
APTR-204ENST00000440088 DAPK3O43293 454 aa20.48■□□□□ 0.87
APTR-204ENST00000440088 GAS8O95995 478 aa20.48■□□□□ 0.87
APTR-204ENST00000440088 FGBP02675 491 aa20.48■□□□□ 0.87
APTR-204ENST00000440088 SOD2P04179 222 aa20.48■□□□□ 0.87
APTR-204ENST00000440088 FPGSQ05932 587 aa20.48■□□□□ 0.87
APTR-204ENST00000440088 MMRN1Q13201 1228 aa20.48■□□□□ 0.87
APTR-204ENST00000440088 TFDP2Q14188 446 aa20.48■□□□□ 0.87
APTR-204ENST00000440088 HLTFQ14527 1009 aaKnown RBP eCLIP20.48■□□□□ 0.87
APTR-204ENST00000440088 PPP1R7Q15435 360 aa20.48■□□□□ 0.87
APTR-204ENST00000440088 CA9Q16790 459 aa20.48■□□□□ 0.87
APTR-204ENST00000440088 EMBQ6PCB8 327 aa20.48■□□□□ 0.87
APTR-204ENST00000440088 RNF19BQ6ZMZ0 732 aa20.48■□□□□ 0.87
APTR-204ENST00000440088 SYDE1Q6ZW31 735 aaPredicted RBP20.48■□□□□ 0.87
APTR-204ENST00000440088 PSTKQ8IV42 348 aaKnown RBP20.48■□□□□ 0.87
APTR-204ENST00000440088 FAM71BQ8TC56 605 aa20.48■□□□□ 0.87
APTR-204ENST00000440088 BADQ92934 168 aa20.48■□□□□ 0.87
APTR-204ENST00000440088 CCDC114Q96M63 670 aa20.48■□□□□ 0.87
APTR-204ENST00000440088 ZNF670Q9BS34 389 aa20.48■□□□□ 0.87
APTR-204ENST00000440088 FRMD8P1Q9BZ68 369 aaPredicted RBP20.48■□□□□ 0.87
APTR-204ENST00000440088 TRIM31Q9BZY9 425 aa20.48■□□□□ 0.87
APTR-204ENST00000440088 FBXO44Q9H4M3 255 aa20.48■□□□□ 0.87
APTR-204ENST00000440088 DHX35Q9H5Z1 703 aaKnown RBP20.48■□□□□ 0.87
APTR-204ENST00000440088 COX16Q9P0S2 106 aa20.48■□□□□ 0.87
APTR-204ENST00000440088 BACE2Q9Y5Z0 518 aa20.48■□□□□ 0.87
APTR-204ENST00000440088 ZNF487B1APH4 448 aa20.47■□□□□ 0.87
APTR-204ENST00000440088 ATP8B1O43520 1251 aa20.47■□□□□ 0.87
APTR-204ENST00000440088 LIASO43766 372 aa20.47■□□□□ 0.87
APTR-204ENST00000440088 DRG2P55039 364 aaKnown RBP20.47■□□□□ 0.87
APTR-204ENST00000440088 LMNB2Q03252 620 aa20.47■□□□□ 0.87
APTR-204ENST00000440088 BYSLQ13895 437 aaKnown RBP20.47■□□□□ 0.87
APTR-204ENST00000440088 KCTD19Q17RG1 926 aaPredicted RBP20.47■□□□□ 0.87
APTR-204ENST00000440088 PPP6R3Q5H9R7 873 aaPredicted RBP20.47■□□□□ 0.87
APTR-204ENST00000440088 ZNF365Q70YC5 407 aa20.47■□□□□ 0.87
APTR-204ENST00000440088 TTC9BQ8N6N2 239 aa20.47■□□□□ 0.87
APTR-204ENST00000440088 COLGALT1Q8NBJ5 622 aa20.47■□□□□ 0.87
APTR-204ENST00000440088 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.47■□□□□ 0.87
APTR-204ENST00000440088 HAUS1Q96CS2 278 aa20.47■□□□□ 0.87
APTR-204ENST00000440088 RNF157Q96PX1 679 aa20.47■□□□□ 0.87
APTR-204ENST00000440088 SLC9A7Q96T83 725 aa20.47■□□□□ 0.87
APTR-204ENST00000440088 DPH5Q9H2P9 285 aa20.47■□□□□ 0.87
APTR-204ENST00000440088 ABCC13Q9NSE7 274 aa20.47■□□□□ 0.87
APTR-204ENST00000440088 PIGVQ9NUD9 493 aa20.47■□□□□ 0.87
APTR-204ENST00000440088 SPG21Q9NZD8 308 aa20.47■□□□□ 0.87
APTR-204ENST00000440088 FZD10Q9ULW2 581 aa20.47■□□□□ 0.87
APTR-204ENST00000440088 ALPK3Q96L96 1907 aa20.46■□□□□ 0.87
APTR-204ENST00000440088 APOC4-APOC2K7ER74 178 aa20.46■□□□□ 0.87
APTR-204ENST00000440088 F9P00740 461 aa20.46■□□□□ 0.87
APTR-204ENST00000440088 APOC2P02655 101 aa20.46■□□□□ 0.87
APTR-204ENST00000440088 L1CAMP32004 1257 aa20.46■□□□□ 0.87
APTR-204ENST00000440088 GPR15P49685 360 aa20.46■□□□□ 0.87
APTR-204ENST00000440088 YWHAGP61981 247 aaKnown RBP eCLIP20.46■□□□□ 0.87
APTR-204ENST00000440088 KRT17Q04695 432 aa20.46■□□□□ 0.87
APTR-204ENST00000440088 MGAT5BQ3V5L5 792 aa20.46■□□□□ 0.87
APTR-204ENST00000440088 SDHAF4Q5VUM1 108 aa20.46■□□□□ 0.87
APTR-204ENST00000440088 DDX42Q86XP3 938 aaKnown RBP eCLIP20.46■□□□□ 0.87
APTR-204ENST00000440088 DDIT4Q9NX09 232 aa20.46■□□□□ 0.87
APTR-204ENST00000440088 DNPEPQ9ULA0 475 aa20.46■□□□□ 0.87
APTR-204ENST00000440088 COL4A4P53420 1690 aaPredicted RBP20.46■□□□□ 0.87
APTR-204ENST00000440088 IL4RP24394 825 aa20.46■□□□□ 0.87
APTR-204ENST00000440088 AIF1P55008 147 aa20.46■□□□□ 0.87
APTR-204ENST00000440088 ANKRD20A8PQ5CZ79 823 aa20.46■□□□□ 0.87
APTR-204ENST00000440088 HDXQ7Z353 690 aa20.46■□□□□ 0.87
APTR-204ENST00000440088 ADAM32Q8TC27 787 aa20.46■□□□□ 0.87
APTR-204ENST00000440088 SEPT5Q99719 369 aaPredicted RBP20.46■□□□□ 0.87
APTR-204ENST00000440088 FUT8Q9BYC5 575 aa20.46■□□□□ 0.87
APTR-204ENST00000440088 FAM204AQ9H8W3 233 aa20.46■□□□□ 0.87
APTR-204ENST00000440088 SCML2Q9UQR0 700 aa20.46■□□□□ 0.87
APTR-204ENST00000440088 SLC27A5Q9Y2P5 690 aa20.46■□□□□ 0.87
APTR-204ENST00000440088 PTPRSQ13332 1948 aa20.45■□□□□ 0.86
APTR-204ENST00000440088 C2CD2LO14523 706 aa20.45■□□□□ 0.86
APTR-204ENST00000440088 OR1D2P34982 312 aa20.45■□□□□ 0.86
APTR-204ENST00000440088 OTUD4Q01804 1114 aaKnown RBP20.45■□□□□ 0.86
APTR-204ENST00000440088 ROR1Q01973 937 aa20.45■□□□□ 0.86
APTR-204ENST00000440088 BTBD8Q5XKL5 378 aa20.45■□□□□ 0.86
APTR-204ENST00000440088 DENND5BQ6ZUT9 1274 aa20.45■□□□□ 0.86
APTR-204ENST00000440088 ACTL9Q8TC94 416 aa20.45■□□□□ 0.86
APTR-204ENST00000440088 NKD2Q969F2 451 aaPredicted RBP20.45■□□□□ 0.86
APTR-204ENST00000440088 FAF2Q96CS3 445 aa20.45■□□□□ 0.86
APTR-204ENST00000440088 WDR6Q9NNW5 1121 aaKnown RBP20.45■□□□□ 0.86
APTR-204ENST00000440088 MTMR10Q9NXD2 777 aa20.45■□□□□ 0.86
APTR-204ENST00000440088 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.45■□□□□ 0.86
APTR-204ENST00000440088 ZNF148Q9UQR1 794 aa20.45■□□□□ 0.86
APTR-204ENST00000440088 DRG1Q9Y295 367 aaKnown RBP20.45■□□□□ 0.86
APTR-204ENST00000440088 WDR27A2RRH5 827 aa20.44■□□□□ 0.86
APTR-204ENST00000440088 GJB5O95377 273 aa20.44■□□□□ 0.86
APTR-204ENST00000440088 VNN2O95498 520 aa20.44■□□□□ 0.86
APTR-204ENST00000440088 HAPLN1P10915 354 aaPredicted RBP20.44■□□□□ 0.86
APTR-204ENST00000440088 GBP1P32455 592 aa20.44■□□□□ 0.86
APTR-204ENST00000440088 PPM1AP35813 382 aa20.44■□□□□ 0.86
APTR-204ENST00000440088 TNNT3P45378 269 aaPredicted RBP20.44■□□□□ 0.86
APTR-204ENST00000440088 GLUD2P49448 558 aa20.44■□□□□ 0.86
APTR-204ENST00000440088 VCPP55072 806 aaKnown RBP20.44■□□□□ 0.86
APTR-204ENST00000440088 DSG1Q02413 1049 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms