RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 F11P03951 625 aa21.6■■□□□ 1.05
CHD3-204ENST00000439235 TNNT1P13805 278 aa21.6■■□□□ 1.05
CHD3-204ENST00000439235 GABRR2P28476 465 aa21.6■■□□□ 1.05
CHD3-204ENST00000439235 CASQ1P31415 396 aa21.6■■□□□ 1.05
CHD3-204ENST00000439235 GBP1P32455 592 aa21.6■■□□□ 1.05
CHD3-204ENST00000439235 RDXP35241 583 aaKnown RBP21.6■■□□□ 1.05
CHD3-204ENST00000439235 GTF2F1P35269 517 aaKnown RBP eCLIP21.6■■□□□ 1.05
CHD3-204ENST00000439235 PCK1P35558 622 aa21.6■■□□□ 1.05
CHD3-204ENST00000439235 SSR1P43307 286 aaKnown RBP21.6■■□□□ 1.05
CHD3-204ENST00000439235 PGFP49763 221 aa21.6■■□□□ 1.05
CHD3-204ENST00000439235 DEUP1Q05D60 604 aa21.6■■□□□ 1.05
CHD3-204ENST00000439235 HADHQ16836 314 aaKnown RBP21.6■■□□□ 1.05
CHD3-204ENST00000439235 MEI1Q5TIA1 1274 aa21.6■■□□□ 1.05
CHD3-204ENST00000439235 CC2D1AQ6P1N0 951 aaPredicted RBP21.6■■□□□ 1.05
CHD3-204ENST00000439235 SYT10Q6XYQ8 523 aa21.6■■□□□ 1.05
CHD3-204ENST00000439235 CENPIQ92674 756 aaPredicted RBP21.6■■□□□ 1.05
CHD3-204ENST00000439235 PGAP3Q96FM1 320 aaPredicted RBP21.6■■□□□ 1.05
CHD3-204ENST00000439235 LRCH3Q96II8 777 aa21.6■■□□□ 1.05
CHD3-204ENST00000439235 LRRC3Q9BY71 257 aa21.6■■□□□ 1.05
CHD3-204ENST00000439235 PIDD1Q9HB75 910 aa21.6■■□□□ 1.05
CHD3-204ENST00000439235 IL21Q9HBE4 155 aa21.6■■□□□ 1.05
CHD3-204ENST00000439235 MTCH2Q9Y6C9 303 aa21.6■■□□□ 1.05
CHD3-204ENST00000439235 GREB1Q4ZG55 1949 aa21.6■■□□□ 1.05
CHD3-204ENST00000439235 CTAGE9A4FU28 777 aa21.59■■□□□ 1.05
CHD3-204ENST00000439235 TLR5O60602 858 aa21.59■■□□□ 1.05
CHD3-204ENST00000439235 LRCH4O75427 683 aa21.59■■□□□ 1.05
CHD3-204ENST00000439235 MYL4P12829 197 aa21.59■■□□□ 1.05
CHD3-204ENST00000439235 EPHA5P54756 1037 aa21.59■■□□□ 1.05
CHD3-204ENST00000439235 HECTD3Q5T447 861 aa21.59■■□□□ 1.05
CHD3-204ENST00000439235 PDZD4Q76G19 769 aaPredicted RBP21.59■■□□□ 1.05
CHD3-204ENST00000439235 SND1Q7KZF4 910 aaKnown RBP eCLIP21.59■■□□□ 1.05
CHD3-204ENST00000439235 TAC4Q86UU9 113 aa21.59■■□□□ 1.05
CHD3-204ENST00000439235 HS6ST3Q8IZP7 471 aa21.59■■□□□ 1.05
CHD3-204ENST00000439235 SMG7Q92540 1137 aaKnown RBP21.59■■□□□ 1.05
CHD3-204ENST00000439235 MRPS31Q92665 395 aaKnown RBP21.59■■□□□ 1.05
CHD3-204ENST00000439235 ZNF707Q96C28 371 aaPredicted RBP21.59■■□□□ 1.05
CHD3-204ENST00000439235 SERPINB11Q96P15 392 aa21.59■■□□□ 1.05
CHD3-204ENST00000439235 NAPGQ99747 312 aaPredicted RBP21.59■■□□□ 1.05
CHD3-204ENST00000439235 DDIT4Q9NX09 232 aa21.59■■□□□ 1.05
CHD3-204ENST00000439235 HYOU1Q9Y4L1 999 aa21.59■■□□□ 1.05
CHD3-204ENST00000439235 MTCL1Q9Y4B5 1905 aaKnown RBP21.59■■□□□ 1.05
CHD3-204ENST00000439235 RANBP2P49792 3224 aaKnown RBP21.58■■□□□ 1.05
CHD3-204ENST00000439235 CCDC66A2RUB6 948 aa21.58■■□□□ 1.05
CHD3-204ENST00000439235 PSTPIP1O43586 416 aa21.58■■□□□ 1.05
CHD3-204ENST00000439235 NCK2O43639 380 aa21.58■■□□□ 1.05
CHD3-204ENST00000439235 ENDOD1O94919 500 aa21.58■■□□□ 1.05
CHD3-204ENST00000439235 GLP2RO95838 553 aa21.58■■□□□ 1.05
CHD3-204ENST00000439235 TRUB2O95900 331 aaKnown RBP21.58■■□□□ 1.05
CHD3-204ENST00000439235 RBM10P98175 930 aaKnown RBP21.58■■□□□ 1.05
CHD3-204ENST00000439235 RPS6KA1Q15418 735 aa21.58■■□□□ 1.05
CHD3-204ENST00000439235 C10orf120Q5SQS8 335 aa21.58■■□□□ 1.05
CHD3-204ENST00000439235 LRRC38Q5VT99 294 aa21.58■■□□□ 1.05
CHD3-204ENST00000439235 OTUD1Q5VV17 481 aaPredicted RBP21.58■■□□□ 1.05
CHD3-204ENST00000439235 KLHDC10Q6PID8 442 aa21.58■■□□□ 1.05
CHD3-204ENST00000439235 BNIPLQ7Z465 357 aa21.58■■□□□ 1.05
CHD3-204ENST00000439235 RHOT1Q8IXI2 618 aa21.58■■□□□ 1.05
CHD3-204ENST00000439235 UBL4BQ8N7F7 174 aa21.58■■□□□ 1.05
CHD3-204ENST00000439235 NACA2Q9H009 215 aa21.58■■□□□ 1.05
CHD3-204ENST00000439235 DNMT3BQ9UBC3 853 aaKnown RBP21.58■■□□□ 1.05
CHD3-204ENST00000439235 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.58■■□□□ 1.05
CHD3-204ENST00000439235 ZNF197O14709 1029 aa21.57■■□□□ 1.04
CHD3-204ENST00000439235 IRAK2O43187 625 aa21.57■■□□□ 1.04
CHD3-204ENST00000439235 PRPSAP2O60256 369 aa21.57■■□□□ 1.04
CHD3-204ENST00000439235 IGLV3-25P01717 112 aa21.57■■□□□ 1.04
CHD3-204ENST00000439235 RHOP08100 348 aa21.57■■□□□ 1.04
CHD3-204ENST00000439235 PFKLP17858 780 aa21.57■■□□□ 1.04
CHD3-204ENST00000439235 TFE3P19532 575 aaPredicted RBP21.57■■□□□ 1.04
CHD3-204ENST00000439235 IGFBP4P22692 258 aa21.57■■□□□ 1.04
CHD3-204ENST00000439235 CTNNA2P26232 953 aa21.57■■□□□ 1.04
CHD3-204ENST00000439235 CTNNA1P35221 906 aaKnown RBP21.57■■□□□ 1.04
CHD3-204ENST00000439235 ATP5C1P36542 298 aaKnown RBP21.57■■□□□ 1.04
CHD3-204ENST00000439235 HDAC4P56524 1084 aa21.57■■□□□ 1.04
CHD3-204ENST00000439235 PITX1P78337 314 aaPredicted RBP21.57■■□□□ 1.04
CHD3-204ENST00000439235 NME3Q13232 169 aa21.57■■□□□ 1.04
CHD3-204ENST00000439235 NNTQ13423 1086 aa21.57■■□□□ 1.04
CHD3-204ENST00000439235 ADAM15Q13444 863 aa21.57■■□□□ 1.04
CHD3-204ENST00000439235 ADGRE1Q14246 886 aa21.57■■□□□ 1.04
CHD3-204ENST00000439235 SH3PXD2AQ5TCZ1 1133 aa21.57■■□□□ 1.04
CHD3-204ENST00000439235 GPR153Q6NV75 609 aa21.57■■□□□ 1.04
CHD3-204ENST00000439235 ANKRD54Q6NXT1 300 aa21.57■■□□□ 1.04
CHD3-204ENST00000439235 GAREM2Q75VX8 874 aa21.57■■□□□ 1.04
CHD3-204ENST00000439235 TMEM150AQ86TG1 271 aa21.57■■□□□ 1.04
CHD3-204ENST00000439235 CPNE8Q86YQ8 564 aa21.57■■□□□ 1.04
CHD3-204ENST00000439235 CD101Q93033 1021 aa21.57■■□□□ 1.04
CHD3-204ENST00000439235 HES6Q96HZ4 224 aa21.57■■□□□ 1.04
CHD3-204ENST00000439235 ATXN3LQ9H3M9 355 aa21.57■■□□□ 1.04
CHD3-204ENST00000439235 CCSER2Q9H7U1 834 aa21.57■■□□□ 1.04
CHD3-204ENST00000439235 HCFC1R1Q9NWW0 138 aa21.57■■□□□ 1.04
CHD3-204ENST00000439235 RASAL2Q9UJF2 1139 aa21.57■■□□□ 1.04
CHD3-204ENST00000439235 USP18Q9UMW8 372 aa21.57■■□□□ 1.04
CHD3-204ENST00000439235 SYNJ2BP-COX16A0A087WUM0 186 aa21.56■■□□□ 1.04
CHD3-204ENST00000439235 LINC01565O15544 149 aa21.56■■□□□ 1.04
CHD3-204ENST00000439235 OAS1P00973 400 aaKnown RBP21.56■■□□□ 1.04
CHD3-204ENST00000439235 KRT7P08729 469 aa21.56■■□□□ 1.04
CHD3-204ENST00000439235 HOXB8P17481 243 aaPredicted RBP21.56■■□□□ 1.04
CHD3-204ENST00000439235 DDX6P26196 483 aaKnown RBP eCLIP21.56■■□□□ 1.04
CHD3-204ENST00000439235 MIPP30301 263 aa21.56■■□□□ 1.04
CHD3-204ENST00000439235 EFEMP1Q12805 493 aa21.56■■□□□ 1.04
CHD3-204ENST00000439235 ARHGAP15Q53QZ3 475 aa21.56■■□□□ 1.04
CHD3-204ENST00000439235 DAB2IPQ5VWQ8 1189 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms