RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 SPOCD1Q6ZMY3 1216 aa16.32■□□□□ 0.2
PTPN13-204ENST00000436978 SKA1Q96BD8 255 aa16.32■□□□□ 0.2
PTPN13-204ENST00000436978 TBCBQ99426 244 aa16.32■□□□□ 0.2
PTPN13-204ENST00000436978 PRRG3Q9BZD7 231 aa16.32■□□□□ 0.2
PTPN13-204ENST00000436978 IL1RL2Q9HB29 575 aa16.32■□□□□ 0.2
PTPN13-204ENST00000436978 DDTLA6NHG4 134 aaPredicted RBP16.32■□□□□ 0.2
PTPN13-204ENST00000436978 PROSCO94903 275 aa16.32■□□□□ 0.2
PTPN13-204ENST00000436978 DARSP14868 501 aaKnown RBP16.32■□□□□ 0.2
PTPN13-204ENST00000436978 ADIGQ0VDE8 80 aa16.32■□□□□ 0.2
PTPN13-204ENST00000436978 ACAP1Q15027 740 aa16.32■□□□□ 0.2
PTPN13-204ENST00000436978 CCDC153Q494R4 210 aa16.32■□□□□ 0.2
PTPN13-204ENST00000436978 CHD4Q14839 1912 aa16.32■□□□□ 0.2
PTPN13-204ENST00000436978 PHF20L1A8MW92 1017 aa16.32■□□□□ 0.2
PTPN13-204ENST00000436978 CES2O00748 559 aa16.32■□□□□ 0.2
PTPN13-204ENST00000436978 PQBP1O60828 265 aaKnown RBP16.32■□□□□ 0.2
PTPN13-204ENST00000436978 IARS2Q9NSE4 1012 aaKnown RBP16.32■□□□□ 0.2
PTPN13-204ENST00000436978 IMPAD1Q9NX62 359 aa16.32■□□□□ 0.2
PTPN13-204ENST00000436978 STARD13Q9Y3M8 1113 aa16.32■□□□□ 0.2
PTPN13-204ENST00000436978 MGAT4DA6NG13 374 aa16.32■□□□□ 0.2
PTPN13-204ENST00000436978 HACD1B0YJ81 288 aa16.32■□□□□ 0.2
PTPN13-204ENST00000436978 CENPAP49450 140 aa16.32■□□□□ 0.2
PTPN13-204ENST00000436978 INHBEP58166 350 aa16.32■□□□□ 0.2
PTPN13-204ENST00000436978 CCNG2Q16589 344 aa16.32■□□□□ 0.2
PTPN13-204ENST00000436978 CDR2LQ86X02 465 aaPredicted RBP16.32■□□□□ 0.2
PTPN13-204ENST00000436978 DNAJB3Q8WWF6 145 aa16.32■□□□□ 0.2
PTPN13-204ENST00000436978 CCDC3Q9BQI4 270 aa16.32■□□□□ 0.2
PTPN13-204ENST00000436978 ASCC2Q9H1I8 757 aaPredicted RBP16.32■□□□□ 0.2
PTPN13-204ENST00000436978 HPSEQ9Y251 543 aa16.32■□□□□ 0.2
PTPN13-204ENST00000436978 ALBP02768 609 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 RAG1P15918 1043 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 TOB1P50616 345 aaPredicted RBP16.31■□□□□ 0.2
PTPN13-204ENST00000436978 LRRC8DQ7L1W4 858 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 LZTR1Q8N653 840 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 POP1Q99575 1024 aaKnown RBP16.31■□□□□ 0.2
PTPN13-204ENST00000436978 FICDQ9BVA6 458 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 CCT8L1PA6NM43 557 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 MICAL2O94851 1124 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 PCYT1AP49585 367 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 CXCL9Q07325 125 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 PKN2Q16513 984 aaKnown RBP16.31■□□□□ 0.2
PTPN13-204ENST00000436978 ABRAQ8N0Z2 381 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 AHSPQ9NZD4 102 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 PLEKP08567 350 aaPredicted RBP16.31■□□□□ 0.2
PTPN13-204ENST00000436978 EPB42P16452 691 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 PSEN2P49810 448 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 NUDT2P50583 147 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 PRKAA2P54646 552 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 REPS1Q96D71 796 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 ZNF229Q9UJW7 825 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 THRAP10827 490 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 CASP4P49662 377 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 MAD2L1Q13257 205 aaPredicted RBP16.31■□□□□ 0.2
PTPN13-204ENST00000436978 SLC30A10Q6XR72 485 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 JADE3Q92613 823 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 WNT10BO00744 389 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 SUPT7LO94864 414 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 TPBGLP0DKB5 382 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 SPANXN3Q5MJ09 141 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 DEFB128Q7Z7B8 93 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 HASPINQ8TF76 798 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 TUBGCP3Q96CW5 907 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 RPS6KB2Q9UBS0 482 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 TRHDEQ9UKU6 1024 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 A0A087X0T9 212 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 A0A1B0GW55 424 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 CBX4O00257 560 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 FAM228BP0C875 321 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 DUX4L2P0CJ85 424 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 DUX4L3P0CJ86 424 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 DUX4L4P0CJ87 422 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 DUX4L5P0CJ88 424 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 DUX4L6P0CJ89 424 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 DUX4L7P0CJ90 424 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 PCNAP12004 261 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 MYL4P12829 197 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 SIKE1Q9BRV8 207 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 PRKD2Q9BZL6 878 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 DUX4Q9UBX2 424 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 SLC24A2Q9UI40 661 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 PAX3P23760 479 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 GUCA1AP43080 201 aaPredicted RBP16.31■□□□□ 0.2
PTPN13-204ENST00000436978 GRTP1Q5TC63 336 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 RXFP2Q8WXD0 754 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 CASKIN2Q8WXE0 1202 aa16.31■□□□□ 0.2
PTPN13-204ENST00000436978 THUMPD3Q9BV44 507 aaKnown RBP16.31■□□□□ 0.2
PTPN13-204ENST00000436978 SERPINF2P08697 491 aa16.3■□□□□ 0.2
PTPN13-204ENST00000436978 POLR2LP62875 67 aaKnown RBP16.3■□□□□ 0.2
PTPN13-204ENST00000436978 PLOD1Q02809 727 aaPredicted RBP16.3■□□□□ 0.2
PTPN13-204ENST00000436978 IFNEQ86WN2 208 aa16.3■□□□□ 0.2
PTPN13-204ENST00000436978 IDI2Q9BXS1 227 aa16.3■□□□□ 0.2
PTPN13-204ENST00000436978 TSPAN16Q9UKR8 245 aa16.3■□□□□ 0.2
PTPN13-204ENST00000436978 B2RBV5 119 aa16.3■□□□□ 0.2
PTPN13-204ENST00000436978 BTKQ06187 659 aa16.3■□□□□ 0.2
PTPN13-204ENST00000436978 ZNF268Q14587 947 aaPredicted RBP16.3■□□□□ 0.2
PTPN13-204ENST00000436978 OTOAQ7RTW8 1153 aa16.3■□□□□ 0.2
PTPN13-204ENST00000436978 FAM111AQ96PZ2 611 aa16.3■□□□□ 0.2
PTPN13-204ENST00000436978 PDCD2LQ9BRP1 358 aa16.3■□□□□ 0.2
PTPN13-204ENST00000436978 DCLK3Q9C098 648 aa16.3■□□□□ 0.2
PTPN13-204ENST00000436978 KRT84Q9NSB2 600 aa16.3■□□□□ 0.2
PTPN13-204ENST00000436978 COPG1Q9Y678 874 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms