RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 C10orf120Q5SQS8 335 aa17.55■□□□□ 0.4
CALD1-209ENST00000436461 HECTD3Q5T447 861 aa17.55■□□□□ 0.4
CALD1-209ENST00000436461 SNX30Q5VWJ9 437 aa17.55■□□□□ 0.4
CALD1-209ENST00000436461 RSRC2Q7L4I2 434 aaKnown RBP17.55■□□□□ 0.4
CALD1-209ENST00000436461 ARHGAP18Q8N392 663 aa17.55■□□□□ 0.4
CALD1-209ENST00000436461 SLC35G2Q8TBE7 412 aa17.55■□□□□ 0.4
CALD1-209ENST00000436461 ZNF564Q8TBZ8 553 aaPredicted RBP17.55■□□□□ 0.4
CALD1-209ENST00000436461 RXFP2Q8WXD0 754 aa17.55■□□□□ 0.4
CALD1-209ENST00000436461 RIPOR3Q96MK2 946 aa17.55■□□□□ 0.4
CALD1-209ENST00000436461 SLC2A13Q96QE2 648 aa17.55■□□□□ 0.4
CALD1-209ENST00000436461 RAB6CQ9H0N0 254 aa17.55■□□□□ 0.4
CALD1-209ENST00000436461 ASNSD1Q9NWL6 643 aa17.55■□□□□ 0.4
CALD1-209ENST00000436461 CLIC5Q9NZA1 410 aa17.55■□□□□ 0.4
CALD1-209ENST00000436461 CALCOCO1Q9P1Z2 691 aa17.55■□□□□ 0.4
CALD1-209ENST00000436461 HELZP42694 1942 aaKnown RBP17.54■□□□□ 0.4
CALD1-209ENST00000436461 SYNJ2BP-COX16A0A087WUM0 186 aa17.54■□□□□ 0.4
CALD1-209ENST00000436461 C2CD4BA6NLJ0 364 aa17.54■□□□□ 0.4
CALD1-209ENST00000436461 MSI1O43347 362 aaKnown RBP17.54■□□□□ 0.4
CALD1-209ENST00000436461 GLI1P08151 1106 aa17.54■□□□□ 0.4
CALD1-209ENST00000436461 RALAP11233 206 aa17.54■□□□□ 0.4
CALD1-209ENST00000436461 SCNN1AP37088 669 aa17.54■□□□□ 0.4
CALD1-209ENST00000436461 PPP3CCP48454 512 aa17.54■□□□□ 0.4
CALD1-209ENST00000436461 CDO1Q16878 200 aa17.54■□□□□ 0.4
CALD1-209ENST00000436461 C15orf59Q2T9L4 293 aaPredicted RBP17.54■□□□□ 0.4
CALD1-209ENST00000436461 SH3PXD2AQ5TCZ1 1133 aa17.54■□□□□ 0.4
CALD1-209ENST00000436461 MIB1Q86YT6 1006 aa17.54■□□□□ 0.4
CALD1-209ENST00000436461 NPAS3Q8IXF0 933 aa17.54■□□□□ 0.4
CALD1-209ENST00000436461 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.54■□□□□ 0.4
CALD1-209ENST00000436461 RNF139Q8WU17 664 aa17.54■□□□□ 0.4
CALD1-209ENST00000436461 SUSD6Q92537 303 aa17.54■□□□□ 0.4
CALD1-209ENST00000436461 FGF13Q92913 245 aa17.54■□□□□ 0.4
CALD1-209ENST00000436461 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.54■□□□□ 0.41e-8■■□□□ 11.4
CALD1-209ENST00000436461 COX16Q9P0S2 106 aa17.54■□□□□ 0.4
CALD1-209ENST00000436461 RASAL2Q9UJF2 1139 aa17.54■□□□□ 0.4
CALD1-209ENST00000436461 ANAPC7Q9UJX3 599 aa17.54■□□□□ 0.4
CALD1-209ENST00000436461 INTUQ9ULD6 942 aa17.54■□□□□ 0.4
CALD1-209ENST00000436461 SCINQ9Y6U3 715 aa17.54■□□□□ 0.4
CALD1-209ENST00000436461 BUB1O43683 1085 aa17.54■□□□□ 0.4
CALD1-209ENST00000436461 FGF19O95750 216 aa17.54■□□□□ 0.4
CALD1-209ENST00000436461 CCDC175P0C221 793 aa17.54■□□□□ 0.4
CALD1-209ENST00000436461 PDGFRAP16234 1089 aa17.54■□□□□ 0.4
CALD1-209ENST00000436461 MATKP42679 507 aa17.54■□□□□ 0.4
CALD1-209ENST00000436461 MTHFRP42898 656 aa17.54■□□□□ 0.4
CALD1-209ENST00000436461 ATXN1P54253 815 aaKnown RBP17.54■□□□□ 0.4
CALD1-209ENST00000436461 ATP11AP98196 1134 aa17.54■□□□□ 0.4
CALD1-209ENST00000436461 ZNF252P-AS1Q0IIN9 211 aa17.54■□□□□ 0.4
CALD1-209ENST00000436461 SMAD4Q13485 552 aaKnown RBP17.54■□□□□ 0.4
CALD1-209ENST00000436461 OTUD1Q5VV17 481 aaPredicted RBP17.54■□□□□ 0.4
CALD1-209ENST00000436461 DAB2IPQ5VWQ8 1189 aa17.54■□□□□ 0.4
CALD1-209ENST00000436461 TAC4Q86UU9 113 aa17.54■□□□□ 0.4
CALD1-209ENST00000436461 TTC16Q8NEE8 873 aa17.54■□□□□ 0.4
CALD1-209ENST00000436461 DQX1Q8TE96 717 aaKnown RBP17.54■□□□□ 0.4
CALD1-209ENST00000436461 RFFLQ8WZ73 363 aa17.54■□□□□ 0.4
CALD1-209ENST00000436461 MYADMQ96S97 322 aa17.54■□□□□ 0.4
CALD1-209ENST00000436461 NACA2Q9H009 215 aa17.54■□□□□ 0.4
CALD1-209ENST00000436461 MRPL47Q9HD33 250 aaKnown RBP17.54■□□□□ 0.4
CALD1-209ENST00000436461 LUC7LQ9NQ29 371 aaKnown RBP17.54■□□□□ 0.4
CALD1-209ENST00000436461 SMPD4Q9NXE4 827 aa17.54■□□□□ 0.4
CALD1-209ENST00000436461 PPP2R2CQ9Y2T4 447 aa17.54■□□□□ 0.4
CALD1-209ENST00000436461 TMEM191CA6NGB0 347 aa17.53■□□□□ 0.4
CALD1-209ENST00000436461 CKMP06732 381 aa17.53■□□□□ 0.4
CALD1-209ENST00000436461 HDCP19113 662 aa17.53■□□□□ 0.4
CALD1-209ENST00000436461 GPD1P21695 349 aa17.53■□□□□ 0.4
CALD1-209ENST00000436461 NOS2P35228 1153 aa17.53■□□□□ 0.4
CALD1-209ENST00000436461 SULT1E1P49888 294 aa17.53■□□□□ 0.4
CALD1-209ENST00000436461 ZXDBP98169 803 aa17.53■□□□□ 0.4
CALD1-209ENST00000436461 CCDC14Q49A88 953 aa17.53■□□□□ 0.4
CALD1-209ENST00000436461 ARHGAP15Q53QZ3 475 aa17.53■□□□□ 0.4
CALD1-209ENST00000436461 CPNE8Q86YQ8 564 aa17.53■□□□□ 0.4
CALD1-209ENST00000436461 TBCBQ99426 244 aa17.53■□□□□ 0.4
CALD1-209ENST00000436461 TASP1Q9H6P5 420 aa17.53■□□□□ 0.4
CALD1-209ENST00000436461 NUP210Q8TEM1 1887 aaPredicted RBP17.53■□□□□ 0.4
CALD1-209ENST00000436461 MACROD2A1Z1Q3 448 aa17.52■□□□□ 0.4
CALD1-209ENST00000436461 PJA2O43164 708 aa17.52■□□□□ 0.4
CALD1-209ENST00000436461 CCP110O43303 1012 aa17.52■□□□□ 0.4
CALD1-209ENST00000436461 HMBSP08397 361 aa17.52■□□□□ 0.4
CALD1-209ENST00000436461 MBL2P11226 248 aaPredicted RBP17.52■□□□□ 0.4
CALD1-209ENST00000436461 GBP2P32456 591 aaPredicted RBP17.52■□□□□ 0.4
CALD1-209ENST00000436461 ATP5C1P36542 298 aaKnown RBP17.52■□□□□ 0.4
CALD1-209ENST00000436461 NOP2P46087 812 aaKnown RBP17.52■□□□□ 0.4
CALD1-209ENST00000436461 TUBP50607 506 aa17.52■□□□□ 0.4
CALD1-209ENST00000436461 NME3Q13232 169 aa17.52■□□□□ 0.4
CALD1-209ENST00000436461 DDX23Q9BUQ8 820 aaKnown RBP17.52■□□□□ 0.4
CALD1-209ENST00000436461 LZTFL1Q9NQ48 299 aa17.52■□□□□ 0.4
CALD1-209ENST00000436461 GKN1Q9NS71 199 aa17.52■□□□□ 0.4
CALD1-209ENST00000436461 TRMT1Q9NXH9 659 aaKnown RBP17.52■□□□□ 0.4
CALD1-209ENST00000436461 CCL26Q9Y258 94 aa17.52■□□□□ 0.4
CALD1-209ENST00000436461 PAXBP1Q9Y5B6 917 aa17.52■□□□□ 0.4
CALD1-209ENST00000436461 TRAV19A0A0A6YYK7 116 aa17.51■□□□□ 0.39
CALD1-209ENST00000436461 USP27XA6NNY8 438 aa17.51■□□□□ 0.39
CALD1-209ENST00000436461 TMEM110-MUSTN1A8MSY1 372 aa17.51■□□□□ 0.39
CALD1-209ENST00000436461 M0QYT0 321 aa17.51■□□□□ 0.39
CALD1-209ENST00000436461 SCAMP3O14828 347 aaKnown RBP17.51■□□□□ 0.39
CALD1-209ENST00000436461 PRAMEF12O95522 483 aa17.51■□□□□ 0.39
CALD1-209ENST00000436461 OLFM2O95897 454 aa17.51■□□□□ 0.39
CALD1-209ENST00000436461 TRUB2O95900 331 aaKnown RBP17.51■□□□□ 0.39
CALD1-209ENST00000436461 IRF1P10914 325 aa17.51■□□□□ 0.39
CALD1-209ENST00000436461 PSMA2P25787 234 aa17.51■□□□□ 0.39
CALD1-209ENST00000436461 SDC4P31431 198 aa17.51■□□□□ 0.39
CALD1-209ENST00000436461 ARHGAP25P42331 645 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms