RNA–Protein interactions for RNA: ENST00000436427.1

YBX1-203, Transcript of Y-box binding protein 1, humanhuman

TSL 1 (best)

Gene YBX1, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-203ENST00000436427 HADHQ16836 314 aaKnown RBP22.28■■□□□ 1.16
YBX1-203ENST00000436427 SCYL2Q6P3W7 929 aa22.28■■□□□ 1.16
YBX1-203ENST00000436427 RHOT1Q8IXI2 618 aa22.28■■□□□ 1.16
YBX1-203ENST00000436427 UBL4BQ8N7F7 174 aa22.28■■□□□ 1.16
YBX1-203ENST00000436427 DQX1Q8TE96 717 aaKnown RBP22.28■■□□□ 1.16
YBX1-203ENST00000436427 CENPIQ92674 756 aaPredicted RBP22.28■■□□□ 1.16
YBX1-203ENST00000436427 CD101Q93033 1021 aa22.28■■□□□ 1.16
YBX1-203ENST00000436427 NT5C3BQ969T7 300 aa22.28■■□□□ 1.16
YBX1-203ENST00000436427 TTYH1Q9H313 450 aaPredicted RBP22.28■■□□□ 1.16
YBX1-203ENST00000436427 ZNF334Q9HCZ1 680 aaPredicted RBP22.28■■□□□ 1.16
YBX1-203ENST00000436427 PCSK1NQ9UHG2 260 aa22.28■■□□□ 1.16
YBX1-203ENST00000436427 TMEM265A0A087WTH1 108 aa22.27■■□□□ 1.16
YBX1-203ENST00000436427 HNRNPA1P09651 372 aaKnown RBP eCLIP22.27■■□□□ 1.16
YBX1-203ENST00000436427 MIPP30301 263 aa22.27■■□□□ 1.16
YBX1-203ENST00000436427 HOXA9P31269 272 aa22.27■■□□□ 1.16
YBX1-203ENST00000436427 CTNNA1P35221 906 aaKnown RBP22.27■■□□□ 1.16
YBX1-203ENST00000436427 PCK1P35558 622 aa22.27■■□□□ 1.16
YBX1-203ENST00000436427 ATXN1P54253 815 aaKnown RBP22.27■■□□□ 1.16
YBX1-203ENST00000436427 HDAC4P56524 1084 aa22.27■■□□□ 1.16
YBX1-203ENST00000436427 DEUP1Q05D60 604 aa22.27■■□□□ 1.16
YBX1-203ENST00000436427 OTUD1Q5VV17 481 aaPredicted RBP22.27■■□□□ 1.16
YBX1-203ENST00000436427 STRADAQ7RTN6 431 aa22.27■■□□□ 1.16
YBX1-203ENST00000436427 TAC4Q86UU9 113 aa22.27■■□□□ 1.16
YBX1-203ENST00000436427 HS6ST3Q8IZP7 471 aa22.27■■□□□ 1.16
YBX1-203ENST00000436427 KRT35Q92764 455 aa22.27■■□□□ 1.16
YBX1-203ENST00000436427 CORO1BQ9BR76 489 aa22.27■■□□□ 1.16
YBX1-203ENST00000436427 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.27■■□□□ 1.16
YBX1-203ENST00000436427 DDIT4Q9NX09 232 aa22.27■■□□□ 1.16
YBX1-203ENST00000436427 ZDHHC7Q9NXF8 308 aa22.27■■□□□ 1.16
YBX1-203ENST00000436427 CALCOCO1Q9P1Z2 691 aa22.27■■□□□ 1.16
YBX1-203ENST00000436427 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.27■■□□□ 1.16
YBX1-203ENST00000436427 CCDC66A2RUB6 948 aa22.26■■□□□ 1.15
YBX1-203ENST00000436427 ZNF840PA6NDX5 716 aa22.26■■□□□ 1.15
YBX1-203ENST00000436427 XYLBO75191 536 aa22.26■■□□□ 1.15
YBX1-203ENST00000436427 TRUB2O95900 331 aaKnown RBP22.26■■□□□ 1.15
YBX1-203ENST00000436427 CTNNA2P26232 953 aa22.26■■□□□ 1.15
YBX1-203ENST00000436427 RDXP35241 583 aaKnown RBP22.26■■□□□ 1.15
YBX1-203ENST00000436427 MARCKSL1P49006 195 aa22.26■■□□□ 1.15
YBX1-203ENST00000436427 TCEAL5Q5H9L2 206 aa22.26■■□□□ 1.15
YBX1-203ENST00000436427 C10orf120Q5SQS8 335 aa22.26■■□□□ 1.15
YBX1-203ENST00000436427 PRPF38BQ5VTL8 546 aaKnown RBP22.26■■□□□ 1.15
YBX1-203ENST00000436427 NCAPGQ9BPX3 1015 aa22.26■■□□□ 1.15
YBX1-203ENST00000436427 CCSER2Q9H7U1 834 aa22.26■■□□□ 1.15
YBX1-203ENST00000436427 ZWILCHQ9H900 591 aa22.26■■□□□ 1.15
YBX1-203ENST00000436427 ASAH2Q9NR71 780 aa22.26■■□□□ 1.15
YBX1-203ENST00000436427 SFMBT1Q9UHJ3 866 aa22.26■■□□□ 1.15
YBX1-203ENST00000436427 USP18Q9UMW8 372 aa22.26■■□□□ 1.15
YBX1-203ENST00000436427 KCNK3O14649 394 aa22.26■■□□□ 1.15
YBX1-203ENST00000436427 DDX3YO15523 660 aaKnown RBP22.26■■□□□ 1.15
YBX1-203ENST00000436427 PSTPIP1O43586 416 aa22.26■■□□□ 1.15
YBX1-203ENST00000436427 PRPSAP2O60256 369 aa22.26■■□□□ 1.15
YBX1-203ENST00000436427 TLR5O60602 858 aa22.26■■□□□ 1.15
YBX1-203ENST00000436427 TADA3O75528 432 aa22.26■■□□□ 1.15
YBX1-203ENST00000436427 GABRR2P28476 465 aa22.26■■□□□ 1.15
YBX1-203ENST00000436427 PPP3CCP48454 512 aa22.26■■□□□ 1.15
YBX1-203ENST00000436427 SLC25A11Q02978 314 aaKnown RBP22.26■■□□□ 1.15
YBX1-203ENST00000436427 GRIN2CQ14957 1233 aa22.26■■□□□ 1.15
YBX1-203ENST00000436427 PABPC1LQ4VXU2 614 aaKnown RBP22.26■■□□□ 1.15
YBX1-203ENST00000436427 ZFYVE27Q5T4F4 411 aa22.26■■□□□ 1.15
YBX1-203ENST00000436427 PAPD7Q5XG87 772 aaKnown RBP22.26■■□□□ 1.15
YBX1-203ENST00000436427 TMC8Q8IU68 726 aa22.26■■□□□ 1.15
YBX1-203ENST00000436427 VN1R2Q8NFZ6 395 aa22.26■■□□□ 1.15
YBX1-203ENST00000436427 UBE2Q2Q8WVN8 375 aa22.26■■□□□ 1.15
YBX1-203ENST00000436427 CASP10Q92851 521 aa22.26■■□□□ 1.15
YBX1-203ENST00000436427 SMOC2Q9H3U7 446 aa22.26■■□□□ 1.15
YBX1-203ENST00000436427 OLA1Q9NTK5 396 aaKnown RBP22.26■■□□□ 1.15
YBX1-203ENST00000436427 PIGVQ9NUD9 493 aa22.26■■□□□ 1.15
YBX1-203ENST00000436427 HCFC1R1Q9NWW0 138 aa22.26■■□□□ 1.15
YBX1-203ENST00000436427 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.26■■□□□ 1.15
YBX1-203ENST00000436427 SNX12Q9UMY4 172 aa22.26■■□□□ 1.15
YBX1-203ENST00000436427 PCDHA3Q9Y5H8 950 aa22.26■■□□□ 1.15
YBX1-203ENST00000436427 CCDC195A0A1B0GUA6 201 aa22.25■■□□□ 1.15
YBX1-203ENST00000436427 URI1O94763 535 aaPredicted RBP22.25■■□□□ 1.15
YBX1-203ENST00000436427 ENDOD1O94919 500 aa22.25■■□□□ 1.15
YBX1-203ENST00000436427 TBX18O95935 607 aa22.25■■□□□ 1.15
YBX1-203ENST00000436427 MYL4P12829 197 aa22.25■■□□□ 1.15
YBX1-203ENST00000436427 CXCR5P32302 372 aa22.25■■□□□ 1.15
YBX1-203ENST00000436427 GBP1P32455 592 aa22.25■■□□□ 1.15
YBX1-203ENST00000436427 EFEMP1Q12805 493 aa22.25■■□□□ 1.15
YBX1-203ENST00000436427 SMTNL2Q2TAL5 461 aa22.25■■□□□ 1.15
YBX1-203ENST00000436427 SNX30Q5VWJ9 437 aa22.25■■□□□ 1.15
YBX1-203ENST00000436427 SND1Q7KZF4 910 aaKnown RBP eCLIP22.25■■□□□ 1.15
YBX1-203ENST00000436427 TADA2BQ86TJ2 420 aa22.25■■□□□ 1.15
YBX1-203ENST00000436427 FAM131BQ86XD5 332 aa22.25■■□□□ 1.15
YBX1-203ENST00000436427 PGAP3Q96FM1 320 aaPredicted RBP22.25■■□□□ 1.15
YBX1-203ENST00000436427 CDK5RAP1Q96SZ6 601 aaKnown RBP22.25■■□□□ 1.15
YBX1-203ENST00000436427 PRKD2Q9BZL6 878 aa22.25■■□□□ 1.15
YBX1-203ENST00000436427 NACA2Q9H009 215 aa22.25■■□□□ 1.15
YBX1-203ENST00000436427 IL21Q9HBE4 155 aa22.25■■□□□ 1.15
YBX1-203ENST00000436427 SAR1BQ9Y6B6 198 aa22.25■■□□□ 1.15
YBX1-203ENST00000436427 SOX1O00570 391 aaPredicted RBP22.24■■□□□ 1.15
YBX1-203ENST00000436427 MDM4O15151 490 aa22.24■■□□□ 1.15
YBX1-203ENST00000436427 MSI1O43347 362 aaKnown RBP22.24■■□□□ 1.15
YBX1-203ENST00000436427 F9P00740 461 aa22.24■■□□□ 1.15
YBX1-203ENST00000436427 F11P03951 625 aa22.24■■□□□ 1.15
YBX1-203ENST00000436427 PTPN2P17706 415 aa22.24■■□□□ 1.15
YBX1-203ENST00000436427 IL1R2P27930 398 aa22.24■■□□□ 1.15
YBX1-203ENST00000436427 RWDD2BP57060 319 aa22.24■■□□□ 1.15
YBX1-203ENST00000436427 HYAL1Q12794 435 aa22.24■■□□□ 1.15
YBX1-203ENST00000436427 KCNT1Q5JUK3 1230 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms