RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 EDEM1Q92611 657 aa19.2■□□□□ 0.66
HMGN1-207ENST00000436324 BHMTQ93088 406 aa19.2■□□□□ 0.66
HMGN1-207ENST00000436324 ACDQ96AP0 544 aa19.2■□□□□ 0.66
HMGN1-207ENST00000436324 BBS2Q9BXC9 721 aa19.2■□□□□ 0.66
HMGN1-207ENST00000436324 ZDHHC4Q9NPG8 344 aa19.2■□□□□ 0.66
HMGN1-207ENST00000436324 MARCH2Q9P0N8 246 aa19.2■□□□□ 0.66
HMGN1-207ENST00000436324 RIF1Q5UIP0 2472 aaKnown RBP19.19■□□□□ 0.66
HMGN1-207ENST00000436324 TBC1D3BA6NDS4 549 aa19.19■□□□□ 0.66
HMGN1-207ENST00000436324 YJEFN3A6XGL0 299 aa19.19■□□□□ 0.66
HMGN1-207ENST00000436324 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.19■□□□□ 0.66
HMGN1-207ENST00000436324 E7ENQ6 273 aa19.19■□□□□ 0.66
HMGN1-207ENST00000436324 TRIM24O15164 1050 aa19.19■□□□□ 0.66
HMGN1-207ENST00000436324 HOXC11O43248 304 aaPredicted RBP19.19■□□□□ 0.66
HMGN1-207ENST00000436324 TULP3O75386 442 aa19.19■□□□□ 0.66
HMGN1-207ENST00000436324 GABBR2O75899 941 aa19.19■□□□□ 0.66
HMGN1-207ENST00000436324 HOXA6P31267 233 aa19.19■□□□□ 0.66
HMGN1-207ENST00000436324 EIF2DP41214 584 aaKnown RBP19.19■□□□□ 0.66
HMGN1-207ENST00000436324 GRIA2P42262 883 aa19.19■□□□□ 0.66
HMGN1-207ENST00000436324 ZNF132P52740 706 aa19.19■□□□□ 0.66
HMGN1-207ENST00000436324 COG7P83436 770 aa19.19■□□□□ 0.66
HMGN1-207ENST00000436324 STILQ15468 1287 aa19.19■□□□□ 0.66
HMGN1-207ENST00000436324 ARHGAP44Q17R89 818 aa19.19■□□□□ 0.66
HMGN1-207ENST00000436324 PMF1Q6P1K2 205 aa19.19■□□□□ 0.66
HMGN1-207ENST00000436324 GBP6Q6ZN66 633 aa19.19■□□□□ 0.66
HMGN1-207ENST00000436324 BHLHA9Q7RTU4 235 aa19.19■□□□□ 0.66
HMGN1-207ENST00000436324 CCDC26Q8TAB7 109 aa19.19■□□□□ 0.66
HMGN1-207ENST00000436324 KCTD13Q8WZ19 329 aa19.19■□□□□ 0.66
HMGN1-207ENST00000436324 GBP4Q96PP9 640 aa19.19■□□□□ 0.66
HMGN1-207ENST00000436324 THAP9Q9H5L6 903 aa19.19■□□□□ 0.66
HMGN1-207ENST00000436324 DEC1Q9P2X7 70 aa19.19■□□□□ 0.66
HMGN1-207ENST00000436324 DACH1Q9UI36 760 aa19.19■□□□□ 0.66
HMGN1-207ENST00000436324 STRIP2Q9ULQ0 834 aa19.19■□□□□ 0.66
HMGN1-207ENST00000436324 MYOFQ9NZM1 2061 aa19.18■□□□□ 0.66
HMGN1-207ENST00000436324 FAM186AA6NE01 2351 aa19.18■□□□□ 0.66
HMGN1-207ENST00000436324 KLF8O95600 359 aaPredicted RBP19.18■□□□□ 0.66
HMGN1-207ENST00000436324 KLKB1P03952 638 aa19.18■□□□□ 0.66
HMGN1-207ENST00000436324 CORO1AP31146 461 aaKnown RBP19.18■□□□□ 0.66
HMGN1-207ENST00000436324 USP8P40818 1118 aa19.18■□□□□ 0.66
HMGN1-207ENST00000436324 MFAP3P55082 362 aa19.18■□□□□ 0.66
HMGN1-207ENST00000436324 EXOC3L4Q17RC7 722 aa19.18■□□□□ 0.66
HMGN1-207ENST00000436324 BSPRYQ5W0U4 402 aa19.18■□□□□ 0.66
HMGN1-207ENST00000436324 TRIM65Q6PJ69 517 aa19.18■□□□□ 0.66
HMGN1-207ENST00000436324 Q6ZNB5 142 aa19.18■□□□□ 0.66
HMGN1-207ENST00000436324 ETFBKMTQ8IXQ9 262 aa19.18■□□□□ 0.66
HMGN1-207ENST00000436324 PHTF2Q8N3S3 785 aa19.18■□□□□ 0.66
HMGN1-207ENST00000436324 CAMKK1Q8N5S9 505 aa19.18■□□□□ 0.66
HMGN1-207ENST00000436324 ALLCQ8N6M5 410 aa19.18■□□□□ 0.66
HMGN1-207ENST00000436324 RNF139Q8WU17 664 aa19.18■□□□□ 0.66
HMGN1-207ENST00000436324 SLC35F5Q8WV83 523 aa19.18■□□□□ 0.66
HMGN1-207ENST00000436324 DNAJC17Q9NVM6 304 aaKnown RBP19.18■□□□□ 0.66
HMGN1-207ENST00000436324 PLK2Q9NYY3 685 aa19.18■□□□□ 0.66
HMGN1-207ENST00000436324 GMEB2Q9UKD1 530 aa19.18■□□□□ 0.66
HMGN1-207ENST00000436324 MYO15AQ9UKN7 3530 aa19.17■□□□□ 0.66
HMGN1-207ENST00000436324 AXIN1O15169 862 aa19.17■□□□□ 0.66
HMGN1-207ENST00000436324 LETM1O95202 739 aaPredicted RBP19.17■□□□□ 0.66
HMGN1-207ENST00000436324 APBB3O95704 486 aa19.17■□□□□ 0.66
HMGN1-207ENST00000436324 TYRP14679 529 aa19.17■□□□□ 0.66
HMGN1-207ENST00000436324 CNR2P34972 360 aa19.17■□□□□ 0.66
HMGN1-207ENST00000436324 DAOAP59103 153 aa19.17■□□□□ 0.66
HMGN1-207ENST00000436324 MRPS21P82921 87 aaKnown RBP19.17■□□□□ 0.66
HMGN1-207ENST00000436324 GRAMD4Q6IC98 578 aa19.17■□□□□ 0.66
HMGN1-207ENST00000436324 DENND1BQ6P3S1 775 aa19.17■□□□□ 0.66
HMGN1-207ENST00000436324 DENND1CQ8IV53 801 aa19.17■□□□□ 0.66
HMGN1-207ENST00000436324 FMNL3Q8IVF7 1028 aa19.17■□□□□ 0.66
HMGN1-207ENST00000436324 FAM114A1Q8IWE2 563 aa19.17■□□□□ 0.66
HMGN1-207ENST00000436324 TSTD1Q8NFU3 115 aa19.17■□□□□ 0.66
HMGN1-207ENST00000436324 GPT2Q8TD30 523 aa19.17■□□□□ 0.66
HMGN1-207ENST00000436324 CLEC4CQ8WTT0 213 aa19.17■□□□□ 0.66
HMGN1-207ENST00000436324 XPO6Q96QU8 1125 aaKnown RBP19.17■□□□□ 0.66
HMGN1-207ENST00000436324 MIS12Q9H081 205 aa19.17■□□□□ 0.66
HMGN1-207ENST00000436324 ACP6Q9NPH0 428 aa19.17■□□□□ 0.66
HMGN1-207ENST00000436324 CNGB3Q9NQW8 809 aa19.17■□□□□ 0.66
HMGN1-207ENST00000436324 WDR35Q9P2L0 1181 aa19.17■□□□□ 0.66
HMGN1-207ENST00000436324 SFMBT1Q9UHJ3 866 aa19.17■□□□□ 0.66
HMGN1-207ENST00000436324 CNTN6Q9UQ52 1028 aa19.17■□□□□ 0.66
HMGN1-207ENST00000436324 GPR179Q6PRD1 2367 aa19.17■□□□□ 0.66
HMGN1-207ENST00000436324 THAP12O43422 761 aa19.16■□□□□ 0.66
HMGN1-207ENST00000436324 RPP40O75818 363 aaKnown RBP19.16■□□□□ 0.66
HMGN1-207ENST00000436324 PRKCSHP14314 528 aaPredicted RBP19.16■□□□□ 0.66
HMGN1-207ENST00000436324 PON1P27169 355 aa19.16■□□□□ 0.66
HMGN1-207ENST00000436324 ERCC5P28715 1186 aaPredicted RBP19.16■□□□□ 0.66
HMGN1-207ENST00000436324 TNFRSF4P43489 277 aa19.16■□□□□ 0.66
HMGN1-207ENST00000436324 DGKEP52429 567 aa19.16■□□□□ 0.66
HMGN1-207ENST00000436324 MAN2A1Q16706 1144 aa19.16■□□□□ 0.66
HMGN1-207ENST00000436324 C10orf76Q5T2E6 689 aa19.16■□□□□ 0.66
HMGN1-207ENST00000436324 LAIR1Q6GTX8 287 aa19.16■□□□□ 0.66
HMGN1-207ENST00000436324 ENOSF1Q7L5Y1 443 aa19.16■□□□□ 0.66
HMGN1-207ENST00000436324 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.16■□□□□ 0.66
HMGN1-207ENST00000436324 IL17RCQ8NAC3 791 aa19.16■□□□□ 0.66
HMGN1-207ENST00000436324 TXNDC5Q8NBS9 432 aaKnown RBP19.16■□□□□ 0.66
HMGN1-207ENST00000436324 DCLK3Q9C098 648 aa19.16■□□□□ 0.66
HMGN1-207ENST00000436324 ST7Q9NRC1 585 aa19.16■□□□□ 0.66
HMGN1-207ENST00000436324 OLA1Q9NTK5 396 aaKnown RBP19.16■□□□□ 0.66
HMGN1-207ENST00000436324 APEX2Q9UBZ4 518 aa19.16■□□□□ 0.66
HMGN1-207ENST00000436324 AGO1Q9UL18 857 aaKnown RBP19.16■□□□□ 0.66
HMGN1-207ENST00000436324 MMP17Q9ULZ9 603 aa19.16■□□□□ 0.66
HMGN1-207ENST00000436324 INVSQ9Y283 1065 aa19.16■□□□□ 0.66
HMGN1-207ENST00000436324 ZNF510Q9Y2H8 683 aa19.16■□□□□ 0.66
HMGN1-207ENST00000436324 A0A0A0MRY4 1105 aa19.15■□□□□ 0.66
HMGN1-207ENST00000436324 SGK1O00141 431 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms