RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 SLC9A9Q8IVB4 645 aa8.19□□□□□ -1.1
VPS50-203ENST00000436177 BBS7Q8IWZ6 715 aa8.19□□□□□ -1.1
VPS50-203ENST00000436177 CHPFQ8IZ52 775 aa8.19□□□□□ -1.1
VPS50-203ENST00000436177 FUKQ8N0W3 1084 aa8.19□□□□□ -1.1
VPS50-203ENST00000436177 HDDC3Q8N4P3 179 aa8.19□□□□□ -1.1
VPS50-203ENST00000436177 NAT16Q8N8M0 369 aa8.19□□□□□ -1.1
VPS50-203ENST00000436177 TERB1Q8NA31 727 aa8.19□□□□□ -1.1
VPS50-203ENST00000436177 RLN3Q8WXF3 142 aa8.19□□□□□ -1.1
VPS50-203ENST00000436177 SPATA32Q96LK8 384 aa8.19□□□□□ -1.1
VPS50-203ENST00000436177 BBS2Q9BXC9 721 aa8.19□□□□□ -1.1
VPS50-203ENST00000436177 NT5C1AQ9BXI3 368 aa8.19□□□□□ -1.1
VPS50-203ENST00000436177 NIF3L1Q9GZT8 377 aa8.19□□□□□ -1.1
VPS50-203ENST00000436177 SLC32A1Q9H598 525 aa8.19□□□□□ -1.1
VPS50-203ENST00000436177 SPHK2Q9NRA0 654 aa8.19□□□□□ -1.1
VPS50-203ENST00000436177 TMEM30AQ9NV96 361 aa8.19□□□□□ -1.1
VPS50-203ENST00000436177 WDR35Q9P2L0 1181 aa8.19□□□□□ -1.1
VPS50-203ENST00000436177 SERTAD1Q9UHV2 236 aa8.19□□□□□ -1.1
VPS50-203ENST00000436177 PCDHA5Q9Y5H7 936 aa8.19□□□□□ -1.1
VPS50-203ENST00000436177 FAM208BQ5VWN6 2430 aa8.19□□□□□ -1.1
VPS50-203ENST00000436177 ZNF638Q14966 1978 aaKnown RBP8.19□□□□□ -1.1
VPS50-203ENST00000436177 KMT2BQ9UMN6 2715 aaPredicted RBP8.18□□□□□ -1.1
VPS50-203ENST00000436177 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.18□□□□□ -1.1
VPS50-203ENST00000436177 TNFRSF10BO14763 440 aa8.18□□□□□ -1.1
VPS50-203ENST00000436177 IKBKBO14920 756 aa8.18□□□□□ -1.1
VPS50-203ENST00000436177 CYP26A1O43174 497 aa8.18□□□□□ -1.1
VPS50-203ENST00000436177 ZNF217O75362 1048 aa8.18□□□□□ -1.1
VPS50-203ENST00000436177 KRT37O76014 449 aa8.18□□□□□ -1.1
VPS50-203ENST00000436177 ASS1P00966 412 aaKnown RBP8.18□□□□□ -1.1
VPS50-203ENST00000436177 HLA-DRAP01903 254 aa8.18□□□□□ -1.1
VPS50-203ENST00000436177 RALAP11233 206 aa8.18□□□□□ -1.1
VPS50-203ENST00000436177 PFKFB1P16118 471 aa8.18□□□□□ -1.1
VPS50-203ENST00000436177 CD58P19256 250 aa8.18□□□□□ -1.1
VPS50-203ENST00000436177 ACO1P21399 889 aaKnown RBP8.18□□□□□ -1.1
VPS50-203ENST00000436177 BCKDHBP21953 392 aa8.18□□□□□ -1.1
VPS50-203ENST00000436177 NR2F2P24468 414 aa8.18□□□□□ -1.1
VPS50-203ENST00000436177 PMLP29590 882 aa8.18□□□□□ -1.1
VPS50-203ENST00000436177 NTSR1P30989 418 aa8.18□□□□□ -1.1
VPS50-203ENST00000436177 RDXP35241 583 aaKnown RBP8.18□□□□□ -1.1
VPS50-203ENST00000436177 HOXD12P35452 270 aa8.18□□□□□ -1.1
VPS50-203ENST00000436177 KIR2DL1P43626 348 aaPredicted RBP8.18□□□□□ -1.1
VPS50-203ENST00000436177 VAMP7P51809 220 aa8.18□□□□□ -1.1
VPS50-203ENST00000436177 CLDN10P78369 228 aa8.18□□□□□ -1.1
VPS50-203ENST00000436177 KRT85P78386 507 aa8.18□□□□□ -1.1
VPS50-203ENST00000436177 SHC2P98077 582 aa8.18□□□□□ -1.1
VPS50-203ENST00000436177 RPL6Q02878 288 aaKnown RBP8.18□□□□□ -1.1
VPS50-203ENST00000436177 GFPT1Q06210 699 aaPredicted RBP8.18□□□□□ -1.1
VPS50-203ENST00000436177 STK4Q13043 487 aa8.18□□□□□ -1.1
VPS50-203ENST00000436177 STARD3Q14849 445 aa8.18□□□□□ -1.1
VPS50-203ENST00000436177 GAB4Q2WGN9 574 aa8.18□□□□□ -1.1
VPS50-203ENST00000436177 SH3PXD2AQ5TCZ1 1133 aa8.18□□□□□ -1.1
VPS50-203ENST00000436177 EMC10Q5UCC4 262 aa8.18□□□□□ -1.1
VPS50-203ENST00000436177 INTS8Q75QN2 995 aaKnown RBP8.18□□□□□ -1.1
VPS50-203ENST00000436177 SV2AQ7L0J3 742 aa8.18□□□□□ -1.1
VPS50-203ENST00000436177 RSRC2Q7L4I2 434 aaKnown RBP8.18□□□□□ -1.1
VPS50-203ENST00000436177 FAM186BQ8IYM0 893 aa8.18□□□□□ -1.1
VPS50-203ENST00000436177 TMEFF1Q8IYR6 380 aa8.18□□□□□ -1.1
VPS50-203ENST00000436177 CYP4X1Q8N118 509 aa8.18□□□□□ -1.1
VPS50-203ENST00000436177 TTC39CQ8N584 583 aa8.18□□□□□ -1.1
VPS50-203ENST00000436177 KIAA0895Q8NCT3 520 aa8.18□□□□□ -1.1
VPS50-203ENST00000436177 PLEKHO2Q8TD55 490 aa8.18□□□□□ -1.1
VPS50-203ENST00000436177 BHMTQ93088 406 aa8.18□□□□□ -1.1
VPS50-203ENST00000436177 PAGE5Q96GU1 130 aa8.18□□□□□ -1.1
VPS50-203ENST00000436177 CDK5RAP1Q96SZ6 601 aaKnown RBP8.18□□□□□ -1.1
VPS50-203ENST00000436177 MMRN2Q9H8L6 949 aa8.18□□□□□ -1.1
VPS50-203ENST00000436177 CYP3A43Q9HB55 503 aa8.18□□□□□ -1.1
VPS50-203ENST00000436177 ZDHHC4Q9NPG8 344 aa8.18□□□□□ -1.1
VPS50-203ENST00000436177 HMGXB4Q9UGU5 601 aa8.18□□□□□ -1.1
VPS50-203ENST00000436177 EVLQ9UI08 416 aaPredicted RBP8.18□□□□□ -1.1
VPS50-203ENST00000436177 DNMT3LQ9UJW3 386 aa8.18□□□□□ -1.1
VPS50-203ENST00000436177 NAGPAQ9UK23 515 aa8.18□□□□□ -1.1
VPS50-203ENST00000436177 NME7Q9Y5B8 376 aa8.18□□□□□ -1.1
VPS50-203ENST00000436177 RALGAPA1Q6GYQ0 2036 aa8.17□□□□□ -1.1
VPS50-203ENST00000436177 ZFYVE26Q68DK2 2539 aa8.17□□□□□ -1.1
VPS50-203ENST00000436177 A0A1B0GVL5 298 aa8.17□□□□□ -1.1
VPS50-203ENST00000436177 PATE3B3GLJ2 98 aa8.17□□□□□ -1.1
VPS50-203ENST00000436177 TM4SF5O14894 197 aa8.17□□□□□ -1.1
VPS50-203ENST00000436177 CACNG3O60359 315 aa8.17□□□□□ -1.1
VPS50-203ENST00000436177 STX10O60499 249 aa8.17□□□□□ -1.1
VPS50-203ENST00000436177 NDUFS2O75306 463 aa8.17□□□□□ -1.1
VPS50-203ENST00000436177 VNN1O95497 513 aa8.17□□□□□ -1.1
VPS50-203ENST00000436177 C4BPAP04003 597 aaKnown RBP8.17□□□□□ -1.1
VPS50-203ENST00000436177 CYBBP04839 570 aa8.17□□□□□ -1.1
VPS50-203ENST00000436177 CEACAM1P13688 526 aa8.17□□□□□ -1.1
VPS50-203ENST00000436177 TYRP14679 529 aa8.17□□□□□ -1.1
VPS50-203ENST00000436177 CMA1P23946 247 aa8.17□□□□□ -1.1
VPS50-203ENST00000436177 PSMC2P35998 433 aaKnown RBP8.17□□□□□ -1.1
VPS50-203ENST00000436177 WASP42768 502 aa8.17□□□□□ -1.1
VPS50-203ENST00000436177 PTGER3P43115 390 aa8.17□□□□□ -1.1
VPS50-203ENST00000436177 SYKP43405 635 aa8.17□□□□□ -1.1
VPS50-203ENST00000436177 ASPAP45381 313 aa8.17□□□□□ -1.1
VPS50-203ENST00000436177 GCLMP48507 274 aa8.17□□□□□ -1.1
VPS50-203ENST00000436177 RPIAP49247 311 aa8.17□□□□□ -1.1
VPS50-203ENST00000436177 DLG4P78352 724 aa8.17□□□□□ -1.1
VPS50-203ENST00000436177 IRX4P78413 519 aa8.17□□□□□ -1.1
VPS50-203ENST00000436177 MESP2Q0VG99 397 aa8.17□□□□□ -1.1
VPS50-203ENST00000436177 E2F5Q15329 346 aa8.17□□□□□ -1.1
VPS50-203ENST00000436177 SPDYCQ5MJ68 293 aa8.17□□□□□ -1.1
VPS50-203ENST00000436177 SYCP2LQ5T4T6 812 aa8.17□□□□□ -1.1
VPS50-203ENST00000436177 SNX30Q5VWJ9 437 aa8.17□□□□□ -1.1
VPS50-203ENST00000436177 SPOPLQ6IQ16 392 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms