RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 NR4A1P22736 598 aa7.71□□□□□ -1.18
CPSF6-202ENST00000435070 DSG3P32926 999 aa7.71□□□□□ -1.18
CPSF6-202ENST00000435070 CLK2P49760 499 aaKnown RBP7.71□□□□□ -1.18
CPSF6-202ENST00000435070 EIF3EP60228 445 aaKnown RBP7.71□□□□□ -1.18
CPSF6-202ENST00000435070 ZNF543Q08ER8 600 aa7.71□□□□□ -1.18
CPSF6-202ENST00000435070 C1orf220Q5T0J3 134 aa7.71□□□□□ -1.18
CPSF6-202ENST00000435070 GPR107Q5VW38 600 aa7.71□□□□□ -1.18
CPSF6-202ENST00000435070 PPP1R18Q6NYC8 613 aa7.71□□□□□ -1.18
CPSF6-202ENST00000435070 PGM2L1Q6PCE3 622 aa7.71□□□□□ -1.18
CPSF6-202ENST00000435070 TRIM72Q6ZMU5 477 aa7.71□□□□□ -1.18
CPSF6-202ENST00000435070 C1orf186Q6ZWK4 172 aa7.71□□□□□ -1.18
CPSF6-202ENST00000435070 KRT27Q7Z3Y8 459 aa7.71□□□□□ -1.18
CPSF6-202ENST00000435070 ARHGEF1Q92888 912 aaKnown RBP7.71□□□□□ -1.18
CPSF6-202ENST00000435070 CLIP3Q96DZ5 547 aa7.71□□□□□ -1.18
CPSF6-202ENST00000435070 PLLPQ9Y342 182 aa7.71□□□□□ -1.18
CPSF6-202ENST00000435070 NEMP1O14524 444 aa7.71□□□□□ -1.18
CPSF6-202ENST00000435070 PERM1Q5SV97 790 aa7.71□□□□□ -1.18
CPSF6-202ENST00000435070 BHLHE22Q8NFJ8 381 aaPredicted RBP7.71□□□□□ -1.18
CPSF6-202ENST00000435070 HSPBP1Q9NZL4 362 aa7.71□□□□□ -1.18
CPSF6-202ENST00000435070 ARHGAP26Q9UNA1 814 aa7.71□□□□□ -1.18
CPSF6-202ENST00000435070 RNF11Q9Y3C5 154 aa7.71□□□□□ -1.18
CPSF6-202ENST00000435070 C1orf232A0A0U1RR37 186 aa7.71□□□□□ -1.18
CPSF6-202ENST00000435070 ARHGEF35A5YM69 484 aa7.71□□□□□ -1.18
CPSF6-202ENST00000435070 ERVV-1B6SEH8 477 aa7.71□□□□□ -1.18
CPSF6-202ENST00000435070 EIF3DO15371 548 aaKnown RBP eCLIP7.71□□□□□ -1.18
CPSF6-202ENST00000435070 GRIN3BO60391 1043 aa7.71□□□□□ -1.18
CPSF6-202ENST00000435070 AOC1P19801 751 aa7.71□□□□□ -1.18
CPSF6-202ENST00000435070 PPARGP37231 505 aaPredicted RBP7.71□□□□□ -1.18
CPSF6-202ENST00000435070 ESRRGP62508 458 aa7.71□□□□□ -1.18
CPSF6-202ENST00000435070 GPR141Q7Z602 305 aa7.71□□□□□ -1.18
CPSF6-202ENST00000435070 PPIL6Q8IXY8 311 aa7.71□□□□□ -1.18
CPSF6-202ENST00000435070 XXYLT1Q8NBI6 393 aa7.71□□□□□ -1.18
CPSF6-202ENST00000435070 DCPSQ96C86 337 aaKnown RBP7.71□□□□□ -1.18
CPSF6-202ENST00000435070 C7orf26Q96N11 449 aa7.71□□□□□ -1.18
CPSF6-202ENST00000435070 KLHL25Q9H0H3 589 aa7.71□□□□□ -1.18
CPSF6-202ENST00000435070 MYH14Q7Z406 1995 aaKnown RBP7.71□□□□□ -1.18
CPSF6-202ENST00000435070 CACNA1SQ13698 1873 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 IPO5O00410 1097 aaKnown RBP7.7□□□□□ -1.18
CPSF6-202ENST00000435070 KLHL2O95198 593 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 ALDH2P05091 517 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 ADRB2P07550 413 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 CYP3A4P08684 503 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 CCDC130P13994 396 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 CD247P20963 164 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 THOP1P52888 689 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 APOFQ13790 326 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 PPP2R5DQ14738 602 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 ZNF423Q2M1K9 1284 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 FASTKD1Q53R41 847 aaKnown RBP7.7□□□□□ -1.18
CPSF6-202ENST00000435070 TATDN1Q6P1N9 297 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 ZNF786Q8N393 782 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 EXD1Q8NHP7 514 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.7□□□□□ -1.18
CPSF6-202ENST00000435070 KCNK16Q96T55 309 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 C1orf21Q9H246 121 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 RAB26Q9ULW5 256 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 ADAMTS7Q9UKP4 1686 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 ZNF536O15090 1300 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 PLOD2O00469 737 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 BIRC5O15392 142 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 KRT37O76014 449 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 NTSR2O95665 410 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 HMOX2P30519 316 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 PCYT1AP49585 367 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 MRPS5P82675 430 aaKnown RBP7.7□□□□□ -1.18
CPSF6-202ENST00000435070 ADGRE1Q14246 886 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 TCEAL1Q15170 157 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 FGD3Q5JSP0 725 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 LIN9Q5TKA1 542 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 DCUN1D2Q6PH85 259 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 UNC45BQ8IWX7 931 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 EIF2AQ9BY44 585 aaKnown RBP7.7□□□□□ -1.18
CPSF6-202ENST00000435070 GCOM2Q9BZD3 368 aaPredicted RBP7.7□□□□□ -1.18
CPSF6-202ENST00000435070 POLIQ9UNA4 740 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 TESPA1A2RU30 521 aaPredicted RBP7.7□□□□□ -1.18
CPSF6-202ENST00000435070 CST8O60676 142 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 ATE1O95260 518 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 MX2P20592 715 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 RPS8P62241 208 aaKnown RBP7.7□□□□□ -1.18
CPSF6-202ENST00000435070 NR1D2Q14995 579 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 PPM1LQ5SGD2 360 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 PIWIL2Q8TC59 973 aaKnown RBP7.7□□□□□ -1.18
CPSF6-202ENST00000435070 SLC44A1Q8WWI5 657 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 SLITRK1Q96PX8 696 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 F5H423 210 aaPredicted RBP7.7□□□□□ -1.18
CPSF6-202ENST00000435070 SNRPAP09012 282 aaKnown RBP7.7□□□□□ -1.18
CPSF6-202ENST00000435070 ZNF23P17027 643 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 FAM91A1Q658Y4 838 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 SPOPLQ6IQ16 392 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 C16orf86Q6ZW13 317 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 SCAIQ8N9R8 606 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 DDX1Q92499 740 aaKnown RBP7.7□□□□□ -1.18
CPSF6-202ENST00000435070 HPS1Q92902 700 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 CMTM5Q96DZ9 223 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 MOCOSQ96EN8 888 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 ZNF778Q96MU6 729 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 FIZ1Q96SL8 496 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 TRPV6Q9H1D0 765 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 DCCP43146 1447 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 CNTNAP2Q9UHC6 1331 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms