RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 SPDYAQ5MJ70 313 aa19.3■□□□□ 0.68
CLK1-205ENST00000434813 WLSQ5T9L3 541 aa19.3■□□□□ 0.68
CLK1-205ENST00000434813 FYB2Q5VWT5 728 aa19.3■□□□□ 0.68
CLK1-205ENST00000434813 MCUQ8NE86 351 aa19.3■□□□□ 0.68
CLK1-205ENST00000434813 THOC1Q96FV9 657 aaKnown RBP19.3■□□□□ 0.68
CLK1-205ENST00000434813 HES2Q9Y543 173 aa19.3■□□□□ 0.68
CLK1-205ENST00000434813 GOLGA8RI6L899 631 aa19.29■□□□□ 0.68
CLK1-205ENST00000434813 HGSO14964 777 aaPredicted RBP19.29■□□□□ 0.68
CLK1-205ENST00000434813 AVILO75366 819 aa19.29■□□□□ 0.68
CLK1-205ENST00000434813 KRT16P08779 473 aa19.29■□□□□ 0.68
CLK1-205ENST00000434813 DHRS4L1P0CG22 281 aa19.29■□□□□ 0.68
CLK1-205ENST00000434813 DARSP14868 501 aaKnown RBP19.29■□□□□ 0.68
CLK1-205ENST00000434813 PPP6R3Q5H9R7 873 aaPredicted RBP19.29■□□□□ 0.68
CLK1-205ENST00000434813 SYCP2LQ5T4T6 812 aa19.29■□□□□ 0.68
CLK1-205ENST00000434813 IQSEC1Q6DN90 963 aa19.29■□□□□ 0.68
CLK1-205ENST00000434813 SH2D5Q6ZV89 423 aa19.29■□□□□ 0.68
CLK1-205ENST00000434813 CAND1Q86VP6 1230 aaKnown RBP19.29■□□□□ 0.68
CLK1-205ENST00000434813 CHSY1Q86X52 802 aa19.29■□□□□ 0.68
CLK1-205ENST00000434813 KIF2BQ8N4N8 673 aa19.29■□□□□ 0.68
CLK1-205ENST00000434813 ANKRD52Q8NB46 1076 aa19.29■□□□□ 0.68
CLK1-205ENST00000434813 NPLOC4Q8TAT6 608 aa19.29■□□□□ 0.68
CLK1-205ENST00000434813 KBTBD7Q8WVZ9 684 aa19.29■□□□□ 0.68
CLK1-205ENST00000434813 LRRC39Q96DD0 335 aa19.29■□□□□ 0.68
CLK1-205ENST00000434813 KLF6Q99612 283 aaPredicted RBP19.29■□□□□ 0.68
CLK1-205ENST00000434813 NXF3Q9H4D5 531 aaKnown RBP19.29■□□□□ 0.68
CLK1-205ENST00000434813 GTF2IRD1Q9UHL9 959 aa19.29■□□□□ 0.68
CLK1-205ENST00000434813 GJD2Q9UKL4 321 aa19.29■□□□□ 0.68
CLK1-205ENST00000434813 ADCY6O43306 1168 aa19.29■□□□□ 0.68
CLK1-205ENST00000434813 LPXNO60711 386 aa19.29■□□□□ 0.68
CLK1-205ENST00000434813 FAM155BO75949 473 aa19.29■□□□□ 0.68
CLK1-205ENST00000434813 ZFXP17010 805 aaPredicted RBP19.29■□□□□ 0.68
CLK1-205ENST00000434813 TFE3P19532 575 aaPredicted RBP19.29■□□□□ 0.68
CLK1-205ENST00000434813 L1CAMP32004 1257 aa19.29■□□□□ 0.68
CLK1-205ENST00000434813 INHBEP58166 350 aa19.29■□□□□ 0.68
CLK1-205ENST00000434813 FAAP100Q0VG06 881 aa19.29■□□□□ 0.68
CLK1-205ENST00000434813 SLC45A4Q5BKX6 768 aa19.29■□□□□ 0.68
CLK1-205ENST00000434813 FBXO47Q5MNV8 452 aa19.29■□□□□ 0.68
CLK1-205ENST00000434813 SLC26A11Q86WA9 606 aa19.29■□□□□ 0.68
CLK1-205ENST00000434813 CRYBG2Q8N1P7 616 aa19.29■□□□□ 0.68
CLK1-205ENST00000434813 CFAP36Q96G28 342 aa19.29■□□□□ 0.68
CLK1-205ENST00000434813 SERAC1Q96JX3 654 aa19.29■□□□□ 0.68
CLK1-205ENST00000434813 OSMRQ99650 979 aa19.29■□□□□ 0.68
CLK1-205ENST00000434813 CDHR5Q9HBB8 845 aa19.29■□□□□ 0.68
CLK1-205ENST00000434813 ZNF180Q9UJW8 692 aa19.29■□□□□ 0.68
CLK1-205ENST00000434813 NRCAMQ92823 1304 aa19.28■□□□□ 0.68
CLK1-205ENST00000434813 ZNF236Q9UL36 1845 aa19.28■□□□□ 0.68
CLK1-205ENST00000434813 TRPM7Q96QT4 1865 aa19.28■□□□□ 0.68
CLK1-205ENST00000434813 SMIM35A0A1B0GVV1 85 aa19.28■□□□□ 0.68
CLK1-205ENST00000434813 MBLAC1A4D2B0 266 aaPredicted RBP19.28■□□□□ 0.68
CLK1-205ENST00000434813 A6NJR5 290 aa19.28■□□□□ 0.68
CLK1-205ENST00000434813 PIRO00625 290 aa19.28■□□□□ 0.68
CLK1-205ENST00000434813 C2CD2LO14523 706 aa19.28■□□□□ 0.68
CLK1-205ENST00000434813 F2P00734 622 aa19.28■□□□□ 0.68
CLK1-205ENST00000434813 APRTP07741 180 aa19.28■□□□□ 0.68
CLK1-205ENST00000434813 SMIM10L2AP0DMW4 78 aa19.28■□□□□ 0.68
CLK1-205ENST00000434813 SMIM10L2BP0DMW5 78 aa19.28■□□□□ 0.68
CLK1-205ENST00000434813 CCDC130P13994 396 aa19.28■□□□□ 0.68
CLK1-205ENST00000434813 ETV4P43268 484 aa19.28■□□□□ 0.68
CLK1-205ENST00000434813 MAGEA3P43357 314 aa19.28■□□□□ 0.68
CLK1-205ENST00000434813 FAXCQ5TGI0 409 aa19.28■□□□□ 0.68
CLK1-205ENST00000434813 CCDC110Q8TBZ0 833 aa19.28■□□□□ 0.68
CLK1-205ENST00000434813 ZNF560Q96MR9 790 aa19.28■□□□□ 0.68
CLK1-205ENST00000434813 LRMDAQ9H2I8 198 aa19.28■□□□□ 0.68
CLK1-205ENST00000434813 ETNK1Q9HBU6 452 aa19.28■□□□□ 0.68
CLK1-205ENST00000434813 ZC3H7BQ9UGR2 993 aaKnown RBP19.28■□□□□ 0.68
CLK1-205ENST00000434813 AP4E1Q9UPM8 1137 aa19.28■□□□□ 0.68
CLK1-205ENST00000434813 TRIM33Q9UPN9 1127 aa19.28■□□□□ 0.68
CLK1-205ENST00000434813 HCRTO43612 131 aa19.27■□□□□ 0.68
CLK1-205ENST00000434813 GCATO75600 419 aa19.27■□□□□ 0.68
CLK1-205ENST00000434813 MAP3K6O95382 1288 aa19.27■□□□□ 0.68
CLK1-205ENST00000434813 CD4P01730 458 aa19.27■□□□□ 0.68
CLK1-205ENST00000434813 GSTA2P09210 222 aa19.27■□□□□ 0.68
CLK1-205ENST00000434813 TROVE2P10155 538 aaKnown RBP eCLIP19.27■□□□□ 0.68
CLK1-205ENST00000434813 PRKCHP24723 683 aa19.27■□□□□ 0.68
CLK1-205ENST00000434813 AXLP30530 894 aa19.27■□□□□ 0.68
CLK1-205ENST00000434813 ACADSBP45954 432 aa19.27■□□□□ 0.68
CLK1-205ENST00000434813 NR2C2P49116 596 aa19.27■□□□□ 0.68
CLK1-205ENST00000434813 MAP2K5Q13163 448 aa19.27■□□□□ 0.68
CLK1-205ENST00000434813 PRPF39Q86UA1 669 aaKnown RBP19.27■□□□□ 0.68
CLK1-205ENST00000434813 VPS52Q8N1B4 723 aa19.27■□□□□ 0.68
CLK1-205ENST00000434813 CLEC4CQ8WTT0 213 aa19.27■□□□□ 0.68
CLK1-205ENST00000434813 QKIQ96PU8 341 aaKnown RBP eCLIP19.27■□□□□ 0.68
CLK1-205ENST00000434813 LPIN3Q9BQK8 851 aa19.27■□□□□ 0.68
CLK1-205ENST00000434813 TRIM6Q9C030 488 aaPredicted RBP19.27■□□□□ 0.68
CLK1-205ENST00000434813 MANSC1Q9H8J5 431 aa19.27■□□□□ 0.68
CLK1-205ENST00000434813 PLAC1Q9HBJ0 212 aa19.27■□□□□ 0.68
CLK1-205ENST00000434813 MTMR10Q9NXD2 777 aa19.27■□□□□ 0.68
CLK1-205ENST00000434813 GDAP2Q9NXN4 497 aa19.27■□□□□ 0.68
CLK1-205ENST00000434813 TRDMT1O14717 391 aaKnown RBP19.27■□□□□ 0.67
CLK1-205ENST00000434813 CAPN15O75808 1086 aa19.27■□□□□ 0.67
CLK1-205ENST00000434813 TPSB2P20231 275 aa19.27■□□□□ 0.67
CLK1-205ENST00000434813 ADORA2BP29275 332 aa19.27■□□□□ 0.67
CLK1-205ENST00000434813 TPSAB1Q15661 275 aa19.27■□□□□ 0.67
CLK1-205ENST00000434813 TTC39BQ5VTQ0 682 aaPredicted RBP19.27■□□□□ 0.67
CLK1-205ENST00000434813 LRRC6Q86X45 466 aa19.27■□□□□ 0.67
CLK1-205ENST00000434813 IFNL1Q8IU54 200 aa19.27■□□□□ 0.67
CLK1-205ENST00000434813 C7orf31Q8N865 590 aa19.27■□□□□ 0.67
CLK1-205ENST00000434813 C12orf65Q9H3J6 166 aaKnown RBP19.27■□□□□ 0.67
CLK1-205ENST00000434813 DHX35Q9H5Z1 703 aaKnown RBP19.27■□□□□ 0.67
CLK1-205ENST00000434813 WDR91A4D1P6 747 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms