RNA–Protein interactions for RNA: ENST00000434424.5

PTPRK-212, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 555 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-212ENST00000434424 RPRD2Q5VT52 1461 aaKnown RBP8.06□□□□□ -1.12
PTPRK-212ENST00000434424 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.06□□□□□ -1.12
PTPRK-212ENST00000434424 PMS2P1A4D2B8 440 aa8.06□□□□□ -1.12
PTPRK-212ENST00000434424 FAM90A18PA6NE21 464 aa8.06□□□□□ -1.12
PTPRK-212ENST00000434424 FAM90A16PA6NEW6 464 aa8.06□□□□□ -1.12
PTPRK-212ENST00000434424 FAM90A9PA6NNJ1 464 aa8.06□□□□□ -1.12
PTPRK-212ENST00000434424 FAM90A5PA8MXJ8 464 aa8.06□□□□□ -1.12
PTPRK-212ENST00000434424 STC2O76061 302 aa8.06□□□□□ -1.12
PTPRK-212ENST00000434424 ITGB1P05556 798 aa8.06□□□□□ -1.12
PTPRK-212ENST00000434424 FAM90A15PP0C7V4 464 aa8.06□□□□□ -1.12
PTPRK-212ENST00000434424 FAM90A14PP0C7W9 464 aa8.06□□□□□ -1.12
PTPRK-212ENST00000434424 MAN2A2P49641 1150 aa8.06□□□□□ -1.12
PTPRK-212ENST00000434424 MCM2P49736 904 aa8.06□□□□□ -1.12
PTPRK-212ENST00000434424 LILRA4P59901 499 aa8.06□□□□□ -1.12
PTPRK-212ENST00000434424 RIN1Q13671 783 aa8.06□□□□□ -1.12
PTPRK-212ENST00000434424 SMAD1Q15797 465 aaKnown RBP8.06□□□□□ -1.12
PTPRK-212ENST00000434424 FAM133BQ5BKY9 247 aaKnown RBP8.06□□□□□ -1.12
PTPRK-212ENST00000434424 EFCAB12Q6NXP0 572 aa8.06□□□□□ -1.12
PTPRK-212ENST00000434424 RALYLQ86SE5 291 aaKnown RBP8.06□□□□□ -1.12
PTPRK-212ENST00000434424 GGNQ86UU5 652 aa8.06□□□□□ -1.12
PTPRK-212ENST00000434424 CFAP52Q8N1V2 620 aa8.06□□□□□ -1.12
PTPRK-212ENST00000434424 USP38Q8NB14 1042 aa8.06□□□□□ -1.12
PTPRK-212ENST00000434424 ZMIZ2Q8NF64 920 aa8.06□□□□□ -1.12
PTPRK-212ENST00000434424 ABHD5Q8WTS1 349 aa8.06□□□□□ -1.12
PTPRK-212ENST00000434424 ZNF668Q96K58 619 aaPredicted RBP8.06□□□□□ -1.12
PTPRK-212ENST00000434424 NTMQ9P121 344 aa8.06□□□□□ -1.12
PTPRK-212ENST00000434424 GPR34Q9UPC5 381 aa8.06□□□□□ -1.12
PTPRK-212ENST00000434424 RAD54BQ9Y620 910 aa8.06□□□□□ -1.12
PTPRK-212ENST00000434424 XIRP1Q702N8 1843 aaKnown RBP8.06□□□□□ -1.12
PTPRK-212ENST00000434424 ZFYVE9O95405 1425 aa8.05□□□□□ -1.12
PTPRK-212ENST00000434424 LMTK2Q8IWU2 1503 aa8.05□□□□□ -1.12
PTPRK-212ENST00000434424 A0A0U1RQG5 324 aaPredicted RBP8.05□□□□□ -1.12
PTPRK-212ENST00000434424 PRR5-ARHGAP8B1AHC4 643 aa8.05□□□□□ -1.12
PTPRK-212ENST00000434424 ZSCAN9O15535 394 aaPredicted RBP8.05□□□□□ -1.12
PTPRK-212ENST00000434424 TSPAN3O60637 253 aa8.05□□□□□ -1.12
PTPRK-212ENST00000434424 SRGAP2O75044 1071 aa8.05□□□□□ -1.12
PTPRK-212ENST00000434424 TFRCP02786 760 aaKnown RBP8.05□□□□□ -1.12
PTPRK-212ENST00000434424 SERPINA4P29622 427 aa8.05□□□□□ -1.12
PTPRK-212ENST00000434424 COPB2P35606 906 aa8.05□□□□□ -1.12
PTPRK-212ENST00000434424 DGKEP52429 567 aa8.05□□□□□ -1.12
PTPRK-212ENST00000434424 RBM5P52756 815 aaKnown RBP eCLIP8.05□□□□□ -1.12
PTPRK-212ENST00000434424 PRKAG1P54619 331 aa8.05□□□□□ -1.12
PTPRK-212ENST00000434424 DRG2P55039 364 aaKnown RBP8.05□□□□□ -1.12
PTPRK-212ENST00000434424 MEA1Q16626 185 aa8.05□□□□□ -1.12
PTPRK-212ENST00000434424 TSTQ16762 297 aaKnown RBP8.05□□□□□ -1.12
PTPRK-212ENST00000434424 TSHZ3Q63HK5 1081 aa8.05□□□□□ -1.12
PTPRK-212ENST00000434424 FAM205BPQ63HN1 556 aa8.05□□□□□ -1.12
PTPRK-212ENST00000434424 ABLIM2Q6H8Q1 611 aa8.05□□□□□ -1.12
PTPRK-212ENST00000434424 DBX2Q6ZNG2 339 aa8.05□□□□□ -1.12
PTPRK-212ENST00000434424 DOK3Q7L591 496 aa8.05□□□□□ -1.12
PTPRK-212ENST00000434424 SYT13Q7L8C5 426 aa8.05□□□□□ -1.12
PTPRK-212ENST00000434424 PRRT2Q7Z6L0 340 aaPredicted RBP8.05□□□□□ -1.12
PTPRK-212ENST00000434424 DEFB132Q7Z7B7 95 aa8.05□□□□□ -1.12
PTPRK-212ENST00000434424 FAM83AQ86UY5 434 aa8.05□□□□□ -1.12
PTPRK-212ENST00000434424 SP8Q8IXZ3 490 aa8.05□□□□□ -1.12
PTPRK-212ENST00000434424 TP53I13Q8NBR0 393 aaPredicted RBP8.05□□□□□ -1.12
PTPRK-212ENST00000434424 PPP2R3CQ969Q6 453 aa8.05□□□□□ -1.12
PTPRK-212ENST00000434424 TRIB1Q96RU8 372 aa8.05□□□□□ -1.12
PTPRK-212ENST00000434424 TLR10Q9BXR5 811 aa8.05□□□□□ -1.12
PTPRK-212ENST00000434424 ZCWPW1Q9H0M4 648 aa8.05□□□□□ -1.12
PTPRK-212ENST00000434424 LMAN2LQ9H0V9 348 aa8.05□□□□□ -1.12
PTPRK-212ENST00000434424 KRT84Q9NSB2 600 aa8.05□□□□□ -1.12
PTPRK-212ENST00000434424 DNAJB11Q9UBS4 358 aa8.05□□□□□ -1.12
PTPRK-212ENST00000434424 CNTN6Q9UQ52 1028 aa8.05□□□□□ -1.12
PTPRK-212ENST00000434424 CDYLQ9Y232 598 aa8.05□□□□□ -1.12
PTPRK-212ENST00000434424 ATRNO75882 1429 aa8.04□□□□□ -1.12
PTPRK-212ENST00000434424 MST1RQ04912 1400 aa8.04□□□□□ -1.12
PTPRK-212ENST00000434424 A0A1W2PRX2 142 aa8.04□□□□□ -1.12
PTPRK-212ENST00000434424 TIPRLO75663 272 aa8.04□□□□□ -1.12
PTPRK-212ENST00000434424 TMEM63AO94886 807 aa8.04□□□□□ -1.12
PTPRK-212ENST00000434424 MYCLP12524 364 aaPredicted RBP8.04□□□□□ -1.12
PTPRK-212ENST00000434424 CHRM3P20309 590 aa8.04□□□□□ -1.12
PTPRK-212ENST00000434424 CHMP24386 653 aa8.04□□□□□ -1.12
PTPRK-212ENST00000434424 PXNP49023 591 aaPredicted RBP8.04□□□□□ -1.12
PTPRK-212ENST00000434424 TOB1P50616 345 aaPredicted RBP8.04□□□□□ -1.12
PTPRK-212ENST00000434424 LOXL3P58215 753 aa8.04□□□□□ -1.12
PTPRK-212ENST00000434424 RNF151Q2KHN1 245 aa8.04□□□□□ -1.12
PTPRK-212ENST00000434424 ZIK1Q3SY52 487 aaPredicted RBP8.04□□□□□ -1.12
PTPRK-212ENST00000434424 CTXN3Q4LDR2 81 aa8.04□□□□□ -1.12
PTPRK-212ENST00000434424 NOMO2Q5JPE7 1267 aa8.04□□□□□ -1.12
PTPRK-212ENST00000434424 MCTP2Q6DN12 878 aa8.04□□□□□ -1.12
PTPRK-212ENST00000434424 SLC30A10Q6XR72 485 aa8.04□□□□□ -1.12
PTPRK-212ENST00000434424 MED25Q71SY5 747 aa8.04□□□□□ -1.12
PTPRK-212ENST00000434424 KRT77Q7Z794 578 aa8.04□□□□□ -1.12
PTPRK-212ENST00000434424 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.04□□□□□ -1.12
PTPRK-212ENST00000434424 GALNT5Q7Z7M9 940 aa8.04□□□□□ -1.12
PTPRK-212ENST00000434424 SPARTQ8N0X7 666 aa8.04□□□□□ -1.12
PTPRK-212ENST00000434424 RNF169Q8NCN4 708 aa8.04□□□□□ -1.12
PTPRK-212ENST00000434424 PSD4Q8NDX1 1056 aa8.04□□□□□ -1.12
PTPRK-212ENST00000434424 SHCBP1Q8NEM2 672 aa8.04□□□□□ -1.12
PTPRK-212ENST00000434424 TTPALQ9BTX7 342 aa8.04□□□□□ -1.12
PTPRK-212ENST00000434424 ACAD9Q9H845 621 aa8.04□□□□□ -1.12
PTPRK-212ENST00000434424 UNKLQ9H9P5 680 aaKnown RBP8.04□□□□□ -1.12
PTPRK-212ENST00000434424 SPON1Q9HCB6 807 aa8.04□□□□□ -1.12
PTPRK-212ENST00000434424 ANKEF1Q9NU02 776 aa8.04□□□□□ -1.12
PTPRK-212ENST00000434424 NKIRAS2Q9NYR9 191 aa8.04□□□□□ -1.12
PTPRK-212ENST00000434424 NFU1Q9UMS0 254 aa8.04□□□□□ -1.12
PTPRK-212ENST00000434424 CLCA2Q9UQC9 943 aa8.04□□□□□ -1.12
PTPRK-212ENST00000434424 DNAJC16Q9Y2G8 782 aa8.04□□□□□ -1.12
PTPRK-212ENST00000434424 CYP46A1Q9Y6A2 500 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms