RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 CNTFP26441 200 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 SERPINA4P29622 427 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 LIFRP42702 1097 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 DGKQP52824 942 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 EIF4A1P60842 406 aaKnown RBP3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 GUCY1B3Q02153 619 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 SF3A3Q12874 501 aaKnown RBP eCLIP3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 DDX10Q13206 875 aaKnown RBP3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 DNASE1L3Q13609 305 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 TAF12Q16514 161 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 ST3GAL2Q16842 350 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 TXNRD1Q16881 649 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 FAM187BQ17R55 369 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 AAK1Q2M2I8 961 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 USP39Q53GS9 565 aaKnown RBP3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 ABHD17BQ5VST6 288 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 CCDC144NLQ6NUI1 221 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 C1orf122Q6ZSJ8 110 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 USP51Q70EK9 711 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 RRAGAQ7L523 313 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 MRGPREQ86SM8 312 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 CAND1Q86VP6 1230 aaKnown RBP3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 RAB11FIP4Q86YS3 637 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 C1orf210Q8IVY1 113 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 ESX1Q8N693 406 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 C11orf44Q8N8P7 122 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 USP38Q8NB14 1042 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 B3GALNT2Q8NCR0 500 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 PPHLN1Q8NEY8 458 aaKnown RBP3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 CSGALNACT1Q8TDX6 532 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 AFG1LQ8WV93 481 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 NPIPB3Q92617 1050 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 HTRA1Q92743 480 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 DVL3Q92997 716 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 FKBP10Q96AY3 582 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 SKA1Q96BD8 255 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 KTI12Q96EK9 354 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 KAZALD1Q96I82 304 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 PBKQ96KB5 322 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 C8orf49Q96NF6 230 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 PRR25Q96S07 402 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 AGXT2Q9BYV1 514 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 TAF1DQ9H5J8 278 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 ELAC1Q9H777 363 aaKnown RBP3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 SEPSECSQ9HD40 501 aaKnown RBP3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 SYBUQ9NX95 663 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 SEMA5BQ9P283 1151 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 IFT80Q9P2H3 777 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 DKK3Q9UBP4 350 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 NKX1-2Q9UD57 310 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 CECR2Q9BXF3 1484 aa3.6□□□□□ -1.83
HMGB1P27-201ENST00000431429 B4E171 279 aa3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 KIF28PB7ZC32 967 aa3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 E7EVH7 732 aa3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 C1QTNF3-AMACRE9PGA6 284 aa3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 NKX2-8O15522 239 aa3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 EPB41L2O43491 1005 aaKnown RBP3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 HEXIM1O94992 359 aaKnown RBP3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 TMEM225BP0DP42 221 aa3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 ZNF20P17024 532 aa3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 TGM1P22735 817 aa3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 CTGFP29279 349 aa3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 AKT1P31749 480 aa3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 FOLR3P41439 243 aa3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 TSPAN7P41732 249 aa3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 AARSP49588 968 aaKnown RBP eCLIP3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 CLCN2P51788 898 aa3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 NR1H2P55055 460 aa3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 FOXL2P58012 376 aa3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 UBE3AQ05086 875 aa3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 DEUP1Q05D60 604 aa3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 TBCCQ15814 346 aa3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 NBPF8Q3BBV2 869 aa3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 SPDYAQ5MJ70 313 aa3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 HYIQ5T013 277 aa3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 TREML2Q5T2D2 321 aa3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 FNDC7Q5VTL7 733 aa3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 C16orf89Q6UX73 402 aa3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 SYNE4Q8N205 404 aa3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 FSTL5Q8N475 847 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 LINC01465Q8N7H1 131 aa3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 RP9Q8TA86 221 aaKnown RBP3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 LINC00476Q8WZB0 136 aa3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 CPT1BQ92523 772 aa3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 RUBCNQ92622 972 aa3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 PTCD3Q96EY7 689 aaKnown RBP3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 ZNF503Q96F45 646 aa3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 COG8Q96MW5 612 aa3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 CDK5RAP1Q96SZ6 601 aaKnown RBP3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 SEC62Q99442 399 aaKnown RBP3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 KRTAP4-12Q9BQ66 201 aa3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 REEP2Q9BRK0 252 aa3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 TBCCD1Q9NVR7 557 aa3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 SMPD4Q9NXE4 827 aa3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 GAR1Q9NY12 217 aaKnown RBP3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 MAP3K20Q9NYL2 800 aaKnown RBP3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 EHD3Q9NZN3 535 aa3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 DNAJC16Q9Y2G8 782 aa3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 DERAQ9Y315 318 aa3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 UBE2J1Q9Y385 318 aaPredicted RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms