RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 COL23A1Q86Y22 540 aaPredicted RBP5.59□□□□□ -1.51
PTPN4-204ENST00000431283 ZDHHC17Q8IUH5 632 aa5.59□□□□□ -1.51
PTPN4-204ENST00000431283 LINC01465Q8N7H1 131 aa5.59□□□□□ -1.51
PTPN4-204ENST00000431283 C12orf76Q8N812 135 aaPredicted RBP5.59□□□□□ -1.51
PTPN4-204ENST00000431283 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.59□□□□□ -1.51
PTPN4-204ENST00000431283 STAG1Q8WVM7 1258 aa5.59□□□□□ -1.51
PTPN4-204ENST00000431283 CTHRC1Q96CG8 243 aa5.59□□□□□ -1.51
PTPN4-204ENST00000431283 NMD3Q96D46 503 aaKnown RBP5.59□□□□□ -1.51
PTPN4-204ENST00000431283 C22orf23Q9BZE7 217 aa5.59□□□□□ -1.51
PTPN4-204ENST00000431283 LRRC27Q9C0I9 530 aa5.59□□□□□ -1.51
PTPN4-204ENST00000431283 TMEM184CQ9NVA4 438 aa5.59□□□□□ -1.51
PTPN4-204ENST00000431283 STK32BQ9NY57 414 aa5.59□□□□□ -1.51
PTPN4-204ENST00000431283 NOB1Q9ULX3 412 aaKnown RBP5.59□□□□□ -1.51
PTPN4-204ENST00000431283 SQORQ9Y6N5 450 aa5.59□□□□□ -1.51
PTPN4-204ENST00000431283 TSPOAP1O95153 1857 aa5.59□□□□□ -1.51
PTPN4-204ENST00000431283 KDM5BQ9UGL1 1544 aa5.58□□□□□ -1.52
PTPN4-204ENST00000431283 A8MVJ9 347 aa5.58□□□□□ -1.52
PTPN4-204ENST00000431283 PRPF3O43395 683 aaKnown RBP5.58□□□□□ -1.52
PTPN4-204ENST00000431283 FRS3O43559 492 aa5.58□□□□□ -1.52
PTPN4-204ENST00000431283 OAZ2O95190 189 aa5.58□□□□□ -1.52
PTPN4-204ENST00000431283 CD63P08962 238 aa5.58□□□□□ -1.52
PTPN4-204ENST00000431283 PARP1P09874 1014 aaKnown RBP5.58□□□□□ -1.52
PTPN4-204ENST00000431283 HSF1Q00613 529 aa5.58□□□□□ -1.52
PTPN4-204ENST00000431283 STIM1Q13586 685 aa5.58□□□□□ -1.52
PTPN4-204ENST00000431283 TRIM71Q2Q1W2 868 aaKnown RBP5.58□□□□□ -1.52
PTPN4-204ENST00000431283 ZNF750Q32MQ0 723 aa5.58□□□□□ -1.52
PTPN4-204ENST00000431283 C3orf38Q5JPI3 329 aa5.58□□□□□ -1.52
PTPN4-204ENST00000431283 ODR4Q5SWX8 454 aa5.58□□□□□ -1.52
PTPN4-204ENST00000431283 KIAA0319LQ8IZA0 1049 aa5.58□□□□□ -1.52
PTPN4-204ENST00000431283 C11orf44Q8N8P7 122 aa5.58□□□□□ -1.52
PTPN4-204ENST00000431283 PNPLA1Q8N8W4 532 aa5.58□□□□□ -1.52
PTPN4-204ENST00000431283 FAM71DQ8N9W8 422 aa5.58□□□□□ -1.52
PTPN4-204ENST00000431283 RUNDC1Q96C34 613 aa5.58□□□□□ -1.52
PTPN4-204ENST00000431283 WDYHV1Q96HA8 205 aa5.58□□□□□ -1.52
PTPN4-204ENST00000431283 HIST1H2AAQ96QV6 131 aa5.58□□□□□ -1.52
PTPN4-204ENST00000431283 ZNF287Q9HBT7 754 aa5.58□□□□□ -1.52
PTPN4-204ENST00000431283 GAR1Q9NY12 217 aaKnown RBP5.58□□□□□ -1.52
PTPN4-204ENST00000431283 L1RE1Q9UN81 338 aa5.58□□□□□ -1.52
PTPN4-204ENST00000431283 DISP1Q96F81 1524 aa5.58□□□□□ -1.52
PTPN4-204ENST00000431283 CD109Q6YHK3 1445 aa5.57□□□□□ -1.52
PTPN4-204ENST00000431283 IGKV2D-30A0A075B6S6 120 aa5.57□□□□□ -1.52
PTPN4-204ENST00000431283 LY6G6EA0A0G2JKS1 128 aa5.57□□□□□ -1.52
PTPN4-204ENST00000431283 MGEA5O60502 916 aa5.57□□□□□ -1.52
PTPN4-204ENST00000431283 TLR2O60603 784 aa5.57□□□□□ -1.52
PTPN4-204ENST00000431283 MAP4K4O95819 1239 aaPredicted RBP5.57□□□□□ -1.52
PTPN4-204ENST00000431283 ADRA1DP25100 572 aa5.57□□□□□ -1.52
PTPN4-204ENST00000431283 CPA2P48052 419 aa5.57□□□□□ -1.52
PTPN4-204ENST00000431283 HTRA4P83105 476 aaPredicted RBP5.57□□□□□ -1.52
PTPN4-204ENST00000431283 NPY5RQ15761 445 aa5.57□□□□□ -1.52
PTPN4-204ENST00000431283 FAM110CQ1W6H9 321 aa5.57□□□□□ -1.52
PTPN4-204ENST00000431283 RUSC1-AS1Q66K80 236 aa5.57□□□□□ -1.52
PTPN4-204ENST00000431283 APOA5Q6Q788 366 aa5.57□□□□□ -1.52
PTPN4-204ENST00000431283 CLEC9AQ6UXN8 241 aa5.57□□□□□ -1.52
PTPN4-204ENST00000431283 DEF8Q6ZN54 512 aa5.57□□□□□ -1.52
PTPN4-204ENST00000431283 VCPIP1Q96JH7 1222 aa5.57□□□□□ -1.52
PTPN4-204ENST00000431283 TRMOQ9BU70 441 aa5.57□□□□□ -1.52
PTPN4-204ENST00000431283 CINPQ9BW66 212 aaPredicted RBP5.57□□□□□ -1.52
PTPN4-204ENST00000431283 ARL8BQ9NVJ2 186 aa5.57□□□□□ -1.52
PTPN4-204ENST00000431283 DNAJB11Q9UBS4 358 aa5.57□□□□□ -1.52
PTPN4-204ENST00000431283 HS3ST3B1Q9Y662 390 aa5.57□□□□□ -1.52
PTPN4-204ENST00000431283 WDR7Q9Y4E6 1490 aa5.57□□□□□ -1.52
PTPN4-204ENST00000431283 USP12O75317 370 aa5.56□□□□□ -1.52
PTPN4-204ENST00000431283 TXNP10599 105 aaKnown RBP5.56□□□□□ -1.52
PTPN4-204ENST00000431283 CTSAP10619 480 aa5.56□□□□□ -1.52
PTPN4-204ENST00000431283 CCKBRP32239 447 aa5.56□□□□□ -1.52
PTPN4-204ENST00000431283 EIF4A1P60842 406 aaKnown RBP5.56□□□□□ -1.52
PTPN4-204ENST00000431283 RPS16P62249 146 aaKnown RBP5.56□□□□□ -1.52
PTPN4-204ENST00000431283 SWSAP1Q6NVH7 229 aa5.56□□□□□ -1.52
PTPN4-204ENST00000431283 CCDC149Q6ZUS6 474 aa5.56□□□□□ -1.52
PTPN4-204ENST00000431283 P3H2Q8IVL5 708 aa5.56□□□□□ -1.52
PTPN4-204ENST00000431283 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.56□□□□□ -1.52
PTPN4-204ENST00000431283 ARFGAP1Q8N6T3 406 aa5.56□□□□□ -1.52
PTPN4-204ENST00000431283 LRTOMTQ8WZ04 291 aa5.56□□□□□ -1.52
PTPN4-204ENST00000431283 ADGRE3Q9BY15 652 aa5.56□□□□□ -1.52
PTPN4-204ENST00000431283 MID2Q9UJV3 735 aa5.56□□□□□ -1.52
PTPN4-204ENST00000431283 RIMKLBQ9ULI2 386 aa5.56□□□□□ -1.52
PTPN4-204ENST00000431283 UGGT2Q9NYU1 1516 aa5.56□□□□□ -1.52
PTPN4-204ENST00000431283 GOLGA3Q08378 1498 aa5.56□□□□□ -1.52
PTPN4-204ENST00000431283 CD8B2A6NJW9 211 aa5.55□□□□□ -1.52
PTPN4-204ENST00000431283 FYB1O15117 783 aa5.55□□□□□ -1.52
PTPN4-204ENST00000431283 TULP3O75386 442 aa5.55□□□□□ -1.52
PTPN4-204ENST00000431283 CRYABP02511 175 aaKnown RBP5.55□□□□□ -1.52
PTPN4-204ENST00000431283 RBL1P28749 1068 aa5.55□□□□□ -1.52
PTPN4-204ENST00000431283 CCKARP32238 428 aa5.55□□□□□ -1.52
PTPN4-204ENST00000431283 YPEL5P62699 121 aa5.55□□□□□ -1.52
PTPN4-204ENST00000431283 CCDC15Q0P6D6 951 aa5.55□□□□□ -1.52
PTPN4-204ENST00000431283 SLC14A1Q13336 389 aa5.55□□□□□ -1.52
PTPN4-204ENST00000431283 SEC23BQ15437 767 aa5.55□□□□□ -1.52
PTPN4-204ENST00000431283 GPR162Q16538 588 aa5.55□□□□□ -1.52
PTPN4-204ENST00000431283 KLHL22Q53GT1 634 aa5.55□□□□□ -1.52
PTPN4-204ENST00000431283 RNF220Q5VTB9 566 aa5.55□□□□□ -1.52
PTPN4-204ENST00000431283 DARS2Q6PI48 645 aaKnown RBP5.55□□□□□ -1.52
PTPN4-204ENST00000431283 FSTL5Q8N475 847 aaPredicted RBP5.55□□□□□ -1.52
PTPN4-204ENST00000431283 EDC3Q96F86 508 aaKnown RBP5.55□□□□□ -1.52
PTPN4-204ENST00000431283 BRIP1Q9BX63 1249 aa5.55□□□□□ -1.52
PTPN4-204ENST00000431283 WWOXQ9NZC7 414 aa5.55□□□□□ -1.52
PTPN4-204ENST00000431283 HEY2Q9UBP5 337 aa5.55□□□□□ -1.52
PTPN4-204ENST00000431283 CNTNAP2Q9UHC6 1331 aa5.54□□□□□ -1.52
PTPN4-204ENST00000431283 INPPL1O15357 1258 aa5.54□□□□□ -1.52
PTPN4-204ENST00000431283 PSG1P11464 419 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms