RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 IGFBP4P22692 258 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 CCT8P50990 548 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 CYP24A1Q07973 514 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 LRRC36Q1X8D7 754 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 CCDC92Q53HC0 331 aaPredicted RBP9.2□□□□□ -0.94
CTNND1-208ENST00000428599 DENND5BQ6ZUT9 1274 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 SGF29Q96ES7 293 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 MAGED4Q96JG8 741 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 TRIM51Q9BSJ1 452 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 DCDC2Q9UHG0 476 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 MSRAQ9UJ68 235 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 hCG_2014768A0A024R1R8 64 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 PLA2G6O60733 806 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 VDRP11473 427 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 CYP2A6P11509 494 aaPredicted RBP9.2□□□□□ -0.94
CTNND1-208ENST00000428599 UQCRBP14927 111 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 CHN1P15882 459 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 STIP1P31948 543 aaKnown RBP9.2□□□□□ -0.94
CTNND1-208ENST00000428599 SHMT1P34896 483 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 TALDO1P37837 337 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 CHRNB3Q05901 458 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 NFE2Q16621 373 aaPredicted RBP9.2□□□□□ -0.94
CTNND1-208ENST00000428599 MROH9Q5TGP6 573 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 SLFN11Q7Z7L1 901 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 RGL4Q8IZJ4 473 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 SPATA4Q8NEY3 305 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 C9orf72Q96LT7 481 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 MKNK1Q9BUB5 465 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 AVENQ9NQS1 362 aaPredicted RBP9.2□□□□□ -0.94
CTNND1-208ENST00000428599 RUVBL2Q9Y230 463 aaKnown RBP9.2□□□□□ -0.94
CTNND1-208ENST00000428599 CARNS1A5YM72 827 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 FAM220BPB1ANY3 271 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 PDHXO00330 501 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 FMR1Q06787 632 aaKnown RBP eCLIP9.2□□□□□ -0.941e-6■■■■□ 23.3
CTNND1-208ENST00000428599 PDK2Q15119 407 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 NAB2Q15742 525 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 TCEAL5Q5H9L2 206 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 RETSATQ6NUM9 610 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 REPS1Q96D71 796 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 CNPY3Q9BT09 278 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 ROPN1BQ9BZX4 212 aaPredicted RBP9.2□□□□□ -0.94
CTNND1-208ENST00000428599 MYLK2Q9H1R3 596 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 IGFLR1Q9H665 355 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 ROPN1Q9HAT0 212 aaPredicted RBP9.2□□□□□ -0.94
CTNND1-208ENST00000428599 DISP2A7MBM2 1401 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 SSU72P8A0A1W2PR75 194 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 KANSL1LA0AUZ9 987 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 RGS5O15539 181 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 TIMM44O43615 452 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 TRIM13O60858 407 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 GLP2RO95838 553 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 POU1F1P28069 291 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 KRR1Q13601 381 aaKnown RBP9.2□□□□□ -0.94
CTNND1-208ENST00000428599 CUL2Q13617 745 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 CYLC2Q14093 348 aaPredicted RBP9.2□□□□□ -0.94
CTNND1-208ENST00000428599 TRIP10Q15642 601 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 PPM1LQ5SGD2 360 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 FBXW10Q5XX13 1052 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 MIER2Q8N344 545 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 SCAIQ8N9R8 606 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 FAM45AQ8TCE6 357 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 ADAM21Q9UKJ8 722 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 CRYL1Q9Y2S2 319 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 SAC3D1A6NKF1 404 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 HS6ST1O60243 411 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 GLRA3O75311 464 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 OR6A2O95222 327 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 ARP10275 920 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 ALDH9A1P49189 494 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 BCAT1P54687 386 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 BTG3Q14201 252 aaPredicted RBP9.19□□□□□ -0.94
CTNND1-208ENST00000428599 E2F4Q16254 413 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 NOL9Q5SY16 702 aaKnown RBP9.19□□□□□ -0.94
CTNND1-208ENST00000428599 MPZL3Q6UWV2 235 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 PTF1AQ7RTS3 328 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 C3orf20Q8ND61 904 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 WDR36Q8NI36 951 aaKnown RBP9.19□□□□□ -0.94
CTNND1-208ENST00000428599 TMEM159Q96B96 161 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 TARS2Q9BW92 718 aaKnown RBP9.19□□□□□ -0.94
CTNND1-208ENST00000428599 CAAP1Q9H8G2 361 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 UXTQ9UBK9 157 aaPredicted RBP9.19□□□□□ -0.94
CTNND1-208ENST00000428599 TBX20Q9UMR3 447 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 USP15Q9Y4E8 981 aaPredicted RBP9.19□□□□□ -0.94
CTNND1-208ENST00000428599 SNX8Q9Y5X2 465 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 TMEM253P0C7T8 217 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 CTSEP14091 401 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 GYS2P54840 703 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 TTC33Q6PID6 262 aaPredicted RBP9.19□□□□□ -0.94
CTNND1-208ENST00000428599 SRLQ86TD4 932 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 MRPL9Q9BYD2 267 aaKnown RBP9.19□□□□□ -0.94
CTNND1-208ENST00000428599 NEK6Q9HC98 313 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 PXMP2Q9NR77 195 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 LRRC4BQ9NT99 713 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 COQ6Q9Y2Z9 468 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 ZBTB39O15060 712 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 SPTLC1O15269 473 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 PABPC1P11940 636 aaKnown RBP9.19□□□□□ -0.94
CTNND1-208ENST00000428599 COMTP21964 271 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 HOXA10P31260 410 aaPredicted RBP9.19□□□□□ -0.94
CTNND1-208ENST00000428599 SREBF1P36956 1147 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms