RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 UBDO15205 165 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 TAF6P49848 677 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 VAC14Q08AM6 782 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 S100ZQ8WXG8 99 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 BCLAF3A2AJT9 711 aaKnown RBP14.84□□□□□ -0.03
PTPN13-203ENST00000427191 TFE3P19532 575 aaPredicted RBP14.84□□□□□ -0.03
PTPN13-203ENST00000427191 SAMD3Q8N6K7 520 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 HAVCR1Q96D42 359 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 PHF20Q9BVI0 1012 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 KCTD10Q9H3F6 313 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 SYNDIG1Q9H7V2 258 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 SLC25A27O95847 323 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 PALB2Q86YC2 1186 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 C1orf131Q8NDD1 294 aaKnown RBP14.84□□□□□ -0.03
PTPN13-203ENST00000427191 OXER1Q8TDS5 423 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 REXO4Q9GZR2 422 aaKnown RBP14.84□□□□□ -0.03
PTPN13-203ENST00000427191 CNOT7Q9UIV1 285 aaKnown RBP14.84□□□□□ -0.03
PTPN13-203ENST00000427191 HOXA2O43364 376 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 MFN2O95140 757 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 TXNP10599 105 aaKnown RBP14.84□□□□□ -0.03
PTPN13-203ENST00000427191 XRCC4Q13426 336 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 ZNF57Q68EA5 555 aaPredicted RBP14.84□□□□□ -0.03
PTPN13-203ENST00000427191 IZUMO2Q6UXV1 221 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 AKAP7Q9P0M2 348 aaPredicted RBP14.84□□□□□ -0.03
PTPN13-203ENST00000427191 CEP170Q5SW79 1584 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 CASZ1Q86V15 1759 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 CYP2A7P20853 494 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 RAB25P57735 213 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 LDHDQ86WU2 507 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 HERC6Q8IVU3 1022 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 TCF7L2Q9NQB0 619 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 BTBD3Q9Y2F9 522 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 COL15A1P39059 1388 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 LOC100653049A0A140TA62 436 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 NR5A2O00482 541 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 LDLRP01130 860 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 HK2P52789 917 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 IL5RAQ01344 420 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 LAYNQ6UX15 382 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 NSMCE2Q96MF7 247 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 TMEM106CQ9BVX2 250 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 SAR1AQ9NR31 198 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 RUVBL2Q9Y230 463 aaKnown RBP14.84□□□□□ -0.03
PTPN13-203ENST00000427191 EXOSC10Q01780 885 aaKnown RBP14.84□□□□□ -0.03
PTPN13-203ENST00000427191 OTUD4Q01804 1114 aaKnown RBP14.84□□□□□ -0.03
PTPN13-203ENST00000427191 PDPK2PQ6A1A2 396 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 EXOC3L1Q86VI1 746 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 SLC25A41Q8N5S1 370 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.84□□□□□ -0.03
PTPN13-203ENST00000427191 SNRNP27Q8WVK2 155 aaKnown RBP14.84□□□□□ -0.03
PTPN13-203ENST00000427191 PIK3R5Q8WYR1 880 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 CAVIN3Q969G5 261 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 NMRK2Q9NPI5 230 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 THAP1Q9NVV9 213 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 SHOC2Q9UQ13 582 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 ACOT9Q9Y305 439 aa14.84□□□□□ -0.03
PTPN13-203ENST00000427191 ZNF521Q96K83 1311 aa14.83□□□□□ -0.03
PTPN13-203ENST00000427191 MAGI2Q86UL8 1455 aa14.83□□□□□ -0.03
PTPN13-203ENST00000427191 TDP2O95551 362 aa14.83□□□□□ -0.03
PTPN13-203ENST00000427191 PDIA6Q15084 440 aa14.83□□□□□ -0.03
PTPN13-203ENST00000427191 INO80DQ53TQ3 878 aaPredicted RBP14.83□□□□□ -0.03
PTPN13-203ENST00000427191 ADHFE1Q8IWW8 467 aa14.83□□□□□ -0.03
PTPN13-203ENST00000427191 PGS1Q32NB8 556 aa14.83□□□□□ -0.04
PTPN13-203ENST00000427191 C10orf120Q5SQS8 335 aa14.83□□□□□ -0.04
PTPN13-203ENST00000427191 IRAK1BP1Q5VVH5 260 aa14.83□□□□□ -0.04
PTPN13-203ENST00000427191 DPP7Q9UHL4 492 aa14.83□□□□□ -0.04
PTPN13-203ENST00000427191 ATP6V1HQ9UI12 483 aa14.83□□□□□ -0.04
PTPN13-203ENST00000427191 MINPP1Q9UNW1 487 aa14.83□□□□□ -0.04
PTPN13-203ENST00000427191 IFRD1O00458 451 aaPredicted RBP14.83□□□□□ -0.04
PTPN13-203ENST00000427191 HBP1O60381 514 aa14.83□□□□□ -0.04
PTPN13-203ENST00000427191 TBCELQ5QJ74 424 aa14.83□□□□□ -0.04
PTPN13-203ENST00000427191 CLYBLQ8N0X4 340 aa14.83□□□□□ -0.04
PTPN13-203ENST00000427191 FAM210AQ96ND0 272 aa14.83□□□□□ -0.04
PTPN13-203ENST00000427191 PARK7Q99497 189 aaKnown RBP14.83□□□□□ -0.04
PTPN13-203ENST00000427191 SEPT5Q99719 369 aaPredicted RBP14.83□□□□□ -0.04
PTPN13-203ENST00000427191 CHORDC1Q9UHD1 332 aaPredicted RBP14.83□□□□□ -0.04
PTPN13-203ENST00000427191 ITSN1Q15811 1721 aa14.83□□□□□ -0.04
PTPN13-203ENST00000427191 SPATA31E1Q6ZUB1 1445 aa14.83□□□□□ -0.04
PTPN13-203ENST00000427191 GLP2RO95838 553 aa14.83□□□□□ -0.04
PTPN13-203ENST00000427191 HLA-DRAP01903 254 aa14.83□□□□□ -0.04
PTPN13-203ENST00000427191 ARHGDIBP52566 201 aa14.83□□□□□ -0.04
PTPN13-203ENST00000427191 CUL2Q13617 745 aa14.83□□□□□ -0.04
PTPN13-203ENST00000427191 FNIP1Q8TF40 1166 aa14.83□□□□□ -0.04
PTPN13-203ENST00000427191 ATXN2LQ8WWM7 1075 aaKnown RBP14.83□□□□□ -0.04
PTPN13-203ENST00000427191 OXCT2Q9BYC2 517 aaPredicted RBP14.83□□□□□ -0.04
PTPN13-203ENST00000427191 TSPAN19P0C672 248 aa14.83□□□□□ -0.04
PTPN13-203ENST00000427191 MYBPC2Q14324 1141 aa14.83□□□□□ -0.04
PTPN13-203ENST00000427191 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.83□□□□□ -0.04
PTPN13-203ENST00000427191 GSAPA4D1B5 854 aa14.83□□□□□ -0.04
PTPN13-203ENST00000427191 OPLAHO14841 1288 aa14.83□□□□□ -0.04
PTPN13-203ENST00000427191 PSMB9P28065 219 aa14.83□□□□□ -0.04
PTPN13-203ENST00000427191 BCAT1P54687 386 aa14.83□□□□□ -0.04
PTPN13-203ENST00000427191 MYL6P60660 151 aa14.83□□□□□ -0.04
PTPN13-203ENST00000427191 SF3B3Q15393 1217 aaKnown RBP14.83□□□□□ -0.04
PTPN13-203ENST00000427191 VPS72Q15906 364 aa14.83□□□□□ -0.04
PTPN13-203ENST00000427191 DGKDQ16760 1214 aa14.83□□□□□ -0.04
PTPN13-203ENST00000427191 GRTP1Q5TC63 336 aa14.83□□□□□ -0.04
PTPN13-203ENST00000427191 C11orf63Q6NUN7 778 aa14.83□□□□□ -0.04
PTPN13-203ENST00000427191 ZNF605Q86T29 641 aa14.83□□□□□ -0.04
PTPN13-203ENST00000427191 BSNDQ8WZ55 320 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms