RNA–Protein interactions for RNA: ENST00000427183.6

HDLBP-214, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2 BASIC

Gene HDLBP, Length 6,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-214ENST00000427183 TRAF3Q13114 568 aa12.9□□□□□ -0.34
HDLBP-214ENST00000427183 BMPR2Q13873 1038 aa12.9□□□□□ -0.34
HDLBP-214ENST00000427183 FGD3Q5JSP0 725 aa12.9□□□□□ -0.34
HDLBP-214ENST00000427183 KDM7AQ6ZMT4 941 aa12.9□□□□□ -0.34
HDLBP-214ENST00000427183 PHF21BQ96EK2 531 aa12.9□□□□□ -0.34
HDLBP-214ENST00000427183 RPRD1AQ96P16 312 aaPredicted RBP12.9□□□□□ -0.34
HDLBP-214ENST00000427183 EPB41L4AQ9HCS5 686 aaPredicted RBP12.9□□□□□ -0.34
HDLBP-214ENST00000427183 COMMD8Q9NX08 183 aa12.9□□□□□ -0.34
HDLBP-214ENST00000427183 DDIT4Q9NX09 232 aa12.9□□□□□ -0.34
HDLBP-214ENST00000427183 VAV3Q9UKW4 847 aa12.9□□□□□ -0.34
HDLBP-214ENST00000427183 SLC9A8Q9Y2E8 581 aa12.9□□□□□ -0.34
HDLBP-214ENST00000427183 PCDHB2Q9Y5E7 798 aa12.9□□□□□ -0.34
HDLBP-214ENST00000427183 ERVV-1B6SEH8 477 aa12.9□□□□□ -0.34
HDLBP-214ENST00000427183 BIRC5O15392 142 aa12.9□□□□□ -0.34
HDLBP-214ENST00000427183 C6orf222P0C671 652 aaPredicted RBP12.9□□□□□ -0.34
HDLBP-214ENST00000427183 RAD23AP54725 363 aa12.9□□□□□ -0.34
HDLBP-214ENST00000427183 EMC2Q15006 297 aa12.9□□□□□ -0.34
HDLBP-214ENST00000427183 ATF7IP2Q5U623 682 aa12.9□□□□□ -0.34
HDLBP-214ENST00000427183 LRRC6Q86X45 466 aa12.9□□□□□ -0.34
HDLBP-214ENST00000427183 ANKS1AQ92625 1134 aa12.9□□□□□ -0.34
HDLBP-214ENST00000427183 MED8Q96G25 268 aa12.9□□□□□ -0.34
HDLBP-214ENST00000427183 FOXP3Q9BZS1 431 aa12.9□□□□□ -0.34
HDLBP-214ENST00000427183 OSGEPL1Q9H4B0 414 aa12.9□□□□□ -0.34
HDLBP-214ENST00000427183 MIEF1Q9NQG6 463 aa12.9□□□□□ -0.34
HDLBP-214ENST00000427183 UBP1Q9NZI7 540 aa12.9□□□□□ -0.34
HDLBP-214ENST00000427183 PPIEQ9UNP9 301 aaKnown RBP12.9□□□□□ -0.34
HDLBP-214ENST00000427183 DYRK1BQ9Y463 629 aa12.9□□□□□ -0.34
HDLBP-214ENST00000427183 GYPCP04921 128 aa12.9□□□□□ -0.35
HDLBP-214ENST00000427183 AKR1D1P51857 326 aa12.9□□□□□ -0.35
HDLBP-214ENST00000427183 RBBP4Q09028 425 aa12.9□□□□□ -0.35
HDLBP-214ENST00000427183 ITGADQ13349 1161 aa12.9□□□□□ -0.35
HDLBP-214ENST00000427183 ORC2Q13416 577 aaPredicted RBP12.9□□□□□ -0.35
HDLBP-214ENST00000427183 CYP2R1Q6VVX0 501 aa12.9□□□□□ -0.35
HDLBP-214ENST00000427183 NT5DC3Q86UY8 548 aa12.9□□□□□ -0.35
HDLBP-214ENST00000427183 FRMD6Q96NE9 622 aa12.9□□□□□ -0.35
HDLBP-214ENST00000427183 PPP1R2P1Q96PQ5 205 aa12.9□□□□□ -0.35
HDLBP-214ENST00000427183 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.89□□□□□ -0.35
HDLBP-214ENST00000427183 FAM47E-STBD1D6RA91 191 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 PSMD14O00487 310 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 PLA2G6O60733 806 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 RPS6KA5O75582 802 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 FGFR3P22607 806 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 MAPK1P28482 360 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 ACADSBP45954 432 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 ALDH1A3P47895 512 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 ABATP80404 500 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 LGALS3BPQ08380 585 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 PLCL1Q15111 1095 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 NR6A1Q15406 480 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 SV2CQ496J9 727 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 ZNF544Q6NX49 715 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 SCUBE2Q9NQ36 999 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 GSG1L2A8MUP6 293 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 SH3BGRLO75368 114 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 DGAT1O75907 488 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 ITGB3P05106 788 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 TNNI3P19429 210 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 PAX7P23759 505 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 BAATQ14032 418 aaPredicted RBP12.89□□□□□ -0.35
HDLBP-214ENST00000427183 TRAPPC11Q7Z392 1133 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 ZNF438Q7Z4V0 828 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 CDK20Q8IZL9 346 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 PIGBQ92521 554 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 PDLIM2Q96JY6 352 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 PCDHGA3Q9Y5H0 932 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.89□□□□□ -0.35
HDLBP-214ENST00000427183 FASP25445 335 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 ZNF177Q13360 481 aaPredicted RBP12.89□□□□□ -0.35
HDLBP-214ENST00000427183 DGCR6Q14129 220 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 GLRA4Q5JXX5 417 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 KIAA0408Q6ZU52 694 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 SLC13A5Q86YT5 568 aaPredicted RBP12.89□□□□□ -0.35
HDLBP-214ENST00000427183 CLEC10AQ8IUN9 316 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 ZNF671Q8TAW3 534 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 RAET1EQ8TD07 263 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 SEPT1Q8WYJ6 367 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 VPS33AQ96AX1 596 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 TMEM237Q96Q45 408 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 SLC9A7Q96T83 725 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 USP42Q9H9J4 1324 aaKnown RBP12.89□□□□□ -0.35
HDLBP-214ENST00000427183 POLD3Q15054 466 aaPredicted RBP12.89□□□□□ -0.35
HDLBP-214ENST00000427183 CDC73Q6P1J9 531 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 DNAJC14Q6Y2X3 702 aaPredicted RBP12.89□□□□□ -0.35
HDLBP-214ENST00000427183 PTAR1Q7Z6K3 402 aaPredicted RBP12.89□□□□□ -0.35
HDLBP-214ENST00000427183 MIB1Q86YT6 1006 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 CARNMT1Q8N4J0 409 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 ANKRD7Q92527 254 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 HPDLQ96IR7 371 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 HEG1Q9ULI3 1381 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 KANSL1LA0AUZ9 987 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 ASB14A6NK59 587 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 CCNT2O60583 730 aaKnown RBP12.89□□□□□ -0.35
HDLBP-214ENST00000427183 TSPAN3O60637 253 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 NUDT14O95848 222 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 TSPAN19P0C672 248 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 ERVK-10P10266 1014 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 PAICSP22234 425 aaKnown RBP12.89□□□□□ -0.35
HDLBP-214ENST00000427183 GEMP55040 296 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 ADARP55265 1226 aaKnown RBP12.89□□□□□ -0.35
HDLBP-214ENST00000427183 LPIN1Q14693 890 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms