RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 CMASQ8NFW8 434 aaPredicted RBP11.1□□□□□ -0.63
CUX1-205ENST00000425244 ITFG2Q969R8 447 aa11.1□□□□□ -0.63
CUX1-205ENST00000425244 MCRS1Q96EZ8 462 aa11.1□□□□□ -0.63
CUX1-205ENST00000425244 CFAP36Q96G28 342 aa11.1□□□□□ -0.63
CUX1-205ENST00000425244 DEFB118Q96PH6 123 aa11.1□□□□□ -0.63
CUX1-205ENST00000425244 LRRC37BQ96QE4 947 aa11.1□□□□□ -0.63
CUX1-205ENST00000425244 FRMD8P1Q9BZ68 369 aaPredicted RBP11.1□□□□□ -0.63
CUX1-205ENST00000425244 ACSS3Q9H6R3 686 aa11.1□□□□□ -0.63
CUX1-205ENST00000425244 NPHS2Q9NP85 383 aa11.1□□□□□ -0.63
CUX1-205ENST00000425244 FAM49BQ9NUQ9 324 aa11.1□□□□□ -0.63
CUX1-205ENST00000425244 KLK14Q9P0G3 267 aa11.1□□□□□ -0.63
CUX1-205ENST00000425244 STARD13Q9Y3M8 1113 aa11.1□□□□□ -0.63
CUX1-205ENST00000425244 IKBKGQ9Y6K9 419 aa11.1□□□□□ -0.63
CUX1-205ENST00000425244 SCN10AQ9Y5Y9 1956 aa11.1□□□□□ -0.63
CUX1-205ENST00000425244 A0A1B0GUA9 196 aa11.1□□□□□ -0.63
CUX1-205ENST00000425244 FGFR1P11362 822 aa11.1□□□□□ -0.63
CUX1-205ENST00000425244 TARSP26639 723 aaKnown RBP11.1□□□□□ -0.63
CUX1-205ENST00000425244 OVGP1Q12889 678 aa11.1□□□□□ -0.63
CUX1-205ENST00000425244 GOLGA7BQ2TAP0 167 aa11.1□□□□□ -0.63
CUX1-205ENST00000425244 LHX8Q68G74 356 aa11.1□□□□□ -0.63
CUX1-205ENST00000425244 ZNF449Q6P9G9 518 aa11.1□□□□□ -0.63
CUX1-205ENST00000425244 TCP10LQ8TDR4 215 aa11.1□□□□□ -0.63
CUX1-205ENST00000425244 FAF2Q96CS3 445 aa11.1□□□□□ -0.63
CUX1-205ENST00000425244 KIF12Q96FN5 646 aa11.1□□□□□ -0.63
CUX1-205ENST00000425244 TMEM237Q96Q45 408 aa11.1□□□□□ -0.63
CUX1-205ENST00000425244 CNPY3Q9BT09 278 aa11.1□□□□□ -0.63
CUX1-205ENST00000425244 NXF3Q9H4D5 531 aaKnown RBP11.1□□□□□ -0.63
CUX1-205ENST00000425244 DPP3Q9NY33 737 aa11.1□□□□□ -0.63
CUX1-205ENST00000425244 SLC17A7Q9P2U7 560 aa11.1□□□□□ -0.63
CUX1-205ENST00000425244 KCNN4O15554 427 aa11.09□□□□□ -0.63
CUX1-205ENST00000425244 EDF1O60869 148 aaKnown RBP11.09□□□□□ -0.63
CUX1-205ENST00000425244 NEFHP12036 1026 aa11.09□□□□□ -0.63
CUX1-205ENST00000425244 ATP2A2P16615 1042 aaKnown RBP11.09□□□□□ -0.63
CUX1-205ENST00000425244 TAZQ16635 292 aa11.09□□□□□ -0.63
CUX1-205ENST00000425244 FAM187BQ17R55 369 aa11.09□□□□□ -0.63
CUX1-205ENST00000425244 ZC3H12AQ5D1E8 599 aaKnown RBP11.09□□□□□ -0.63
CUX1-205ENST00000425244 TWF2Q6IBS0 349 aaKnown RBP11.09□□□□□ -0.63
CUX1-205ENST00000425244 CCSAPQ6IQ19 270 aaPredicted RBP11.09□□□□□ -0.63
CUX1-205ENST00000425244 TAF2Q6P1X5 1199 aa11.09□□□□□ -0.63
CUX1-205ENST00000425244 CCDC33Q8N5R6 958 aa11.09□□□□□ -0.63
CUX1-205ENST00000425244 ZNF75CPQ92670 426 aaPredicted RBP11.09□□□□□ -0.63
CUX1-205ENST00000425244 STAMBPL1Q96FJ0 436 aa11.09□□□□□ -0.63
CUX1-205ENST00000425244 RNF208Q9H0X6 261 aa11.09□□□□□ -0.63
CUX1-205ENST00000425244 TRPV6Q9H1D0 765 aa11.09□□□□□ -0.63
CUX1-205ENST00000425244 CYP3A43Q9HB55 503 aa11.09□□□□□ -0.63
CUX1-205ENST00000425244 RAB6BQ9NRW1 208 aa11.09□□□□□ -0.63
CUX1-205ENST00000425244 SAGE1Q9NXZ1 904 aa11.09□□□□□ -0.63
CUX1-205ENST00000425244 DCTN4Q9UJW0 460 aa11.09□□□□□ -0.63
CUX1-205ENST00000425244 BARX2Q9UMQ3 279 aaPredicted RBP11.09□□□□□ -0.63
CUX1-205ENST00000425244 CHKBQ9Y259 395 aa11.09□□□□□ -0.63
CUX1-205ENST00000425244 USH1CQ9Y6N9 552 aa11.09□□□□□ -0.63
CUX1-205ENST00000425244 KBTBD13C9JR72 458 aa11.09□□□□□ -0.63
CUX1-205ENST00000425244 MT-ND3P03897 115 aa11.09□□□□□ -0.63
CUX1-205ENST00000425244 ALDH3A1P30838 453 aa11.09□□□□□ -0.63
CUX1-205ENST00000425244 ATICP31939 592 aa11.09□□□□□ -0.63
CUX1-205ENST00000425244 PPP6R3Q5H9R7 873 aaPredicted RBP11.09□□□□□ -0.63
CUX1-205ENST00000425244 NOTUMQ6P988 496 aa11.09□□□□□ -0.63
CUX1-205ENST00000425244 OTOAQ7RTW8 1153 aa11.09□□□□□ -0.63
CUX1-205ENST00000425244 RSPH3Q86UC2 560 aa11.09□□□□□ -0.63
CUX1-205ENST00000425244 IFNLR1Q8IU57 520 aaPredicted RBP11.09□□□□□ -0.63
CUX1-205ENST00000425244 CXorf38Q8TB03 319 aa11.09□□□□□ -0.63
CUX1-205ENST00000425244 AGAP11Q8TF27 550 aa11.09□□□□□ -0.63
CUX1-205ENST00000425244 ACAP3Q96P50 834 aa11.09□□□□□ -0.63
CUX1-205ENST00000425244 NT5C1AQ9BXI3 368 aa11.09□□□□□ -0.63
CUX1-205ENST00000425244 PPCSQ9HAB8 311 aa11.09□□□□□ -0.63
CUX1-205ENST00000425244 STARD7Q9NQZ5 370 aa11.09□□□□□ -0.63
CUX1-205ENST00000425244 TXLNGQ9NUQ3 528 aa11.09□□□□□ -0.63
CUX1-205ENST00000425244 HAO1Q9UJM8 370 aa11.09□□□□□ -0.63
CUX1-205ENST00000425244 C2CD4BA6NLJ0 364 aa11.08□□□□□ -0.64
CUX1-205ENST00000425244 UNC5CO95185 931 aa11.08□□□□□ -0.64
CUX1-205ENST00000425244 ZWINTO95229 277 aa11.08□□□□□ -0.64
CUX1-205ENST00000425244 PCK1P35558 622 aa11.08□□□□□ -0.64
CUX1-205ENST00000425244 GABRB2P47870 512 aa11.08□□□□□ -0.64
CUX1-205ENST00000425244 CRYBB1P53674 252 aaPredicted RBP11.08□□□□□ -0.64
CUX1-205ENST00000425244 MRPS6P82932 125 aaKnown RBP11.08□□□□□ -0.64
CUX1-205ENST00000425244 RBP5P82980 135 aa11.08□□□□□ -0.64
CUX1-205ENST00000425244 PTK7Q13308 1070 aa11.08□□□□□ -0.64
CUX1-205ENST00000425244 KBTBD12Q3ZCT8 623 aa11.08□□□□□ -0.64
CUX1-205ENST00000425244 ACCSLQ4AC99 568 aa11.08□□□□□ -0.64
CUX1-205ENST00000425244 SLC27A1Q6PCB7 646 aa11.08□□□□□ -0.64
CUX1-205ENST00000425244 ADGRD1Q6QNK2 874 aa11.08□□□□□ -0.64
CUX1-205ENST00000425244 ACOT1Q86TX2 421 aa11.08□□□□□ -0.64
CUX1-205ENST00000425244 CTAGE3PQ8IX95 158 aa11.08□□□□□ -0.64
CUX1-205ENST00000425244 GIMAP7Q8NHV1 300 aa11.08□□□□□ -0.64
CUX1-205ENST00000425244 DCAKDQ8WVC6 231 aa11.08□□□□□ -0.64
CUX1-205ENST00000425244 CYTH2Q99418 400 aa11.08□□□□□ -0.64
CUX1-205ENST00000425244 MIS12Q9H081 205 aa11.08□□□□□ -0.64
CUX1-205ENST00000425244 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.08□□□□□ -0.644e-7■■■■■ 40.8
CUX1-205ENST00000425244 ASB7Q9H672 318 aa11.08□□□□□ -0.64
CUX1-205ENST00000425244 ARHGEF3Q9NR81 526 aa11.08□□□□□ -0.64
CUX1-205ENST00000425244 ZMYND8Q9ULU4 1186 aaPredicted RBP11.08□□□□□ -0.64
CUX1-205ENST00000425244 SNX9Q9Y5X1 595 aa11.08□□□□□ -0.64
CUX1-205ENST00000425244 THSD7BQ9C0I4 1608 aa11.08□□□□□ -0.64
CUX1-205ENST00000425244 TRIP11Q15643 1979 aa11.08□□□□□ -0.64
CUX1-205ENST00000425244 A0A1W2PQ45 241 aaPredicted RBP11.08□□□□□ -0.64
CUX1-205ENST00000425244 A0A1W2PQY0 241 aa11.08□□□□□ -0.64
CUX1-205ENST00000425244 TCRBV9S1A1TA0A576 114 aa11.08□□□□□ -0.64
CUX1-205ENST00000425244 E7ESA3 106 aa11.08□□□□□ -0.64
CUX1-205ENST00000425244 CHRNA1P02708 482 aa11.08□□□□□ -0.64
CUX1-205ENST00000425244 INHBAP08476 426 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms