RNA–Protein interactions for RNA: ENST00000424645.5

NCSTN-204, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-204ENST00000424645 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.66□□□□□ -0.7
NCSTN-204ENST00000424645 RNF38Q9H0F5 515 aa10.66□□□□□ -0.7
NCSTN-204ENST00000424645 DEF6Q9H4E7 631 aa10.66□□□□□ -0.7
NCSTN-204ENST00000424645 NMUR1Q9HB89 426 aa10.66□□□□□ -0.7
NCSTN-204ENST00000424645 MRPL47Q9HD33 250 aaKnown RBP10.66□□□□□ -0.7
NCSTN-204ENST00000424645 ARHGAP20Q9P2F6 1191 aa10.66□□□□□ -0.7
NCSTN-204ENST00000424645 TBC1D14Q9P2M4 693 aa10.66□□□□□ -0.7
NCSTN-204ENST00000424645 ADAMTS1Q9UHI8 967 aa10.66□□□□□ -0.7
NCSTN-204ENST00000424645 LCMT1Q9UIC8 334 aa10.66□□□□□ -0.7
NCSTN-204ENST00000424645 STAP1Q9ULZ2 295 aa10.66□□□□□ -0.7
NCSTN-204ENST00000424645 PAXBP1Q9Y5B6 917 aa10.66□□□□□ -0.7
NCSTN-204ENST00000424645 NOTCH4Q99466 2003 aa10.66□□□□□ -0.7
NCSTN-204ENST00000424645 BRWD1Q9NSI6 2320 aa10.66□□□□□ -0.7
NCSTN-204ENST00000424645 ANKRD62A6NC57 917 aa10.65□□□□□ -0.7
NCSTN-204ENST00000424645 SIGLEC16A6NMB1 481 aa10.65□□□□□ -0.7
NCSTN-204ENST00000424645 HEPACAM2A8MVW5 462 aa10.65□□□□□ -0.7
NCSTN-204ENST00000424645 DDX3XO00571 662 aaKnown RBP eCLIP10.65□□□□□ -0.7
NCSTN-204ENST00000424645 CHADO15335 359 aa10.65□□□□□ -0.7
NCSTN-204ENST00000424645 LATS1O95835 1130 aa10.65□□□□□ -0.7
NCSTN-204ENST00000424645 FTLP02792 175 aaPredicted RBP10.65□□□□□ -0.7
NCSTN-204ENST00000424645 SLC2A3P11169 496 aa10.65□□□□□ -0.7
NCSTN-204ENST00000424645 SKILP12757 684 aa10.65□□□□□ -0.7
NCSTN-204ENST00000424645 NCAM1P13591 858 aa10.65□□□□□ -0.7
NCSTN-204ENST00000424645 ALADP13716 330 aa10.65□□□□□ -0.7
NCSTN-204ENST00000424645 GLULP15104 373 aa10.65□□□□□ -0.7
NCSTN-204ENST00000424645 FECHP22830 423 aa10.65□□□□□ -0.7
NCSTN-204ENST00000424645 FCARP24071 287 aa10.65□□□□□ -0.7
NCSTN-204ENST00000424645 MATKP42679 507 aa10.65□□□□□ -0.7
NCSTN-204ENST00000424645 ADKP55263 362 aaKnown RBP10.65□□□□□ -0.7
NCSTN-204ENST00000424645 AMPD2Q01433 879 aa10.65□□□□□ -0.7
NCSTN-204ENST00000424645 PDGFRLQ15198 375 aa10.65□□□□□ -0.7
NCSTN-204ENST00000424645 STXBP5Q5T5C0 1151 aa10.65□□□□□ -0.7
NCSTN-204ENST00000424645 E4F1Q66K89 784 aaPredicted RBP10.65□□□□□ -0.7
NCSTN-204ENST00000424645 TANGO2Q6ICL3 276 aa10.65□□□□□ -0.7
NCSTN-204ENST00000424645 ALKBH5Q6P6C2 394 aaKnown RBP10.65□□□□□ -0.7
NCSTN-204ENST00000424645 PARM1Q6UWI2 310 aa10.65□□□□□ -0.7
NCSTN-204ENST00000424645 FAM183BPQ6ZVS7 135 aa10.65□□□□□ -0.7
NCSTN-204ENST00000424645 HTR3DQ70Z44 454 aa10.65□□□□□ -0.7
NCSTN-204ENST00000424645 MON1BQ7L1V2 547 aa10.65□□□□□ -0.7
NCSTN-204ENST00000424645 RNF135Q8IUD6 432 aa10.65□□□□□ -0.7
NCSTN-204ENST00000424645 UNC45BQ8IWX7 931 aa10.65□□□□□ -0.7
NCSTN-204ENST00000424645 YAF2Q8IY57 180 aa10.65□□□□□ -0.7
NCSTN-204ENST00000424645 MCOLN2Q8IZK6 566 aa10.65□□□□□ -0.7
NCSTN-204ENST00000424645 C3orf20Q8ND61 904 aa10.65□□□□□ -0.7
NCSTN-204ENST00000424645 DNASE1L2Q92874 299 aa10.65□□□□□ -0.7
NCSTN-204ENST00000424645 FGF14Q92915 247 aa10.65□□□□□ -0.7
NCSTN-204ENST00000424645 AZIN2Q96A70 460 aa10.65□□□□□ -0.7
NCSTN-204ENST00000424645 FAM149B1Q96BN6 582 aa10.65□□□□□ -0.7
NCSTN-204ENST00000424645 PLD4Q96BZ4 506 aa10.65□□□□□ -0.7
NCSTN-204ENST00000424645 PGAP3Q96FM1 320 aaPredicted RBP10.65□□□□□ -0.7
NCSTN-204ENST00000424645 MSANTD3Q96H12 275 aa10.65□□□□□ -0.7
NCSTN-204ENST00000424645 CYP2S1Q96SQ9 504 aa10.65□□□□□ -0.7
NCSTN-204ENST00000424645 NCAPGQ9BPX3 1015 aa10.65□□□□□ -0.7
NCSTN-204ENST00000424645 TRMT61BQ9BVS5 477 aaKnown RBP10.65□□□□□ -0.7
NCSTN-204ENST00000424645 KLF16Q9BXK1 252 aaPredicted RBP10.65□□□□□ -0.7
NCSTN-204ENST00000424645 SMOC2Q9H3U7 446 aa10.65□□□□□ -0.7
NCSTN-204ENST00000424645 CCSER2Q9H7U1 834 aa10.65□□□□□ -0.7
NCSTN-204ENST00000424645 NHEJ1Q9H9Q4 299 aaPredicted RBP10.65□□□□□ -0.7
NCSTN-204ENST00000424645 LUC7LQ9NQ29 371 aaKnown RBP10.65□□□□□ -0.7
NCSTN-204ENST00000424645 SLC2A4RGQ9NR83 387 aa10.65□□□□□ -0.7
NCSTN-204ENST00000424645 PARVAQ9NVD7 372 aa10.65□□□□□ -0.7
NCSTN-204ENST00000424645 OSER1Q9NX31 292 aa10.65□□□□□ -0.7
NCSTN-204ENST00000424645 MARCH2Q9P0N8 246 aa10.65□□□□□ -0.7
NCSTN-204ENST00000424645 LSM7Q9UK45 103 aaKnown RBP10.65□□□□□ -0.7
NCSTN-204ENST00000424645 NUMBLQ9Y6R0 609 aa10.65□□□□□ -0.7
NCSTN-204ENST00000424645 SCINQ9Y6U3 715 aa10.65□□□□□ -0.7
NCSTN-204ENST00000424645 REV3LO60673 3130 aa10.64□□□□□ -0.71
NCSTN-204ENST00000424645 LEFTY2O00292 366 aa10.64□□□□□ -0.71
NCSTN-204ENST00000424645 ZNF263O14978 683 aa10.64□□□□□ -0.71
NCSTN-204ENST00000424645 AKR1B10O60218 316 aa10.64□□□□□ -0.71
NCSTN-204ENST00000424645 DAB1O75553 588 aa10.64□□□□□ -0.71
NCSTN-204ENST00000424645 SRFP11831 508 aa10.64□□□□□ -0.71
NCSTN-204ENST00000424645 KRT3P12035 628 aa10.64□□□□□ -0.71
NCSTN-204ENST00000424645 PTP4A2Q12974 167 aa10.64□□□□□ -0.71
NCSTN-204ENST00000424645 USP4Q13107 963 aa10.64□□□□□ -0.71
NCSTN-204ENST00000424645 TRIP4Q15650 581 aaPredicted RBP10.64□□□□□ -0.71
NCSTN-204ENST00000424645 ZNF77Q15935 545 aa10.64□□□□□ -0.71
NCSTN-204ENST00000424645 ASTE1Q2TB18 679 aaPredicted RBP10.64□□□□□ -0.71
NCSTN-204ENST00000424645 NUGGCQ68CJ6 796 aa10.64□□□□□ -0.71
NCSTN-204ENST00000424645 VITQ6UXI7 678 aa10.64□□□□□ -0.71
NCSTN-204ENST00000424645 MMS22LQ6ZRQ5 1243 aa10.64□□□□□ -0.71
NCSTN-204ENST00000424645 TXLNBQ8N3L3 684 aa10.64□□□□□ -0.71
NCSTN-204ENST00000424645 PDCD7Q8N8D1 485 aaKnown RBP10.64□□□□□ -0.71
NCSTN-204ENST00000424645 SH3RF2Q8TEC5 729 aa10.64□□□□□ -0.71
NCSTN-204ENST00000424645 NT5C3BQ969T7 300 aa10.64□□□□□ -0.71
NCSTN-204ENST00000424645 EXOC4Q96A65 974 aa10.64□□□□□ -0.71
NCSTN-204ENST00000424645 CALR3Q96L12 384 aaKnown RBP10.64□□□□□ -0.71
NCSTN-204ENST00000424645 C11orf70Q9BRQ4 267 aa10.64□□□□□ -0.71
NCSTN-204ENST00000424645 SELENOOQ9BVL4 669 aa10.64□□□□□ -0.71
NCSTN-204ENST00000424645 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.64□□□□□ -0.71
NCSTN-204ENST00000424645 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.64□□□□□ -0.71
NCSTN-204ENST00000424645 SLC12A6Q9UHW9 1150 aa10.64□□□□□ -0.71
NCSTN-204ENST00000424645 TMEM59LQ9UK28 342 aa10.64□□□□□ -0.71
NCSTN-204ENST00000424645 INTUQ9ULD6 942 aa10.64□□□□□ -0.71
NCSTN-204ENST00000424645 DUSP12Q9UNI6 340 aa10.64□□□□□ -0.71
NCSTN-204ENST00000424645 TLR6Q9Y2C9 796 aa10.64□□□□□ -0.71
NCSTN-204ENST00000424645 SH3BP1Q9Y3L3 701 aa10.64□□□□□ -0.71
NCSTN-204ENST00000424645 CPQQ9Y646 472 aa10.64□□□□□ -0.71
NCSTN-204ENST00000424645 MYH10P35580 1976 aa10.64□□□□□ -0.71
NCSTN-204ENST00000424645 A0A087X0T9 212 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms