RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 HCN2Q9UL51 889 aa6.73□□□□□ -1.33
SDCBP-203ENST00000424270 KCNJ14Q9UNX9 436 aa6.73□□□□□ -1.33
SDCBP-203ENST00000424270 PLAAQ9Y263 795 aa6.73□□□□□ -1.33
SDCBP-203ENST00000424270 RBM19Q9Y4C8 960 aaKnown RBP6.73□□□□□ -1.33
SDCBP-203ENST00000424270 C2CD3Q4AC94 2353 aa6.73□□□□□ -1.33
SDCBP-203ENST00000424270 FFAR2O15552 330 aa6.72□□□□□ -1.33
SDCBP-203ENST00000424270 EFSO43281 561 aa6.72□□□□□ -1.33
SDCBP-203ENST00000424270 OPA1O60313 960 aa6.72□□□□□ -1.33
SDCBP-203ENST00000424270 NEMFO60524 1076 aa6.72□□□□□ -1.33
SDCBP-203ENST00000424270 HUS1O60921 280 aa6.72□□□□□ -1.33
SDCBP-203ENST00000424270 RTN2O75298 545 aa6.72□□□□□ -1.33
SDCBP-203ENST00000424270 TNFSF15O95150 251 aa6.72□□□□□ -1.33
SDCBP-203ENST00000424270 DEXIO95424 95 aa6.72□□□□□ -1.33
SDCBP-203ENST00000424270 HMGB1P09429 215 aaKnown RBP6.72□□□□□ -1.33
SDCBP-203ENST00000424270 THEGLP0DJG4 465 aa6.72□□□□□ -1.33
SDCBP-203ENST00000424270 GSPT1P15170 499 aaKnown RBP6.72□□□□□ -1.33
SDCBP-203ENST00000424270 ACP1P24666 158 aa6.72□□□□□ -1.33
SDCBP-203ENST00000424270 CD38P28907 300 aa6.72□□□□□ -1.33
SDCBP-203ENST00000424270 CASRP41180 1078 aa6.72□□□□□ -1.33
SDCBP-203ENST00000424270 PPP3CCP48454 512 aa6.72□□□□□ -1.33
SDCBP-203ENST00000424270 ZNF132P52740 706 aa6.72□□□□□ -1.33
SDCBP-203ENST00000424270 ASIC1P78348 528 aa6.72□□□□□ -1.33
SDCBP-203ENST00000424270 EXOSC10Q01780 885 aaKnown RBP6.72□□□□□ -1.33
SDCBP-203ENST00000424270 BNIP3Q12983 259 aa6.72□□□□□ -1.33
SDCBP-203ENST00000424270 E2F5Q15329 346 aa6.72□□□□□ -1.33
SDCBP-203ENST00000424270 TBR1Q16650 682 aa6.72□□□□□ -1.33
SDCBP-203ENST00000424270 KYAT1Q16773 422 aa6.72□□□□□ -1.33
SDCBP-203ENST00000424270 TTC31Q49AM3 519 aaPredicted RBP6.72□□□□□ -1.33
SDCBP-203ENST00000424270 ARSIQ5FYB1 569 aa6.72□□□□□ -1.33
SDCBP-203ENST00000424270 MANEAQ5SRI9 462 aa6.72□□□□□ -1.33
SDCBP-203ENST00000424270 SPATA1Q5VX52 437 aa6.72□□□□□ -1.33
SDCBP-203ENST00000424270 JADE1Q6IE81 842 aa6.72□□□□□ -1.33
SDCBP-203ENST00000424270 CPLX2Q6PUV4 134 aaKnown RBP6.72□□□□□ -1.33
SDCBP-203ENST00000424270 C4orf50Q6ZRC1 276 aa6.72□□□□□ -1.33
SDCBP-203ENST00000424270 CATSPER3Q86XQ3 398 aa6.72□□□□□ -1.33
SDCBP-203ENST00000424270 OXR1Q8N573 874 aa6.72□□□□□ -1.33
SDCBP-203ENST00000424270 MAPK15Q8TD08 544 aa6.72□□□□□ -1.33
SDCBP-203ENST00000424270 ZNF560Q96MR9 790 aa6.72□□□□□ -1.33
SDCBP-203ENST00000424270 KRTAP3-3Q9BYR6 98 aa6.72□□□□□ -1.33
SDCBP-203ENST00000424270 KRTAP3-2Q9BYR7 98 aa6.72□□□□□ -1.33
SDCBP-203ENST00000424270 CIPCQ9C0C6 399 aa6.72□□□□□ -1.33
SDCBP-203ENST00000424270 BHMT2Q9H2M3 363 aa6.72□□□□□ -1.33
SDCBP-203ENST00000424270 TMEM134Q9H6X4 195 aa6.72□□□□□ -1.33
SDCBP-203ENST00000424270 SYNDIG1Q9H7V2 258 aa6.72□□□□□ -1.33
SDCBP-203ENST00000424270 NCOA5Q9HCD5 579 aaKnown RBP6.72□□□□□ -1.33
SDCBP-203ENST00000424270 CD248Q9HCU0 757 aa6.72□□□□□ -1.33
SDCBP-203ENST00000424270 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.72□□□□□ -1.332e-6■■■■■ 96.1
SDCBP-203ENST00000424270 SEPT10Q9P0V9 454 aa6.72□□□□□ -1.33
SDCBP-203ENST00000424270 ORC3Q9UBD5 711 aaPredicted RBP6.72□□□□□ -1.33
SDCBP-203ENST00000424270 MAGEC2Q9UBF1 373 aaPredicted RBP6.72□□□□□ -1.33
SDCBP-203ENST00000424270 LSM7Q9UK45 103 aaKnown RBP6.72□□□□□ -1.33
SDCBP-203ENST00000424270 ATXN7L1Q9ULK2 861 aaPredicted RBP6.72□□□□□ -1.33
SDCBP-203ENST00000424270 NCKAP1Q9Y2A7 1128 aa6.72□□□□□ -1.33
SDCBP-203ENST00000424270 LRRK2Q5S007 2527 aa6.72□□□□□ -1.33
SDCBP-203ENST00000424270 AHCTF1Q8WYP5 2266 aa6.71□□□□□ -1.33
SDCBP-203ENST00000424270 TRIP11Q15643 1979 aa6.71□□□□□ -1.33
SDCBP-203ENST00000424270 FBN2P35556 2912 aa6.71□□□□□ -1.33
SDCBP-203ENST00000424270 TMEM131Q92545 1883 aa6.71□□□□□ -1.34
SDCBP-203ENST00000424270 TTC26A0AVF1 554 aa6.71□□□□□ -1.34
SDCBP-203ENST00000424270 CLEC18AA5D8T8 446 aa6.71□□□□□ -1.34
SDCBP-203ENST00000424270 ZNF840PA6NDX5 716 aa6.71□□□□□ -1.34
SDCBP-203ENST00000424270 KPNA7A9QM74 516 aa6.71□□□□□ -1.34
SDCBP-203ENST00000424270 NPC1O15118 1278 aa6.71□□□□□ -1.34
SDCBP-203ENST00000424270 SIGLEC6O43699 453 aa6.71□□□□□ -1.34
SDCBP-203ENST00000424270 VPS4BO75351 444 aa6.71□□□□□ -1.34
SDCBP-203ENST00000424270 MED24O75448 989 aa6.71□□□□□ -1.34
SDCBP-203ENST00000424270 IFNAR1P17181 557 aa6.71□□□□□ -1.34
SDCBP-203ENST00000424270 PROZP22891 400 aa6.71□□□□□ -1.34
SDCBP-203ENST00000424270 LIG4P49917 911 aa6.71□□□□□ -1.34
SDCBP-203ENST00000424270 DUSP3P51452 185 aaPredicted RBP6.71□□□□□ -1.34
SDCBP-203ENST00000424270 SMTNP53814 917 aa6.71□□□□□ -1.34
SDCBP-203ENST00000424270 GOLGA8FQ08AF8 430 aa6.71□□□□□ -1.34
SDCBP-203ENST00000424270 GOLGA8DPQ0D2H9 430 aa6.71□□□□□ -1.34
SDCBP-203ENST00000424270 MMRN1Q13201 1228 aa6.71□□□□□ -1.34
SDCBP-203ENST00000424270 KRT32Q14532 448 aa6.71□□□□□ -1.34
SDCBP-203ENST00000424270 INTS6LQ5JSJ4 861 aaKnown RBP6.71□□□□□ -1.34
SDCBP-203ENST00000424270 KIAA0895LQ68EN5 471 aa6.71□□□□□ -1.34
SDCBP-203ENST00000424270 CLEC18BQ6UXF7 455 aa6.71□□□□□ -1.34
SDCBP-203ENST00000424270 CLEC18CQ8NCF0 446 aa6.71□□□□□ -1.34
SDCBP-203ENST00000424270 SSC4DQ8WTU2 575 aa6.71□□□□□ -1.34
SDCBP-203ENST00000424270 LEO1Q8WVC0 666 aaPredicted RBP6.71□□□□□ -1.34
SDCBP-203ENST00000424270 ATXN7L3BQ96GX2 97 aa6.71□□□□□ -1.34
SDCBP-203ENST00000424270 SLC46A1Q96NT5 459 aa6.71□□□□□ -1.34
SDCBP-203ENST00000424270 TSPAN18Q96SJ8 248 aa6.71□□□□□ -1.34
SDCBP-203ENST00000424270 LSG1Q9H089 658 aaKnown RBP6.71□□□□□ -1.34
SDCBP-203ENST00000424270 BRMS1Q9HCU9 246 aa6.71□□□□□ -1.34
SDCBP-203ENST00000424270 GEMIN8Q9NWZ8 242 aaKnown RBP6.71□□□□□ -1.34
SDCBP-203ENST00000424270 DPP3Q9NY33 737 aa6.71□□□□□ -1.34
SDCBP-203ENST00000424270 PLK2Q9NYY3 685 aa6.71□□□□□ -1.34
SDCBP-203ENST00000424270 ANAPC2Q9UJX6 822 aa6.71□□□□□ -1.34
SDCBP-203ENST00000424270 VPS4AQ9UN37 437 aa6.71□□□□□ -1.34
SDCBP-203ENST00000424270 R3HCC1Q9Y3T6 440 aaKnown RBP6.71□□□□□ -1.34
SDCBP-203ENST00000424270 MYLKQ15746 1914 aa6.71□□□□□ -1.34
SDCBP-203ENST00000424270 UTP20O75691 2785 aaKnown RBP6.71□□□□□ -1.34
SDCBP-203ENST00000424270 FLNCQ14315 2725 aa6.7□□□□□ -1.34
SDCBP-203ENST00000424270 OBSL1O75147 1896 aa6.7□□□□□ -1.34
SDCBP-203ENST00000424270 RELNP78509 3460 aa6.7□□□□□ -1.34
SDCBP-203ENST00000424270 A0A087X0B3 334 aa6.7□□□□□ -1.34
SDCBP-203ENST00000424270 M0R2N6 131 aa6.7□□□□□ -1.34
SDCBP-203ENST00000424270 PIRO00625 290 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms