RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 CENPKQ9BS16 269 aa15.78■□□□□ 0.12
C9orf3-204ENST00000424143 TEX13BQ9BXU2 312 aa15.78■□□□□ 0.12
C9orf3-204ENST00000424143 C10orf88Q9H8K7 445 aa15.78■□□□□ 0.12
C9orf3-204ENST00000424143 VCX3AQ9NNX9 186 aa15.78■□□□□ 0.12
C9orf3-204ENST00000424143 ETNK2Q9NVF9 386 aa15.78■□□□□ 0.12
C9orf3-204ENST00000424143 DNAJC28Q9NX36 388 aa15.78■□□□□ 0.12
C9orf3-204ENST00000424143 MOCS1Q9NZB8 636 aa15.78■□□□□ 0.12
C9orf3-204ENST00000424143 PCDHA11Q9Y5I1 949 aa15.78■□□□□ 0.12
C9orf3-204ENST00000424143 WASF2Q9Y6W5 498 aa15.78■□□□□ 0.12
C9orf3-204ENST00000424143 ANK1P16157 1881 aa15.78■□□□□ 0.12
C9orf3-204ENST00000424143 DOCK1Q14185 1865 aa15.78■□□□□ 0.12
C9orf3-204ENST00000424143 COL11A1P12107 1806 aaPredicted RBP15.78■□□□□ 0.12
C9orf3-204ENST00000424143 SCN4AP35499 1836 aa15.78■□□□□ 0.12
C9orf3-204ENST00000424143 IGKV6-21A0A0C4DH24 114 aa15.77■□□□□ 0.12
C9orf3-204ENST00000424143 H7C0C1 242 aa15.77■□□□□ 0.12
C9orf3-204ENST00000424143 WNT10BO00744 389 aa15.77■□□□□ 0.12
C9orf3-204ENST00000424143 RAD17O75943 681 aa15.77■□□□□ 0.12
C9orf3-204ENST00000424143 STAU1O95793 577 aaKnown RBP15.77■□□□□ 0.12
C9orf3-204ENST00000424143 ZFXP17010 805 aaPredicted RBP15.77■□□□□ 0.12
C9orf3-204ENST00000424143 CHRNA5P30532 468 aa15.77■□□□□ 0.12
C9orf3-204ENST00000424143 TNFSF9P41273 254 aa15.77■□□□□ 0.12
C9orf3-204ENST00000424143 GPD2P43304 727 aa15.77■□□□□ 0.12
C9orf3-204ENST00000424143 ATP5OP48047 213 aa15.77■□□□□ 0.12
C9orf3-204ENST00000424143 CDH6P55285 790 aa15.77■□□□□ 0.12
C9orf3-204ENST00000424143 TUBB3Q13509 450 aa15.77■□□□□ 0.12
C9orf3-204ENST00000424143 ZNF667Q5HYK9 610 aa15.77■□□□□ 0.12
C9orf3-204ENST00000424143 RABGAP1LQ5R372 815 aa15.77■□□□□ 0.12
C9orf3-204ENST00000424143 MPZL3Q6UWV2 235 aa15.77■□□□□ 0.12
C9orf3-204ENST00000424143 MARK2Q7KZI7 788 aaKnown RBP15.77■□□□□ 0.12
C9orf3-204ENST00000424143 PDSS2Q86YH6 399 aa15.77■□□□□ 0.12
C9orf3-204ENST00000424143 BTBD9Q96Q07 612 aa15.77■□□□□ 0.12
C9orf3-204ENST00000424143 ADPGKQ9BRR6 497 aa15.77■□□□□ 0.12
C9orf3-204ENST00000424143 ZNF670Q9BS34 389 aa15.77■□□□□ 0.12
C9orf3-204ENST00000424143 THTPAQ9BU02 230 aa15.77■□□□□ 0.12
C9orf3-204ENST00000424143 CALN1Q9BXU9 219 aa15.77■□□□□ 0.12
C9orf3-204ENST00000424143 STK32BQ9NY57 414 aa15.77■□□□□ 0.12
C9orf3-204ENST00000424143 ARMCX1Q9P291 453 aa15.77■□□□□ 0.12
C9orf3-204ENST00000424143 GTF2IRD1Q9UHL9 959 aa15.77■□□□□ 0.12
C9orf3-204ENST00000424143 ZNF112Q9UJU3 913 aa15.77■□□□□ 0.12
C9orf3-204ENST00000424143 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.77■□□□□ 0.12
C9orf3-204ENST00000424143 CXorf49A8MYA2 514 aaPredicted RBP15.76■□□□□ 0.11
C9orf3-204ENST00000424143 C19orf81C9J6K1 198 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 APOL1O14791 398 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 CASQ2O14958 399 aaPredicted RBP15.76■□□□□ 0.11
C9orf3-204ENST00000424143 MDM4O15151 490 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 CILPO75339 1184 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 CAPN15O75808 1086 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 ZNF189O75820 626 aaPredicted RBP15.76■□□□□ 0.11
C9orf3-204ENST00000424143 MICAL2O94851 1124 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 PABPC4LP0CB38 370 aaKnown RBP15.76■□□□□ 0.11
C9orf3-204ENST00000424143 CCDC130P13994 396 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 CD19P15391 556 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 ACAT1P24752 427 aaKnown RBP15.76■□□□□ 0.11
C9orf3-204ENST00000424143 NR2C2P49116 596 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 SP2Q02086 613 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 ASPHQ12797 758 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 CDC16Q13042 620 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 MTMR2Q13614 643 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 HIC1Q14526 733 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 SLC5A9Q2M3M2 681 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 EFHC1Q5JVL4 640 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 MEX3CQ5U5Q3 659 aaKnown RBP15.76■□□□□ 0.11
C9orf3-204ENST00000424143 C1orf146Q5VVC0 180 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 IZUMO2Q6UXV1 221 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 UNC5AQ6ZN44 842 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 SDCCAG8Q86SQ7 713 aaPredicted RBP15.76■□□□□ 0.11
C9orf3-204ENST00000424143 CTAGE3PQ8IX95 158 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 DHX37Q8IY37 1157 aaKnown RBP15.76■□□□□ 0.11
C9orf3-204ENST00000424143 CCDC33Q8N5R6 958 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 PIWIL2Q8TC59 973 aaKnown RBP15.76■□□□□ 0.11
C9orf3-204ENST00000424143 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.76■□□□□ 0.11
C9orf3-204ENST00000424143 ACTRT2Q8TDY3 377 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 CFAP36Q96G28 342 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 HAPLN3Q96S86 360 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 PEBP4Q96S96 227 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 NRDE2Q9H7Z3 1164 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 TELO2Q9Y4R8 837 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 COMMD3-BMI1R4GMX3 469 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 LCTP09848 1927 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 ACKR2O00590 384 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 MAP3K13O43283 966 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 PRPSAP2O60256 369 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 GLRA3O75311 464 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 ZBED1O96006 694 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 PRKCBP05771 671 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 SETSIPP0DME0 302 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 P4HA1P13674 534 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 IL4RP24394 825 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 CUL3Q13618 768 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 CES4AQ5XG92 561 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 MBLAC2Q68D91 279 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 DHDDSQ86SQ9 333 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 TMEM126BQ8IUX1 230 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 ST13P4Q8IZP2 240 aaPredicted RBP15.76■□□□□ 0.11
C9orf3-204ENST00000424143 PHC3Q8NDX5 983 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 CHST13Q8NET6 341 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 PRPF31Q8WWY3 499 aaKnown RBP15.76■□□□□ 0.11
C9orf3-204ENST00000424143 HSPH1Q92598 858 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 TMEM176AQ96HP8 235 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 PCYT2Q99447 389 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms