RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 EGFLAMQ63HQ2 1017 aa17.02■□□□□ 0.32
COL18A1-205ENST00000423214 SLC36A4Q6YBV0 504 aa17.02■□□□□ 0.32
COL18A1-205ENST00000423214 TADA2BQ86TJ2 420 aa17.02■□□□□ 0.32
COL18A1-205ENST00000423214 CHPFQ8IZ52 775 aa17.02■□□□□ 0.32
COL18A1-205ENST00000423214 FRMD1Q8N878 549 aa17.02■□□□□ 0.32
COL18A1-205ENST00000423214 TWNKQ96RR1 684 aa17.02■□□□□ 0.32
COL18A1-205ENST00000423214 HNRNPABQ99729 332 aaKnown RBP17.02■□□□□ 0.32
COL18A1-205ENST00000423214 CYP3A43Q9HB55 503 aa17.02■□□□□ 0.32
COL18A1-205ENST00000423214 CALCOCO1Q9P1Z2 691 aa17.02■□□□□ 0.32
COL18A1-205ENST00000423214 DNMT3LQ9UJW3 386 aa17.02■□□□□ 0.32
COL18A1-205ENST00000423214 NAGPAQ9UK23 515 aa17.02■□□□□ 0.32
COL18A1-205ENST00000423214 HPSEQ9Y251 543 aa17.02■□□□□ 0.32
COL18A1-205ENST00000423214 PCNX2A6NKB5 2137 aa17.02■□□□□ 0.31
COL18A1-205ENST00000423214 A0A1W2PQH9 124 aa17.01■□□□□ 0.31
COL18A1-205ENST00000423214 CDX4O14627 284 aaPredicted RBP17.01■□□□□ 0.31
COL18A1-205ENST00000423214 TRIM24O15164 1050 aa17.01■□□□□ 0.31
COL18A1-205ENST00000423214 RHOBTB3O94955 611 aa17.01■□□□□ 0.31
COL18A1-205ENST00000423214 CFIP05156 583 aa17.01■□□□□ 0.31
COL18A1-205ENST00000423214 PRR29P0C7W0 189 aa17.01■□□□□ 0.31
COL18A1-205ENST00000423214 RARGP13631 454 aa17.01■□□□□ 0.31
COL18A1-205ENST00000423214 GABRG2P18507 467 aa17.01■□□□□ 0.31
COL18A1-205ENST00000423214 RPL13P26373 211 aaKnown RBP17.01■□□□□ 0.31
COL18A1-205ENST00000423214 HOXD12P35452 270 aa17.01■□□□□ 0.31
COL18A1-205ENST00000423214 MAPK8P45983 427 aa17.01■□□□□ 0.31
COL18A1-205ENST00000423214 FOXC1Q12948 553 aa17.01■□□□□ 0.31
COL18A1-205ENST00000423214 C1orf220Q5T0J3 134 aa17.01■□□□□ 0.31
COL18A1-205ENST00000423214 TAS1R2Q8TE23 839 aa17.01■□□□□ 0.31
COL18A1-205ENST00000423214 BHMTQ93088 406 aa17.01■□□□□ 0.31
COL18A1-205ENST00000423214 OSER1Q9NX31 292 aa17.01■□□□□ 0.31
COL18A1-205ENST00000423214 MARK1Q9P0L2 795 aa17.01■□□□□ 0.31
COL18A1-205ENST00000423214 TP53BP1Q12888 1972 aaPredicted RBP17■□□□□ 0.31
COL18A1-205ENST00000423214 HHLA1C9JL84 531 aa17■□□□□ 0.31
COL18A1-205ENST00000423214 MDM4O15151 490 aa17■□□□□ 0.31
COL18A1-205ENST00000423214 CILPO75339 1184 aa17■□□□□ 0.31
COL18A1-205ENST00000423214 CEACAM1P13688 526 aa17■□□□□ 0.31
COL18A1-205ENST00000423214 ENGP17813 658 aa17■□□□□ 0.31
COL18A1-205ENST00000423214 CSRP1P21291 193 aaKnown RBP17■□□□□ 0.31
COL18A1-205ENST00000423214 ITPKAP23677 461 aa17■□□□□ 0.31
COL18A1-205ENST00000423214 PSMC2P35998 433 aaKnown RBP17■□□□□ 0.31
COL18A1-205ENST00000423214 DGKGP49619 791 aa17■□□□□ 0.31
COL18A1-205ENST00000423214 PSEN1P49768 467 aa17■□□□□ 0.31
COL18A1-205ENST00000423214 NDUFA8P51970 172 aa17■□□□□ 0.31
COL18A1-205ENST00000423214 ATXN3P54252 364 aaPredicted RBP17■□□□□ 0.31
COL18A1-205ENST00000423214 PPP3CAQ08209 521 aa17■□□□□ 0.31
COL18A1-205ENST00000423214 NFIL3Q16649 462 aa17■□□□□ 0.31
COL18A1-205ENST00000423214 KLHDC10Q6PID8 442 aa17■□□□□ 0.31
COL18A1-205ENST00000423214 RABEPKQ7Z6M1 372 aa17■□□□□ 0.31
COL18A1-205ENST00000423214 MIB1Q86YT6 1006 aa17■□□□□ 0.31
COL18A1-205ENST00000423214 CDK5RAP1Q96SZ6 601 aaKnown RBP17■□□□□ 0.31
COL18A1-205ENST00000423214 NMUR1Q9HB89 426 aa17■□□□□ 0.31
COL18A1-205ENST00000423214 APOBEC3GQ9HC16 384 aaKnown RBP17■□□□□ 0.31
COL18A1-205ENST00000423214 TMEM8AQ9HCN3 771 aa17■□□□□ 0.31
COL18A1-205ENST00000423214 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17■□□□□ 0.31
COL18A1-205ENST00000423214 NUDT5Q9UKK9 219 aa17■□□□□ 0.31
COL18A1-205ENST00000423214 MAPK8IP1Q9UQF2 711 aa17■□□□□ 0.31
COL18A1-205ENST00000423214 STARD13Q9Y3M8 1113 aa17■□□□□ 0.31
COL18A1-205ENST00000423214 FRYQ5TBA9 3013 aa16.99■□□□□ 0.31
COL18A1-205ENST00000423214 GREM1O60565 184 aa16.99■□□□□ 0.31
COL18A1-205ENST00000423214 ZNF217O75362 1048 aa16.99■□□□□ 0.31
COL18A1-205ENST00000423214 RALAP11233 206 aa16.99■□□□□ 0.31
COL18A1-205ENST00000423214 PLA2G4AP47712 749 aa16.99■□□□□ 0.31
COL18A1-205ENST00000423214 ZNF394Q53GI3 561 aa16.99■□□□□ 0.31
COL18A1-205ENST00000423214 SLC23A3Q6PIS1 610 aa16.99■□□□□ 0.31
COL18A1-205ENST00000423214 CCDC186Q7Z3E2 898 aa16.99■□□□□ 0.31
COL18A1-205ENST00000423214 GUF1Q8N442 669 aaKnown RBP16.99■□□□□ 0.31
COL18A1-205ENST00000423214 DEFB124Q8NES8 71 aa16.99■□□□□ 0.31
COL18A1-205ENST00000423214 CEP76Q8TAP6 659 aa16.99■□□□□ 0.31
COL18A1-205ENST00000423214 IPO4Q8TEX9 1081 aaKnown RBP16.99■□□□□ 0.31
COL18A1-205ENST00000423214 ERLEC1Q96DZ1 483 aa16.99■□□□□ 0.31
COL18A1-205ENST00000423214 SLC32A1Q9H598 525 aa16.99■□□□□ 0.31
COL18A1-205ENST00000423214 TMEM74BQ9NUR3 256 aa16.99■□□□□ 0.31
COL18A1-205ENST00000423214 RASAL2Q9UJF2 1139 aa16.99■□□□□ 0.31
COL18A1-205ENST00000423214 PILRBQ9UKJ0 227 aa16.99■□□□□ 0.31
COL18A1-205ENST00000423214 CYP8B1Q9UNU6 501 aa16.99■□□□□ 0.31
COL18A1-205ENST00000423214 A0A1W2PQF6 199 aa16.98■□□□□ 0.31
COL18A1-205ENST00000423214 STC2O76061 302 aa16.98■□□□□ 0.31
COL18A1-205ENST00000423214 NDUFV2P19404 249 aa16.98■□□□□ 0.31
COL18A1-205ENST00000423214 MXI1P50539 228 aa16.98■□□□□ 0.31
COL18A1-205ENST00000423214 KIF11P52732 1056 aa16.98■□□□□ 0.31
COL18A1-205ENST00000423214 ENPEPQ07075 957 aa16.98■□□□□ 0.31
COL18A1-205ENST00000423214 DPYDQ12882 1025 aa16.98■□□□□ 0.31
COL18A1-205ENST00000423214 ADAM9Q13443 819 aa16.98■□□□□ 0.31
COL18A1-205ENST00000423214 DUOXA1Q1HG43 343 aa16.98■□□□□ 0.31
COL18A1-205ENST00000423214 PPP1R26Q5T8A7 1209 aaPredicted RBP16.98■□□□□ 0.31
COL18A1-205ENST00000423214 PEAR1Q5VY43 1037 aaPredicted RBP16.98■□□□□ 0.31
COL18A1-205ENST00000423214 KIAA1324Q6UXG2 1013 aaKnown RBP16.98■□□□□ 0.31
COL18A1-205ENST00000423214 TOGARAM2Q6ZUX3 1019 aa16.98■□□□□ 0.31
COL18A1-205ENST00000423214 HDDC3Q8N4P3 179 aa16.98■□□□□ 0.31
COL18A1-205ENST00000423214 DEFB119Q8N690 84 aa16.98■□□□□ 0.31
COL18A1-205ENST00000423214 CCDC34Q96HJ3 373 aa16.98■□□□□ 0.31
COL18A1-205ENST00000423214 GTPBP2Q9BX10 602 aaKnown RBP16.98■□□□□ 0.31
COL18A1-205ENST00000423214 DUSP16Q9BY84 665 aa16.98■□□□□ 0.31
COL18A1-205ENST00000423214 CACNA2D2Q9NY47 1150 aa16.98■□□□□ 0.31
COL18A1-205ENST00000423214 PLK2Q9NYY3 685 aa16.98■□□□□ 0.31
COL18A1-205ENST00000423214 ZNF510Q9Y2H8 683 aa16.98■□□□□ 0.31
COL18A1-205ENST00000423214 IGF2RP11717 2491 aa16.97■□□□□ 0.31
COL18A1-205ENST00000423214 NYNRINQ9P2P1 1898 aaKnown RBP16.97■□□□□ 0.31
COL18A1-205ENST00000423214 IGHV1OR15-9A0A0B4J2B8 117 aa16.97■□□□□ 0.31
COL18A1-205ENST00000423214 PRRT4C9JH25 899 aa16.97■□□□□ 0.31
COL18A1-205ENST00000423214 GFPT1Q06210 699 aaPredicted RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms