RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 FYNP06241 537 aa9.71□□□□□ -0.86
PDGFC-202ENST00000422544 CDC25BP30305 580 aa9.71□□□□□ -0.86
PDGFC-202ENST00000422544 ATP5C1P36542 298 aaKnown RBP9.71□□□□□ -0.86
PDGFC-202ENST00000422544 EIF4A3P38919 411 aaKnown RBP9.71□□□□□ -0.86
PDGFC-202ENST00000422544 GABRB2P47870 512 aa9.71□□□□□ -0.86
PDGFC-202ENST00000422544 SLC7A9P82251 487 aa9.71□□□□□ -0.86
PDGFC-202ENST00000422544 ZXDBP98169 803 aa9.71□□□□□ -0.86
PDGFC-202ENST00000422544 SLC6A3Q01959 620 aa9.71□□□□□ -0.86
PDGFC-202ENST00000422544 CENPCQ03188 943 aa9.71□□□□□ -0.86
PDGFC-202ENST00000422544 IER5LQ5T953 404 aa9.71□□□□□ -0.86
PDGFC-202ENST00000422544 OLFML1Q6UWY5 402 aa9.71□□□□□ -0.86
PDGFC-202ENST00000422544 MTSS1LQ765P7 747 aa9.71□□□□□ -0.86
PDGFC-202ENST00000422544 RSRC2Q7L4I2 434 aaKnown RBP9.71□□□□□ -0.86
PDGFC-202ENST00000422544 TADA2BQ86TJ2 420 aa9.71□□□□□ -0.86
PDGFC-202ENST00000422544 XYLT1Q86Y38 959 aa9.71□□□□□ -0.86
PDGFC-202ENST00000422544 PHF13Q86YI8 300 aaPredicted RBP9.71□□□□□ -0.86
PDGFC-202ENST00000422544 CNGA4Q8IV77 575 aa9.71□□□□□ -0.86
PDGFC-202ENST00000422544 SLC44A3Q8N4M1 653 aa9.71□□□□□ -0.86
PDGFC-202ENST00000422544 CELF5Q8N6W0 485 aaKnown RBP9.71□□□□□ -0.86
PDGFC-202ENST00000422544 TC2NQ8N9U0 490 aa9.71□□□□□ -0.86
PDGFC-202ENST00000422544 SPC24Q8NBT2 197 aa9.71□□□□□ -0.86
PDGFC-202ENST00000422544 MSANTD4Q8NCY6 345 aa9.71□□□□□ -0.86
PDGFC-202ENST00000422544 SH3RF2Q8TEC5 729 aa9.71□□□□□ -0.86
PDGFC-202ENST00000422544 RNF139Q8WU17 664 aa9.71□□□□□ -0.86
PDGFC-202ENST00000422544 GOLGA1Q92805 767 aa9.71□□□□□ -0.86
PDGFC-202ENST00000422544 NXPE3Q969Y0 559 aa9.71□□□□□ -0.86
PDGFC-202ENST00000422544 ELSPBP1Q96BH3 223 aa9.71□□□□□ -0.86
PDGFC-202ENST00000422544 CHP1Q99653 195 aa9.71□□□□□ -0.86
PDGFC-202ENST00000422544 C11orf70Q9BRQ4 267 aa9.71□□□□□ -0.86
PDGFC-202ENST00000422544 GKN1Q9NS71 199 aa9.71□□□□□ -0.86
PDGFC-202ENST00000422544 ABCC13Q9NSE7 274 aa9.71□□□□□ -0.86
PDGFC-202ENST00000422544 ADAM22Q9P0K1 906 aa9.71□□□□□ -0.86
PDGFC-202ENST00000422544 IGSF9Q9P2J2 1179 aa9.71□□□□□ -0.86
PDGFC-202ENST00000422544 DNMT3LQ9UJW3 386 aa9.71□□□□□ -0.86
PDGFC-202ENST00000422544 ARHGAP26Q9UNA1 814 aa9.71□□□□□ -0.86
PDGFC-202ENST00000422544 NAALADL1Q9UQQ1 740 aa9.71□□□□□ -0.86
PDGFC-202ENST00000422544 CPQQ9Y646 472 aa9.71□□□□□ -0.86
PDGFC-202ENST00000422544 A0A087X0T9 212 aa9.7□□□□□ -0.86
PDGFC-202ENST00000422544 GOLGA8SH3BPF8 625 aa9.7□□□□□ -0.86
PDGFC-202ENST00000422544 LEFTY2O00292 366 aa9.7□□□□□ -0.86
PDGFC-202ENST00000422544 CAPN9O14815 690 aa9.7□□□□□ -0.86
PDGFC-202ENST00000422544 FTLP02792 175 aaPredicted RBP9.7□□□□□ -0.86
PDGFC-202ENST00000422544 FAM228BP0C875 321 aa9.7□□□□□ -0.86
PDGFC-202ENST00000422544 NCAM1P13591 858 aa9.7□□□□□ -0.86
PDGFC-202ENST00000422544 RNASE9P60153 205 aaKnown RBP9.7□□□□□ -0.86
PDGFC-202ENST00000422544 YWHAZP63104 245 aaKnown RBP9.7□□□□□ -0.86
PDGFC-202ENST00000422544 EFEMP1Q12805 493 aa9.7□□□□□ -0.86
PDGFC-202ENST00000422544 PTP4A2Q12974 167 aa9.7□□□□□ -0.86
PDGFC-202ENST00000422544 TDGQ13569 410 aa9.7□□□□□ -0.86
PDGFC-202ENST00000422544 GRM2Q14416 872 aa9.7□□□□□ -0.86
PDGFC-202ENST00000422544 ZNF268Q14587 947 aaPredicted RBP9.7□□□□□ -0.86
PDGFC-202ENST00000422544 EFHC1Q5JVL4 640 aa9.7□□□□□ -0.86
PDGFC-202ENST00000422544 SYPL2Q5VXT5 272 aa9.7□□□□□ -0.86
PDGFC-202ENST00000422544 KLHDC10Q6PID8 442 aa9.7□□□□□ -0.86
PDGFC-202ENST00000422544 VITQ6UXI7 678 aa9.7□□□□□ -0.86
PDGFC-202ENST00000422544 TOGARAM2Q6ZUX3 1019 aa9.7□□□□□ -0.86
PDGFC-202ENST00000422544 VPS36Q86VN1 386 aa9.7□□□□□ -0.86
PDGFC-202ENST00000422544 MIB1Q86YT6 1006 aa9.7□□□□□ -0.86
PDGFC-202ENST00000422544 ZDHHC17Q8IUH5 632 aa9.7□□□□□ -0.86
PDGFC-202ENST00000422544 ZNF276Q8N554 614 aa9.7□□□□□ -0.86
PDGFC-202ENST00000422544 RIN3Q8TB24 985 aa9.7□□□□□ -0.86
PDGFC-202ENST00000422544 E2F7Q96AV8 911 aa9.7□□□□□ -0.86
PDGFC-202ENST00000422544 ZFRQ96KR1 1074 aaKnown RBP9.7□□□□□ -0.86
PDGFC-202ENST00000422544 CDK5RAP1Q96SZ6 601 aaKnown RBP9.7□□□□□ -0.86
PDGFC-202ENST00000422544 KLF16Q9BXK1 252 aaPredicted RBP9.7□□□□□ -0.86
PDGFC-202ENST00000422544 SMOC2Q9H3U7 446 aa9.7□□□□□ -0.86
PDGFC-202ENST00000422544 POPDC2Q9HBU9 364 aa9.7□□□□□ -0.86
PDGFC-202ENST00000422544 MARCH2Q9P0N8 246 aa9.7□□□□□ -0.86
PDGFC-202ENST00000422544 SFMBT1Q9UHJ3 866 aa9.7□□□□□ -0.86
PDGFC-202ENST00000422544 MUTYHQ9UIF7 546 aa9.7□□□□□ -0.86
PDGFC-202ENST00000422544 RASAL2Q9UJF2 1139 aa9.7□□□□□ -0.86
PDGFC-202ENST00000422544 MYH10P35580 1976 aa9.7□□□□□ -0.86
PDGFC-202ENST00000422544 SLC12A8A0AV02 714 aa9.69□□□□□ -0.86
PDGFC-202ENST00000422544 SCAMP3O14828 347 aaKnown RBP9.69□□□□□ -0.86
PDGFC-202ENST00000422544 NARSO43776 548 aaKnown RBP9.69□□□□□ -0.86
PDGFC-202ENST00000422544 HSF2BPO75031 334 aa9.69□□□□□ -0.86
PDGFC-202ENST00000422544 RTN2O75298 545 aa9.69□□□□□ -0.86
PDGFC-202ENST00000422544 GJB6O95452 261 aa9.69□□□□□ -0.86
PDGFC-202ENST00000422544 GLI1P08151 1106 aa9.69□□□□□ -0.86
PDGFC-202ENST00000422544 HMBSP08397 361 aa9.69□□□□□ -0.86
PDGFC-202ENST00000422544 IRF1P10914 325 aa9.69□□□□□ -0.86
PDGFC-202ENST00000422544 GZMAP12544 262 aa9.69□□□□□ -0.86
PDGFC-202ENST00000422544 PSMC3P17980 439 aa9.69□□□□□ -0.86
PDGFC-202ENST00000422544 GPC5P78333 572 aa9.69□□□□□ -0.86
PDGFC-202ENST00000422544 GFPT1Q06210 699 aaPredicted RBP9.69□□□□□ -0.86
PDGFC-202ENST00000422544 TCF15Q12870 199 aa9.69□□□□□ -0.86
PDGFC-202ENST00000422544 ASTE1Q2TB18 679 aaPredicted RBP9.69□□□□□ -0.86
PDGFC-202ENST00000422544 GREB1Q4ZG55 1949 aa9.69□□□□□ -0.86
PDGFC-202ENST00000422544 DCAF6Q58WW2 860 aa9.69□□□□□ -0.86
PDGFC-202ENST00000422544 FAM102AQ5T9C2 384 aaPredicted RBP9.69□□□□□ -0.86
PDGFC-202ENST00000422544 MON1BQ7L1V2 547 aa9.69□□□□□ -0.86
PDGFC-202ENST00000422544 SLC26A9Q7LBE3 791 aa9.69□□□□□ -0.86
PDGFC-202ENST00000422544 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.69□□□□□ -0.86
PDGFC-202ENST00000422544 MFSD6LQ8IWD5 586 aa9.69□□□□□ -0.86
PDGFC-202ENST00000422544 YAF2Q8IY57 180 aa9.69□□□□□ -0.86
PDGFC-202ENST00000422544 MCOLN2Q8IZK6 566 aa9.69□□□□□ -0.86
PDGFC-202ENST00000422544 DEFB106AQ8N104 65 aa9.69□□□□□ -0.86
PDGFC-202ENST00000422544 DOCK8Q8NF50 2099 aa9.69□□□□□ -0.86
PDGFC-202ENST00000422544 ADAM32Q8TC27 787 aa9.69□□□□□ -0.86
PDGFC-202ENST00000422544 BPIFB1Q8TDL5 484 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms