RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 MIB1Q86YT6 1006 aa26.8■■□□□ 1.88
SMDT1-202ENST00000422252 NETO1Q8TDF5 533 aa26.8■■□□□ 1.88
SMDT1-202ENST00000422252 XPO6Q96QU8 1125 aaKnown RBP26.8■■□□□ 1.88
SMDT1-202ENST00000422252 RTKNQ9BST9 563 aa26.8■■□□□ 1.88
SMDT1-202ENST00000422252 BBS2Q9BXC9 721 aa26.8■■□□□ 1.88
SMDT1-202ENST00000422252 TPSD1Q9BZJ3 242 aa26.8■■□□□ 1.88
SMDT1-202ENST00000422252 DUSP15Q9H1R2 295 aaPredicted RBP26.8■■□□□ 1.88
SMDT1-202ENST00000422252 MARK1Q9P0L2 795 aa26.8■■□□□ 1.88
SMDT1-202ENST00000422252 WDR35Q9P2L0 1181 aa26.8■■□□□ 1.88
SMDT1-202ENST00000422252 HESX1Q9UBX0 185 aa26.8■■□□□ 1.88
SMDT1-202ENST00000422252 CTNND2Q9UQB3 1225 aa26.8■■□□□ 1.88
SMDT1-202ENST00000422252 NEDD8-MDP1E9PL57 170 aa26.79■■□□□ 1.88
SMDT1-202ENST00000422252 SGK1O00141 431 aa26.79■■□□□ 1.88
SMDT1-202ENST00000422252 BIN1O00499 593 aa26.79■■□□□ 1.88
SMDT1-202ENST00000422252 XPO1O14980 1071 aaKnown RBP26.79■■□□□ 1.88
SMDT1-202ENST00000422252 DCLK1O15075 740 aa26.79■■□□□ 1.88
SMDT1-202ENST00000422252 STC2O76061 302 aa26.79■■□□□ 1.88
SMDT1-202ENST00000422252 ALDH1A2O94788 518 aa26.79■■□□□ 1.88
SMDT1-202ENST00000422252 CD19P15391 556 aa26.79■■□□□ 1.88
SMDT1-202ENST00000422252 TKTL1P51854 596 aa26.79■■□□□ 1.88
SMDT1-202ENST00000422252 USP39Q53GS9 565 aaKnown RBP26.79■■□□□ 1.88
SMDT1-202ENST00000422252 TPGS1Q6ZTW0 290 aa26.79■■□□□ 1.88
SMDT1-202ENST00000422252 TERB1Q8NA31 727 aa26.79■■□□□ 1.88
SMDT1-202ENST00000422252 MDGA1Q8NFP4 955 aa26.79■■□□□ 1.88
SMDT1-202ENST00000422252 KCNV2Q8TDN2 545 aa26.79■■□□□ 1.88
SMDT1-202ENST00000422252 NT5C1BQ96P26 610 aa26.79■■□□□ 1.88
SMDT1-202ENST00000422252 RASAL2Q9UJF2 1139 aa26.79■■□□□ 1.88
SMDT1-202ENST00000422252 PCDHGA5Q9Y5G8 931 aa26.79■■□□□ 1.88
SMDT1-202ENST00000422252 SPAG17Q6Q759 2223 aa26.79■■□□□ 1.88
SMDT1-202ENST00000422252 CACNA1AO00555 2505 aa26.79■■□□□ 1.88
SMDT1-202ENST00000422252 RALGAPA1Q6GYQ0 2036 aa26.78■■□□□ 1.88
SMDT1-202ENST00000422252 LOC105378220A0A1B0GUY1 285 aaPredicted RBP26.78■■□□□ 1.88
SMDT1-202ENST00000422252 CACNG3O60359 315 aa26.78■■□□□ 1.88
SMDT1-202ENST00000422252 RHOBTB1O94844 696 aa26.78■■□□□ 1.88
SMDT1-202ENST00000422252 VDRP11473 427 aa26.78■■□□□ 1.88
SMDT1-202ENST00000422252 TYRP14679 529 aa26.78■■□□□ 1.88
SMDT1-202ENST00000422252 HNRNPLP14866 589 aaKnown RBP eCLIP26.78■■□□□ 1.88
SMDT1-202ENST00000422252 COG7P83436 770 aa26.78■■□□□ 1.88
SMDT1-202ENST00000422252 PDE4CQ08493 712 aa26.78■■□□□ 1.88
SMDT1-202ENST00000422252 BST2Q10589 180 aaKnown RBP26.78■■□□□ 1.88
SMDT1-202ENST00000422252 CETN1Q12798 172 aa26.78■■□□□ 1.88
SMDT1-202ENST00000422252 EFEMP1Q12805 493 aa26.78■■□□□ 1.88
SMDT1-202ENST00000422252 ELF2Q15723 593 aa26.78■■□□□ 1.88
SMDT1-202ENST00000422252 C10orf76Q5T2E6 689 aa26.78■■□□□ 1.88
SMDT1-202ENST00000422252 GRAMD4Q6IC98 578 aa26.78■■□□□ 1.88
SMDT1-202ENST00000422252 POLMQ9NP87 494 aaPredicted RBP26.78■■□□□ 1.88
SMDT1-202ENST00000422252 ZDHHC4Q9NPG8 344 aa26.78■■□□□ 1.88
SMDT1-202ENST00000422252 DNAJC17Q9NVM6 304 aaKnown RBP26.78■■□□□ 1.88
SMDT1-202ENST00000422252 KIAA1257Q9ULG3 409 aa26.78■■□□□ 1.88
SMDT1-202ENST00000422252 ZNF510Q9Y2H8 683 aa26.78■■□□□ 1.88
SMDT1-202ENST00000422252 TULP2O00295 520 aa26.77■■□□□ 1.88
SMDT1-202ENST00000422252 TRIM24O15164 1050 aa26.77■■□□□ 1.88
SMDT1-202ENST00000422252 P4HA2O15460 535 aa26.77■■□□□ 1.88
SMDT1-202ENST00000422252 ADAM23O75077 832 aa26.77■■□□□ 1.88
SMDT1-202ENST00000422252 ZBED1O96006 694 aa26.77■■□□□ 1.88
SMDT1-202ENST00000422252 ZNF806P0C7X5 589 aa26.77■■□□□ 1.88
SMDT1-202ENST00000422252 YWHAGP61981 247 aaKnown RBP eCLIP26.77■■□□□ 1.88
SMDT1-202ENST00000422252 CCDC6Q16204 474 aa26.77■■□□□ 1.88
SMDT1-202ENST00000422252 PM20D1Q6GTS8 502 aa26.77■■□□□ 1.88
SMDT1-202ENST00000422252 TRMT11Q7Z4G4 463 aaKnown RBP26.77■■□□□ 1.88
SMDT1-202ENST00000422252 C11orf74Q86VG3 221 aa26.77■■□□□ 1.88
SMDT1-202ENST00000422252 ZNF513Q8N8E2 541 aaPredicted RBP26.77■■□□□ 1.88
SMDT1-202ENST00000422252 INVSQ9Y283 1065 aa26.77■■□□□ 1.88
SMDT1-202ENST00000422252 GBP1P32455 592 aa26.76■■□□□ 1.87
SMDT1-202ENST00000422252 STX17P56962 302 aa26.76■■□□□ 1.87
SMDT1-202ENST00000422252 PAK1Q13153 545 aa26.76■■□□□ 1.87
SMDT1-202ENST00000422252 TMEM270Q6UE05 265 aa26.76■■□□□ 1.87
SMDT1-202ENST00000422252 RSRC2Q7L4I2 434 aaKnown RBP26.76■■□□□ 1.87
SMDT1-202ENST00000422252 ULBP1Q9BZM6 244 aa26.76■■□□□ 1.87
SMDT1-202ENST00000422252 LRRC4Q9HBW1 653 aa26.76■■□□□ 1.87
SMDT1-202ENST00000422252 MED19A0JLT2 244 aaPredicted RBP26.75■■□□□ 1.87
SMDT1-202ENST00000422252 O00370 1275 aa26.75■■□□□ 1.87
SMDT1-202ENST00000422252 SLC30A4O14863 429 aa26.75■■□□□ 1.87
SMDT1-202ENST00000422252 GNA14O95837 355 aa26.75■■□□□ 1.87
SMDT1-202ENST00000422252 KLKB1P03952 638 aa26.75■■□□□ 1.87
SMDT1-202ENST00000422252 HMBSP08397 361 aa26.75■■□□□ 1.87
SMDT1-202ENST00000422252 PAEPP09466 180 aa26.75■■□□□ 1.87
SMDT1-202ENST00000422252 MPLP40238 635 aa26.75■■□□□ 1.87
SMDT1-202ENST00000422252 PLA2G2CQ5R387 149 aa26.75■■□□□ 1.87
SMDT1-202ENST00000422252 PPM1KQ8N3J5 372 aa26.75■■□□□ 1.87
SMDT1-202ENST00000422252 C12orf50Q8NA57 414 aaPredicted RBP26.75■■□□□ 1.87
SMDT1-202ENST00000422252 LMO3Q8TAP4 145 aa26.75■■□□□ 1.87
SMDT1-202ENST00000422252 UBA3Q8TBC4 463 aa26.75■■□□□ 1.87
SMDT1-202ENST00000422252 DCLK3Q9C098 648 aa26.75■■□□□ 1.87
SMDT1-202ENST00000422252 MARCH2Q9P0N8 246 aa26.75■■□□□ 1.87
SMDT1-202ENST00000422252 STRIP2Q9ULQ0 834 aa26.75■■□□□ 1.87
SMDT1-202ENST00000422252 STARD13Q9Y3M8 1113 aa26.75■■□□□ 1.87
SMDT1-202ENST00000422252 PCDHB4Q9Y5E5 795 aa26.75■■□□□ 1.87
SMDT1-202ENST00000422252 SDK1Q7Z5N4 2213 aa26.75■■□□□ 1.87
SMDT1-202ENST00000422252 GDF9O60383 454 aa26.74■■□□□ 1.87
SMDT1-202ENST00000422252 SETSIPP0DME0 302 aa26.74■■□□□ 1.87
SMDT1-202ENST00000422252 ADIGQ0VDE8 80 aa26.74■■□□□ 1.87
SMDT1-202ENST00000422252 SF3A2Q15428 464 aaKnown RBP26.74■■□□□ 1.87
SMDT1-202ENST00000422252 AASDHQ4L235 1098 aaPredicted RBP26.74■■□□□ 1.87
SMDT1-202ENST00000422252 TRIM59Q8IWR1 403 aa26.74■■□□□ 1.87
SMDT1-202ENST00000422252 OLIG1Q8TAK6 271 aa26.74■■□□□ 1.87
SMDT1-202ENST00000422252 IPO9Q96P70 1041 aaKnown RBP26.74■■□□□ 1.87
SMDT1-202ENST00000422252 CORO1AP31146 461 aaKnown RBP26.73■■□□□ 1.87
SMDT1-202ENST00000422252 CHKAP35790 457 aa26.73■■□□□ 1.87
SMDT1-202ENST00000422252 DGKGP49619 791 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms