RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 ATP6V0A1Q93050 837 aa5.64□□□□□ -1.51
SFXN1-202ENST00000421887 MKL1Q969V6 931 aa5.64□□□□□ -1.51
SFXN1-202ENST00000421887 CHMP4CQ96CF2 233 aa5.64□□□□□ -1.51
SFXN1-202ENST00000421887 NECTIN4Q96NY8 510 aa5.64□□□□□ -1.51
SFXN1-202ENST00000421887 RTKNQ9BST9 563 aa5.64□□□□□ -1.51
SFXN1-202ENST00000421887 APOL5Q9BWW9 433 aa5.64□□□□□ -1.51
SFXN1-202ENST00000421887 CPEB1Q9BZB8 566 aaKnown RBP5.64□□□□□ -1.51
SFXN1-202ENST00000421887 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.64□□□□□ -1.51
SFXN1-202ENST00000421887 FANCMQ8IYD8 2048 aa5.64□□□□□ -1.51
SFXN1-202ENST00000421887 VPS13AQ96RL7 3174 aa5.63□□□□□ -1.51
SFXN1-202ENST00000421887 C17orf102A2RUQ5 167 aa5.63□□□□□ -1.51
SFXN1-202ENST00000421887 GOLIM4O00461 696 aa5.63□□□□□ -1.51
SFXN1-202ENST00000421887 KINO60870 393 aaKnown RBP5.63□□□□□ -1.51
SFXN1-202ENST00000421887 DNAJC6O75061 913 aa5.63□□□□□ -1.51
SFXN1-202ENST00000421887 CAND2O75155 1236 aa5.63□□□□□ -1.51
SFXN1-202ENST00000421887 IGLV2-14P01704 120 aa5.63□□□□□ -1.51
SFXN1-202ENST00000421887 ZNF286BP0CG31 522 aa5.63□□□□□ -1.51
SFXN1-202ENST00000421887 TSPY3P0CV98 308 aa5.63□□□□□ -1.51
SFXN1-202ENST00000421887 TSPY8P0CW00 308 aa5.63□□□□□ -1.51
SFXN1-202ENST00000421887 HOXB8P17481 243 aaPredicted RBP5.63□□□□□ -1.51
SFXN1-202ENST00000421887 MCCP23508 829 aa5.63□□□□□ -1.51
SFXN1-202ENST00000421887 SNAP25P60880 206 aa5.63□□□□□ -1.51
SFXN1-202ENST00000421887 CAMK1Q14012 370 aa5.63□□□□□ -1.51
SFXN1-202ENST00000421887 LY6KQ17RY6 165 aa5.63□□□□□ -1.51
SFXN1-202ENST00000421887 TRIM71Q2Q1W2 868 aaKnown RBP5.63□□□□□ -1.51
SFXN1-202ENST00000421887 SPOUT1Q5T280 376 aaKnown RBP5.63□□□□□ -1.51
SFXN1-202ENST00000421887 PRAMEF9Q5VWM5 478 aa5.63□□□□□ -1.51
SFXN1-202ENST00000421887 FOXB2Q5VYV0 432 aa5.63□□□□□ -1.51
SFXN1-202ENST00000421887 ANKRD54Q6NXT1 300 aa5.63□□□□□ -1.51
SFXN1-202ENST00000421887 SPATC1Q76KD6 591 aa5.63□□□□□ -1.51
SFXN1-202ENST00000421887 AACSQ86V21 672 aa5.63□□□□□ -1.51
SFXN1-202ENST00000421887 SERINC5Q86VE9 423 aa5.63□□□□□ -1.51
SFXN1-202ENST00000421887 SRRM1Q8IYB3 904 aaKnown RBP5.63□□□□□ -1.51
SFXN1-202ENST00000421887 TDRD5Q8NAT2 981 aaKnown RBP5.63□□□□□ -1.51
SFXN1-202ENST00000421887 OR52N2Q8NGI0 321 aa5.63□□□□□ -1.51
SFXN1-202ENST00000421887 SPPL3Q8TCT6 385 aa5.63□□□□□ -1.51
SFXN1-202ENST00000421887 RIN2Q8WYP3 895 aaPredicted RBP5.63□□□□□ -1.51
SFXN1-202ENST00000421887 CEP95Q96GE4 821 aa5.63□□□□□ -1.51
SFXN1-202ENST00000421887 DCLRE1CQ96SD1 692 aaKnown RBP5.63□□□□□ -1.51
SFXN1-202ENST00000421887 CELF4Q9BZC1 486 aaKnown RBP5.63□□□□□ -1.51
SFXN1-202ENST00000421887 KIAA1586Q9HCI6 787 aa5.63□□□□□ -1.51
SFXN1-202ENST00000421887 MTMR4Q9NYA4 1195 aa5.63□□□□□ -1.51
SFXN1-202ENST00000421887 PNMA2Q9UL42 364 aa5.63□□□□□ -1.51
SFXN1-202ENST00000421887 TTC3P53804 2025 aa5.62□□□□□ -1.51
SFXN1-202ENST00000421887 PIPSLA2A3N6 862 aa5.62□□□□□ -1.51
SFXN1-202ENST00000421887 C2CD4DB7Z1M9 353 aa5.62□□□□□ -1.51
SFXN1-202ENST00000421887 PI15O43692 258 aa5.62□□□□□ -1.51
SFXN1-202ENST00000421887 PLA2G6O60733 806 aa5.62□□□□□ -1.51
SFXN1-202ENST00000421887 ARIH2O95376 493 aa5.62□□□□□ -1.51
SFXN1-202ENST00000421887 F2P00734 622 aa5.62□□□□□ -1.51
SFXN1-202ENST00000421887 CFBP00751 764 aa5.62□□□□□ -1.51
SFXN1-202ENST00000421887 STAG3L1P0CL83 205 aa5.62□□□□□ -1.51
SFXN1-202ENST00000421887 DNAJB1P25685 340 aa5.62□□□□□ -1.51
SFXN1-202ENST00000421887 RARSP54136 660 aaKnown RBP5.62□□□□□ -1.51
SFXN1-202ENST00000421887 UBE3AQ05086 875 aa5.62□□□□□ -1.51
SFXN1-202ENST00000421887 ITIH3Q06033 890 aa5.62□□□□□ -1.51
SFXN1-202ENST00000421887 DUSP6Q16828 381 aa5.62□□□□□ -1.51
SFXN1-202ENST00000421887 CCDC96Q2M329 555 aa5.62□□□□□ -1.51
SFXN1-202ENST00000421887 CCDC184Q52MB2 194 aa5.62□□□□□ -1.51
SFXN1-202ENST00000421887 OVCH1Q7RTY7 1134 aa5.62□□□□□ -1.51
SFXN1-202ENST00000421887 C9orf106Q8NAJ2 232 aa5.62□□□□□ -1.51
SFXN1-202ENST00000421887 CPEB3Q8NE35 698 aaKnown RBP5.62□□□□□ -1.51
SFXN1-202ENST00000421887 OR5M3Q8NGP4 307 aa5.62□□□□□ -1.51
SFXN1-202ENST00000421887 EAF2Q96CJ1 260 aaPredicted RBP5.62□□□□□ -1.51
SFXN1-202ENST00000421887 HAPLN2Q9GZV7 340 aa5.62□□□□□ -1.51
SFXN1-202ENST00000421887 SMOC2Q9H3U7 446 aa5.62□□□□□ -1.51
SFXN1-202ENST00000421887 ING3Q9NXR8 418 aa5.62□□□□□ -1.51
SFXN1-202ENST00000421887 USP18Q9UMW8 372 aa5.62□□□□□ -1.51
SFXN1-202ENST00000421887 STX8Q9UNK0 236 aa5.62□□□□□ -1.51
SFXN1-202ENST00000421887 CHD8Q9HCK8 2581 aa5.62□□□□□ -1.51
SFXN1-202ENST00000421887 FAM208BQ5VWN6 2430 aa5.62□□□□□ -1.51
SFXN1-202ENST00000421887 CEP250Q9BV73 2442 aa5.62□□□□□ -1.51
SFXN1-202ENST00000421887 DMXL1Q9Y485 3027 aa5.61□□□□□ -1.51
SFXN1-202ENST00000421887 CFAP47Q6ZTR5 3102 aa5.61□□□□□ -1.51
SFXN1-202ENST00000421887 ZFHX4Q86UP3 3567 aa5.61□□□□□ -1.51
SFXN1-202ENST00000421887 UBA6A0AVT1 1052 aaPredicted RBP5.61□□□□□ -1.51
SFXN1-202ENST00000421887 GAGE12BA1L429 117 aa5.61□□□□□ -1.51
SFXN1-202ENST00000421887 GAGE12HA6NDE8 117 aa5.61□□□□□ -1.51
SFXN1-202ENST00000421887 HAS3O00219 553 aa5.61□□□□□ -1.51
SFXN1-202ENST00000421887 LEFTY2O00292 366 aa5.61□□□□□ -1.51
SFXN1-202ENST00000421887 SPTBN2O15020 2390 aa5.61□□□□□ -1.51
SFXN1-202ENST00000421887 PRDM1O75626 825 aa5.61□□□□□ -1.51
SFXN1-202ENST00000421887 BCAR3O75815 825 aa5.61□□□□□ -1.51
SFXN1-202ENST00000421887 SLC3A2P08195 630 aaKnown RBP5.61□□□□□ -1.51
SFXN1-202ENST00000421887 LINC00271P0C7V0 271 aa5.61□□□□□ -1.51
SFXN1-202ENST00000421887 MTHFRP42898 656 aa5.61□□□□□ -1.51
SFXN1-202ENST00000421887 RNASE9P60153 205 aaKnown RBP5.61□□□□□ -1.51
SFXN1-202ENST00000421887 RPS6P62753 249 aaKnown RBP5.61□□□□□ -1.51
SFXN1-202ENST00000421887 ARHGAP1Q07960 439 aa5.61□□□□□ -1.51
SFXN1-202ENST00000421887 TDGQ13569 410 aa5.61□□□□□ -1.51
SFXN1-202ENST00000421887 STXBP2Q15833 593 aa5.61□□□□□ -1.51
SFXN1-202ENST00000421887 BEAN1Q3B7T3 259 aa5.61□□□□□ -1.51
SFXN1-202ENST00000421887 SPECC1Q5M775 1068 aa5.61□□□□□ -1.51
SFXN1-202ENST00000421887 ZSCAN25Q6NSZ9 544 aa5.61□□□□□ -1.51
SFXN1-202ENST00000421887 CC2D1AQ6P1N0 951 aaPredicted RBP5.61□□□□□ -1.51
SFXN1-202ENST00000421887 SLC30A10Q6XR72 485 aa5.61□□□□□ -1.51
SFXN1-202ENST00000421887 TMEM184AQ6ZMB5 413 aa5.61□□□□□ -1.51
SFXN1-202ENST00000421887 BRAPQ7Z569 592 aa5.61□□□□□ -1.51
SFXN1-202ENST00000421887 ERC1Q8IUD2 1116 aa5.61□□□□□ -1.51
SFXN1-202ENST00000421887 THNSL1Q8IYQ7 743 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms