RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 TYW3Q6IPR3 259 aaKnown RBP12.7□□□□□ -0.38
CLCN4-203ENST00000421085 SNX32Q86XE0 403 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 CBWD1Q9BRT8 395 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 KLHL31Q9H511 634 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 WDCPQ9H6R7 721 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 GPAMQ9HCL2 828 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 VPS9D1Q9Y2B5 631 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 PLA2R1Q13018 1463 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 TRIM43BA6NCK2 446 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 STX7O15400 261 aaKnown RBP12.7□□□□□ -0.38
CLCN4-203ENST00000421085 UNC5CO95185 931 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 NR3C2P08235 984 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 RARAP10276 462 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 CDC16Q13042 620 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 ARHGEF7Q14155 803 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 ACAP1Q15027 740 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 OLFML1Q6UWY5 402 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 NANOGNBQ7Z5D8 188 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 DHRSXQ8N5I4 330 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 STKLD1Q8NE28 680 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 ENKURQ8TC29 256 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 FAM172AQ8WUF8 416 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 FAM120BQ96EK7 910 aaKnown RBP12.7□□□□□ -0.38
CLCN4-203ENST00000421085 MCRS1Q96EZ8 462 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 NSMCE2Q96MF7 247 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 DGCR6LQ9BY27 220 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 CLEC4MQ9H2X3 399 aaPredicted RBP12.7□□□□□ -0.38
CLCN4-203ENST00000421085 C6orf203Q9P0P8 240 aaPredicted RBP12.7□□□□□ -0.38
CLCN4-203ENST00000421085 OVOS2A0A0G2JMS6 1433 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 CCDC130P13994 396 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 BFSP2Q13515 415 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 TAF5Q15542 800 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 EID3Q8N140 333 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 SEPT1Q8WYJ6 367 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 RRN3Q9NYV6 651 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 MAP3K4Q9Y6R4 1608 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 HS6ST1O60243 411 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 EIF2S1P05198 315 aaKnown RBP12.7□□□□□ -0.38
CLCN4-203ENST00000421085 ADRA1DP25100 572 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 PRKAA1Q13131 559 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 RGS21Q2M5E4 152 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 CCDC153Q494R4 210 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 ARMC3Q5W041 872 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 FAM45BPQ6NSW5 357 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 ERO1BQ86YB8 467 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 BHLHE22Q8NFJ8 381 aaPredicted RBP12.7□□□□□ -0.38
CLCN4-203ENST00000421085 LRRC4BQ9NT99 713 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 CLIC5Q9NZA1 410 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 ABCC3O15438 1527 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 PGM3O95394 542 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 MGAT5Q09328 741 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 TMEM62Q0P6H9 643 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 POLD3Q15054 466 aaPredicted RBP12.69□□□□□ -0.38
CLCN4-203ENST00000421085 SPANXN2Q5MJ10 180 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 ZNF57Q68EA5 555 aaPredicted RBP12.69□□□□□ -0.38
CLCN4-203ENST00000421085 STK32CQ86UX6 486 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 ACTL9Q8TC94 416 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 SEMA4DQ92854 862 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 RNF145Q96MT1 663 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 CNPY3Q9BT09 278 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 SERHL2Q9H4I8 314 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 SERHLQ9NQF3 203 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 ANKEF1Q9NU02 776 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 CRLS1Q9UJA2 301 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 RPS6KA5O75582 802 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 ALDH1A3P47895 512 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 HMGCS2P54868 508 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 PRMT9Q6P2P2 845 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 RNFT2Q96EX2 444 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 DEPDC7Q96QD5 511 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 C9orf16Q9BUW7 83 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 SMARCAD1Q9H4L7 1026 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 NRDE2Q9H7Z3 1164 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 STARD13Q9Y3M8 1113 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 TBKBP1A7MCY6 615 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 SHBGP04278 402 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 IRF1P10914 325 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 NUP62P37198 522 aaPredicted RBP12.69□□□□□ -0.38
CLCN4-203ENST00000421085 CNTN1Q12860 1018 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 SPDYCQ5MJ68 293 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 ZNF467Q7Z7K2 595 aaPredicted RBP12.69□□□□□ -0.38
CLCN4-203ENST00000421085 KBTBD2Q8IY47 623 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 FAM81AQ8TBF8 368 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 CKAP2Q8WWK9 683 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 ARHGEF3Q9NR81 526 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 DDIT4Q9NX09 232 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 VTI1BQ9UEU0 232 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 ITGB1BP2Q9UKP3 347 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 KBTBD13C9JR72 458 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 CYBBP04839 570 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 CYP2C8P10632 490 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 PIK3R1P27986 724 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 GSSP48637 474 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 PKNOX1P55347 436 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 CNGA2Q16280 664 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 GLRA4Q5JXX5 417 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 C11orf88Q6PI97 169 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 DDX53Q86TM3 631 aaKnown RBP12.69□□□□□ -0.38
CLCN4-203ENST00000421085 NT5DC3Q86UY8 548 aa12.69□□□□□ -0.38
CLCN4-203ENST00000421085 PHF21BQ96EK2 531 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms