RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 FAF2Q96CS3 445 aa9.15□□□□□ -0.94
SNCA-206ENST00000420646 CHMP6Q96FZ7 201 aa9.15□□□□□ -0.94
SNCA-206ENST00000420646 SEC16BQ96JE7 1060 aa9.15□□□□□ -0.94
SNCA-206ENST00000420646 SENP6Q9GZR1 1112 aaPredicted RBP9.15□□□□□ -0.94
SNCA-206ENST00000420646 NRDE2Q9H7Z3 1164 aa9.15□□□□□ -0.94
SNCA-206ENST00000420646 TMEM88BA6NKF7 163 aa9.15□□□□□ -0.95
SNCA-206ENST00000420646 TCP11X1B4DZS4 312 aa9.15□□□□□ -0.95
SNCA-206ENST00000420646 FAM72CH0Y354 149 aa9.15□□□□□ -0.95
SNCA-206ENST00000420646 APOL1O14791 398 aa9.15□□□□□ -0.95
SNCA-206ENST00000420646 CA12O43570 354 aa9.15□□□□□ -0.95
SNCA-206ENST00000420646 FAM155BO75949 473 aa9.15□□□□□ -0.95
SNCA-206ENST00000420646 METTL18O95568 372 aa9.15□□□□□ -0.95
SNCA-206ENST00000420646 SULT1E1P49888 294 aa9.15□□□□□ -0.95
SNCA-206ENST00000420646 TKTL1P51854 596 aa9.15□□□□□ -0.95
SNCA-206ENST00000420646 GJA9P57773 515 aa9.15□□□□□ -0.95
SNCA-206ENST00000420646 FAM72AQ5TYM5 149 aa9.15□□□□□ -0.95
SNCA-206ENST00000420646 OTUD1Q5VV17 481 aaPredicted RBP9.15□□□□□ -0.95
SNCA-206ENST00000420646 FAM72DQ6L9T8 149 aa9.15□□□□□ -0.95
SNCA-206ENST00000420646 DSTYKQ6XUX3 929 aa9.15□□□□□ -0.95
SNCA-206ENST00000420646 SLC26A9Q7LBE3 791 aa9.15□□□□□ -0.95
SNCA-206ENST00000420646 FAM72BQ86X60 149 aa9.15□□□□□ -0.95
SNCA-206ENST00000420646 TTC13Q8NBP0 860 aa9.15□□□□□ -0.95
SNCA-206ENST00000420646 FBF1Q8TES7 1133 aa9.15□□□□□ -0.95
SNCA-206ENST00000420646 MAML1Q92585 1016 aa9.15□□□□□ -0.95
SNCA-206ENST00000420646 DUSP16Q9BY84 665 aa9.15□□□□□ -0.95
SNCA-206ENST00000420646 ROPN1BQ9BZX4 212 aaPredicted RBP9.15□□□□□ -0.95
SNCA-206ENST00000420646 ROPN1Q9HAT0 212 aaPredicted RBP9.15□□□□□ -0.95
SNCA-206ENST00000420646 FGFR1OP2Q9NVK5 253 aa9.15□□□□□ -0.95
SNCA-206ENST00000420646 TRPV2Q9Y5S1 764 aa9.15□□□□□ -0.95
SNCA-206ENST00000420646 M0QYT0 321 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 CDH16O75309 829 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 FYNP06241 537 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 NPR3P17342 541 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 NUMBP49757 651 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 CRADDP78560 199 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 OLIG2Q13516 323 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 ACAP1Q15027 740 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 STILQ15468 1287 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 MFSD14CQ5VZR4 134 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 KCNT2Q6UVM3 1135 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 PRPF39Q86UA1 669 aaKnown RBP9.14□□□□□ -0.95
SNCA-206ENST00000420646 SERINC5Q86VE9 423 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 MAP7D3Q8IWC1 876 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 NME8Q8N427 588 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 ZMIZ2Q8NF64 920 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 CSPG4P5Q96PW8 444 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 ADAM2Q99965 735 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 C11orf84Q9BUA3 381 aaPredicted RBP9.14□□□□□ -0.95
SNCA-206ENST00000420646 ULBP1Q9BZM6 244 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 CNOT10Q9H9A5 744 aaKnown RBP9.14□□□□□ -0.95
SNCA-206ENST00000420646 LRRC4Q9HBW1 653 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 PIGVQ9NUD9 493 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 NUDT5Q9UKK9 219 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 EFR3BQ9Y2G0 817 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 A0A087WUV0 522 aaPredicted RBP9.14□□□□□ -0.95
SNCA-206ENST00000420646 B4GALT3O60512 393 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 ADAMTS4O75173 837 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 AP1G2O75843 785 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 ZBED1O96006 694 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 TAOK1Q7L7X3 1001 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 PALM2Q8IXS6 379 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 TTC39CQ8N584 583 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 CFAP36Q96G28 342 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 CABS1Q96KC9 395 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 TNIP3Q96KP6 325 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 SMOQ99835 787 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 TRPV6Q9H1D0 765 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 ETNK1Q9HBU6 452 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 ALG13Q9NP73 1137 aaKnown RBP9.14□□□□□ -0.95
SNCA-206ENST00000420646 EURLQ9NYK6 297 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.14□□□□□ -0.95
SNCA-206ENST00000420646 RABGEF1Q9UJ41 708 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 SHOC2Q9UQ13 582 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 NOD1Q9Y239 953 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 SEPT4O43236 478 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 F7P08709 466 aaPredicted RBP9.14□□□□□ -0.95
SNCA-206ENST00000420646 OR4Q2P0C623 313 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 RPA3P35244 121 aaPredicted RBP9.14□□□□□ -0.95
SNCA-206ENST00000420646 PNPLA4P41247 253 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 PGFP49763 221 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 FCGRTP55899 365 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 ARL4CP56559 192 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 CORO7P57737 925 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 YWHAZP63104 245 aaKnown RBP9.14□□□□□ -0.95
SNCA-206ENST00000420646 BSPRYQ5W0U4 402 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 FAM47EQ6ZV65 393 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 SIX6OS1Q8N1H7 587 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 MPP5Q8N3R9 675 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 SCAMP5Q8TAC9 235 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 SLC7A14Q8TBB6 771 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 CCHCR1Q8TD31 782 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 HNRNPABQ99729 332 aaKnown RBP9.14□□□□□ -0.95
SNCA-206ENST00000420646 TSPYL1Q9H0U9 437 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 TMLHEQ9NVH6 421 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 SEPT10Q9P0V9 454 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 GRID1Q9ULK0 1009 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 MAGED2Q9UNF1 606 aaPredicted RBP9.14□□□□□ -0.95
SNCA-206ENST00000420646 Q9Y3F1 56 aa9.14□□□□□ -0.95
SNCA-206ENST00000420646 WDR91A4D1P6 747 aa9.13□□□□□ -0.95
SNCA-206ENST00000420646 KBTBD13C9JR72 458 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms