RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 PARS2Q7L3T8 475 aaKnown RBP4.12□□□□□ -1.75
CNGA1-203ENST00000420489 PHACTR4Q8IZ21 702 aa4.12□□□□□ -1.75
CNGA1-203ENST00000420489 EXTL1Q92935 676 aa4.12□□□□□ -1.75
CNGA1-203ENST00000420489 PRR11Q96HE9 360 aaPredicted RBP4.12□□□□□ -1.75
CNGA1-203ENST00000420489 NRDE2Q9H7Z3 1164 aa4.12□□□□□ -1.75
CNGA1-203ENST00000420489 TUBE1Q9UJT0 475 aa4.12□□□□□ -1.75
CNGA1-203ENST00000420489 ITGB1BP2Q9UKP3 347 aa4.12□□□□□ -1.75
CNGA1-203ENST00000420489 NUB1Q9Y5A7 615 aa4.12□□□□□ -1.75
CNGA1-203ENST00000420489 HELZP42694 1942 aaKnown RBP4.12□□□□□ -1.75
CNGA1-203ENST00000420489 USP9YO00507 2555 aaPredicted RBP4.12□□□□□ -1.75
CNGA1-203ENST00000420489 A0A1B0GTQ1 180 aa4.12□□□□□ -1.75
CNGA1-203ENST00000420489 ARHGAP10A1A4S6 786 aa4.12□□□□□ -1.75
CNGA1-203ENST00000420489 A1L4Q6 167 aa4.12□□□□□ -1.75
CNGA1-203ENST00000420489 FAM149AA5PLN7 773 aa4.12□□□□□ -1.75
CNGA1-203ENST00000420489 ADAMTS3O15072 1205 aa4.12□□□□□ -1.75
CNGA1-203ENST00000420489 TCEA3O75764 348 aa4.12□□□□□ -1.75
CNGA1-203ENST00000420489 LPOP22079 712 aaPredicted RBP4.12□□□□□ -1.75
CNGA1-203ENST00000420489 TNFRSF4P43489 277 aa4.12□□□□□ -1.75
CNGA1-203ENST00000420489 MYO1EQ12965 1108 aa4.12□□□□□ -1.75
CNGA1-203ENST00000420489 ZNF630Q2M218 657 aaPredicted RBP4.12□□□□□ -1.75
CNGA1-203ENST00000420489 HLA-BQ31612 363 aa4.12□□□□□ -1.75
CNGA1-203ENST00000420489 METTL7BQ6UX53 244 aa4.12□□□□□ -1.75
CNGA1-203ENST00000420489 NCCRP1Q6ZVX7 275 aaPredicted RBP4.12□□□□□ -1.75
CNGA1-203ENST00000420489 REC114Q7Z4M0 266 aa4.12□□□□□ -1.75
CNGA1-203ENST00000420489 MRPL10Q7Z7H8 261 aaKnown RBP4.12□□□□□ -1.75
CNGA1-203ENST00000420489 CCDC146Q8IYE0 955 aa4.12□□□□□ -1.75
CNGA1-203ENST00000420489 TSPYL6Q8N831 410 aa4.12□□□□□ -1.75
CNGA1-203ENST00000420489 SKA1Q96BD8 255 aa4.12□□□□□ -1.75
CNGA1-203ENST00000420489 SPATA33Q96N06 139 aa4.12□□□□□ -1.75
CNGA1-203ENST00000420489 RAI14Q9P0K7 980 aa4.12□□□□□ -1.75
CNGA1-203ENST00000420489 GMIPQ9P107 970 aa4.12□□□□□ -1.75
CNGA1-203ENST00000420489 NKX1-2Q9UD57 310 aaPredicted RBP4.12□□□□□ -1.75
CNGA1-203ENST00000420489 FRMD4BQ9Y2L6 1034 aa4.12□□□□□ -1.75
CNGA1-203ENST00000420489 HEPACAM2A8MVW5 462 aa4.11□□□□□ -1.75
CNGA1-203ENST00000420489 DCLK1O15075 740 aa4.11□□□□□ -1.75
CNGA1-203ENST00000420489 KCNAB3O43448 404 aa4.11□□□□□ -1.75
CNGA1-203ENST00000420489 RFPL2O75678 378 aa4.11□□□□□ -1.75
CNGA1-203ENST00000420489 SORBS2O94875 1100 aaKnown RBP4.11□□□□□ -1.75
CNGA1-203ENST00000420489 RXRGP48443 463 aa4.11□□□□□ -1.75
CNGA1-203ENST00000420489 NT5C2P49902 561 aa4.11□□□□□ -1.75
CNGA1-203ENST00000420489 ZNF165P49910 485 aa4.11□□□□□ -1.75
CNGA1-203ENST00000420489 ART1P52961 327 aa4.11□□□□□ -1.75
CNGA1-203ENST00000420489 GRM4Q14833 912 aa4.11□□□□□ -1.75
CNGA1-203ENST00000420489 L1TD1Q5T7N2 865 aaKnown RBP4.11□□□□□ -1.75
CNGA1-203ENST00000420489 CENPQQ7L2Z9 268 aaPredicted RBP4.11□□□□□ -1.75
CNGA1-203ENST00000420489 WDR36Q8NI36 951 aaKnown RBP4.11□□□□□ -1.75
CNGA1-203ENST00000420489 CLEC4DQ8WXI8 215 aa4.11□□□□□ -1.75
CNGA1-203ENST00000420489 CD101Q93033 1021 aa4.11□□□□□ -1.75
CNGA1-203ENST00000420489 BICC1Q9H694 974 aaKnown RBP4.11□□□□□ -1.75
CNGA1-203ENST00000420489 CRTAC1Q9NQ79 661 aa4.11□□□□□ -1.75
CNGA1-203ENST00000420489 G3BP2Q9UN86 482 aaKnown RBP4.11□□□□□ -1.75
CNGA1-203ENST00000420489 DSPP15924 2871 aaKnown RBP4.11□□□□□ -1.75
CNGA1-203ENST00000420489 ASXL3Q9C0F0 2248 aa4.11□□□□□ -1.75
CNGA1-203ENST00000420489 A0A1B0GUH1 482 aa4.11□□□□□ -1.75
CNGA1-203ENST00000420489 ABLIM1O14639 778 aa4.11□□□□□ -1.75
CNGA1-203ENST00000420489 MGEA5O60502 916 aa4.11□□□□□ -1.75
CNGA1-203ENST00000420489 APPP05067 770 aa4.11□□□□□ -1.75
CNGA1-203ENST00000420489 RHOP08100 348 aa4.11□□□□□ -1.75
CNGA1-203ENST00000420489 ZNF286BP0CG31 522 aa4.11□□□□□ -1.75
CNGA1-203ENST00000420489 RNF224P0DH78 156 aa4.11□□□□□ -1.75
CNGA1-203ENST00000420489 IMPDH2P12268 514 aa4.11□□□□□ -1.75
CNGA1-203ENST00000420489 ZSCAN20P17040 1043 aaPredicted RBP4.11□□□□□ -1.75
CNGA1-203ENST00000420489 SLC11A1P49279 550 aa4.11□□□□□ -1.75
CNGA1-203ENST00000420489 METAP2P50579 478 aaKnown RBP eCLIP4.11□□□□□ -1.75
CNGA1-203ENST00000420489 HK2P52789 917 aa4.11□□□□□ -1.75
CNGA1-203ENST00000420489 PCBP3P57721 371 aaKnown RBP4.11□□□□□ -1.75
CNGA1-203ENST00000420489 ZNF124Q15973 351 aa4.11□□□□□ -1.75
CNGA1-203ENST00000420489 CRY1Q16526 586 aa4.11□□□□□ -1.75
CNGA1-203ENST00000420489 JAKMIP3Q5VZ66 844 aa4.11□□□□□ -1.75
CNGA1-203ENST00000420489 TSHZ3Q63HK5 1081 aa4.11□□□□□ -1.75
CNGA1-203ENST00000420489 GLB1LQ6UWU2 654 aa4.11□□□□□ -1.75
CNGA1-203ENST00000420489 HS2ST1Q7LGA3 356 aa4.11□□□□□ -1.75
CNGA1-203ENST00000420489 TMEM173Q86WV6 379 aaPredicted RBP4.11□□□□□ -1.75
CNGA1-203ENST00000420489 TMEM151BQ8IW70 566 aa4.11□□□□□ -1.75
CNGA1-203ENST00000420489 CPXCR1Q8N123 301 aa4.11□□□□□ -1.75
CNGA1-203ENST00000420489 CPA6Q8N4T0 437 aa4.11□□□□□ -1.75
CNGA1-203ENST00000420489 ZNF655Q8N720 491 aaPredicted RBP4.11□□□□□ -1.75
CNGA1-203ENST00000420489 Q8NA96 180 aa4.11□□□□□ -1.75
CNGA1-203ENST00000420489 GOLM1Q8NBJ4 401 aa4.11□□□□□ -1.75
CNGA1-203ENST00000420489 ZNF830Q96NB3 372 aaPredicted RBP4.11□□□□□ -1.75
CNGA1-203ENST00000420489 DPH2Q9BQC3 489 aaPredicted RBP4.11□□□□□ -1.75
CNGA1-203ENST00000420489 HSFX1Q9UBD0 423 aa4.11□□□□□ -1.75
CNGA1-203ENST00000420489 KCTD3Q9Y597 815 aa4.11□□□□□ -1.75
CNGA1-203ENST00000420489 COL27A1Q8IZC6 1860 aaPredicted RBP4.11□□□□□ -1.75
CNGA1-203ENST00000420489 APC2O95996 2303 aa4.11□□□□□ -1.75
CNGA1-203ENST00000420489 IGHV1OR15-9A0A0B4J2B8 117 aa4.1□□□□□ -1.75
CNGA1-203ENST00000420489 A0A1W2PQ27 194 aa4.1□□□□□ -1.75
CNGA1-203ENST00000420489 A0A1W2PQ64 194 aa4.1□□□□□ -1.75
CNGA1-203ENST00000420489 A0A1W2PQC6 194 aa4.1□□□□□ -1.75
CNGA1-203ENST00000420489 ZNF891A8MT65 544 aaPredicted RBP4.1□□□□□ -1.75
CNGA1-203ENST00000420489 NVLO15381 856 aaKnown RBP4.1□□□□□ -1.75
CNGA1-203ENST00000420489 KCNN4O15554 427 aa4.1□□□□□ -1.75
CNGA1-203ENST00000420489 CSPG5O95196 566 aa4.1□□□□□ -1.75
CNGA1-203ENST00000420489 ZRANB2O95218 330 aaKnown RBP eCLIP4.1□□□□□ -1.75
CNGA1-203ENST00000420489 GARTP22102 1010 aa4.1□□□□□ -1.75
CNGA1-203ENST00000420489 PPFIA1Q13136 1202 aa4.1□□□□□ -1.75
CNGA1-203ENST00000420489 BIRC2Q13490 618 aa4.1□□□□□ -1.75
CNGA1-203ENST00000420489 TCEAL1Q15170 157 aa4.1□□□□□ -1.75
CNGA1-203ENST00000420489 TWISTNBQ3B726 338 aaPredicted RBP4.1□□□□□ -1.75
CNGA1-203ENST00000420489 SDE2Q6IQ49 451 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms