RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 CCDC151A5D8V7 595 aa17.68■□□□□ 0.42
CALD1-204ENST00000417172 I6L893 689 aaPredicted RBP17.68■□□□□ 0.42
CALD1-204ENST00000417172 TRIM66O15016 1216 aa17.68■□□□□ 0.42
CALD1-204ENST00000417172 CST8O60676 142 aa17.68■□□□□ 0.42
CALD1-204ENST00000417172 ENDOD1O94919 500 aa17.68■□□□□ 0.42
CALD1-204ENST00000417172 TJP3O95049 919 aa17.68■□□□□ 0.42
CALD1-204ENST00000417172 CSPG5O95196 566 aa17.68■□□□□ 0.42
CALD1-204ENST00000417172 DESP17661 470 aa17.68■□□□□ 0.42
CALD1-204ENST00000417172 IL4RP24394 825 aa17.68■□□□□ 0.42
CALD1-204ENST00000417172 CETN2P41208 172 aa17.68■□□□□ 0.42
CALD1-204ENST00000417172 MAGEA11P43364 429 aa17.68■□□□□ 0.42
CALD1-204ENST00000417172 YWHAGP61981 247 aaKnown RBP eCLIP17.68■□□□□ 0.42
CALD1-204ENST00000417172 DEUP1Q05D60 604 aa17.68■□□□□ 0.42
CALD1-204ENST00000417172 KRT81Q14533 505 aa17.68■□□□□ 0.42
CALD1-204ENST00000417172 ERMARDQ5T6L9 678 aa17.68■□□□□ 0.42
CALD1-204ENST00000417172 SLC8B1Q6J4K2 584 aa17.68■□□□□ 0.42
CALD1-204ENST00000417172 CCNI2Q6ZMN8 369 aaPredicted RBP17.68■□□□□ 0.42
CALD1-204ENST00000417172 RFX6Q8HWS3 928 aa17.68■□□□□ 0.42
CALD1-204ENST00000417172 NUP93Q8N1F7 819 aa17.68■□□□□ 0.42
CALD1-204ENST00000417172 CCDC26Q8TAB7 109 aa17.68■□□□□ 0.42
CALD1-204ENST00000417172 GIPC2Q8TF65 315 aa17.68■□□□□ 0.42
CALD1-204ENST00000417172 IFT81Q8WYA0 676 aa17.68■□□□□ 0.42
CALD1-204ENST00000417172 IRGQQ8WZA9 623 aa17.68■□□□□ 0.42
CALD1-204ENST00000417172 DPH5Q9H2P9 285 aa17.68■□□□□ 0.42
CALD1-204ENST00000417172 GDF3Q9NR23 364 aa17.68■□□□□ 0.42
CALD1-204ENST00000417172 ARGLU1Q9NWB6 273 aaPredicted RBP17.68■□□□□ 0.42
CALD1-204ENST00000417172 PCYOX1Q9UHG3 505 aa17.68■□□□□ 0.42
CALD1-204ENST00000417172 A0A1W2PQH9 124 aa17.68■□□□□ 0.42
CALD1-204ENST00000417172 HAPLN1P10915 354 aaPredicted RBP17.68■□□□□ 0.42
CALD1-204ENST00000417172 ATF6P18850 670 aa17.68■□□□□ 0.42
CALD1-204ENST00000417172 RDXP35241 583 aaKnown RBP17.68■□□□□ 0.42
CALD1-204ENST00000417172 GLUD2P49448 558 aa17.68■□□□□ 0.42
CALD1-204ENST00000417172 HTRA4P83105 476 aaPredicted RBP17.68■□□□□ 0.42
CALD1-204ENST00000417172 DSG1Q02413 1049 aa17.68■□□□□ 0.42
CALD1-204ENST00000417172 BRD3Q15059 726 aa17.68■□□□□ 0.42
CALD1-204ENST00000417172 BOLA3Q53S33 107 aa17.68■□□□□ 0.42
CALD1-204ENST00000417172 NPNTQ6UXI9 565 aa17.68■□□□□ 0.42
CALD1-204ENST00000417172 PRUNE1Q86TP1 453 aa17.68■□□□□ 0.42
CALD1-204ENST00000417172 TAC4Q86UU9 113 aa17.68■□□□□ 0.42
CALD1-204ENST00000417172 VPS52Q8N1B4 723 aa17.68■□□□□ 0.42
CALD1-204ENST00000417172 SPPL2BQ8TCT7 592 aa17.68■□□□□ 0.42
CALD1-204ENST00000417172 TEKT4Q8WW24 435 aa17.68■□□□□ 0.42
CALD1-204ENST00000417172 KCTD15Q96SI1 283 aaPredicted RBP17.68■□□□□ 0.42
CALD1-204ENST00000417172 WDR6Q9NNW5 1121 aaKnown RBP17.68■□□□□ 0.42
CALD1-204ENST00000417172 DDIT4Q9NX09 232 aa17.68■□□□□ 0.42
CALD1-204ENST00000417172 MTMR10Q9NXD2 777 aa17.68■□□□□ 0.42
CALD1-204ENST00000417172 DNPEPQ9ULA0 475 aa17.68■□□□□ 0.42
CALD1-204ENST00000417172 MDM4O15151 490 aa17.67■□□□□ 0.42
CALD1-204ENST00000417172 SEC24AO95486 1093 aa17.67■□□□□ 0.42
CALD1-204ENST00000417172 PECAM1P16284 738 aaPredicted RBP17.67■□□□□ 0.42
CALD1-204ENST00000417172 L1CAMP32004 1257 aa17.67■□□□□ 0.42
CALD1-204ENST00000417172 MAATS1Q7Z4T9 603 aa17.67■□□□□ 0.42
CALD1-204ENST00000417172 SPRED2Q7Z698 418 aa17.67■□□□□ 0.42
CALD1-204ENST00000417172 SCML4Q8N228 414 aa17.67■□□□□ 0.42
CALD1-204ENST00000417172 MAIP1Q8WWC4 291 aa17.67■□□□□ 0.42
CALD1-204ENST00000417172 ZBTB9Q96C00 473 aa17.67■□□□□ 0.42
CALD1-204ENST00000417172 HERC2P3Q9BVR0 1158 aa17.67■□□□□ 0.42
CALD1-204ENST00000417172 C10orf88Q9H8K7 445 aa17.67■□□□□ 0.42
CALD1-204ENST00000417172 FAM204AQ9H8W3 233 aa17.67■□□□□ 0.42
CALD1-204ENST00000417172 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.67■□□□□ 0.42
CALD1-204ENST00000417172 GMIPQ9P107 970 aa17.67■□□□□ 0.42
CALD1-204ENST00000417172 FZD10Q9ULW2 581 aa17.67■□□□□ 0.42
CALD1-204ENST00000417172 NFU1Q9UMS0 254 aa17.67■□□□□ 0.42
CALD1-204ENST00000417172 BACE2Q9Y5Z0 518 aa17.67■□□□□ 0.42
CALD1-204ENST00000417172 GBF1Q92538 1859 aa17.67■□□□□ 0.42
CALD1-204ENST00000417172 BHMG1C9JSJ3 638 aaPredicted RBP17.66■□□□□ 0.42
CALD1-204ENST00000417172 DAPK3O43293 454 aa17.66■□□□□ 0.42
CALD1-204ENST00000417172 FNTAP49354 379 aa17.66■□□□□ 0.42
CALD1-204ENST00000417172 FAM182AQ5T1J6 154 aa17.66■□□□□ 0.42
CALD1-204ENST00000417172 B4GALNT4Q76KP1 1039 aa17.66■□□□□ 0.42
CALD1-204ENST00000417172 DDX53Q86TM3 631 aaKnown RBP17.66■□□□□ 0.42
CALD1-204ENST00000417172 FIBCD1Q8N539 461 aa17.66■□□□□ 0.42
CALD1-204ENST00000417172 DQX1Q8TE96 717 aaKnown RBP17.66■□□□□ 0.42
CALD1-204ENST00000417172 CCDC114Q96M63 670 aa17.66■□□□□ 0.42
CALD1-204ENST00000417172 CHD9Q3L8U1 2897 aa17.66■□□□□ 0.42
CALD1-204ENST00000417172 MSI1O43347 362 aaKnown RBP17.66■□□□□ 0.42
CALD1-204ENST00000417172 LIASO43766 372 aa17.66■□□□□ 0.42
CALD1-204ENST00000417172 FGF18O76093 207 aa17.66■□□□□ 0.42
CALD1-204ENST00000417172 OTUD4Q01804 1114 aaKnown RBP17.66■□□□□ 0.42
CALD1-204ENST00000417172 DHX34Q14147 1143 aaKnown RBP17.66■□□□□ 0.42
CALD1-204ENST00000417172 TRIP13Q15645 432 aaPredicted RBP17.66■□□□□ 0.42
CALD1-204ENST00000417172 DPYSL2Q16555 572 aa17.66■□□□□ 0.42
CALD1-204ENST00000417172 BEND6Q5SZJ8 279 aaPredicted RBP17.66■□□□□ 0.42
CALD1-204ENST00000417172 PSRC1Q6PGN9 363 aaPredicted RBP17.66■□□□□ 0.42
CALD1-204ENST00000417172 TMCO3Q6UWJ1 677 aa17.66■□□□□ 0.42
CALD1-204ENST00000417172 BBS12Q6ZW61 710 aa17.66■□□□□ 0.42
CALD1-204ENST00000417172 HERC6Q8IVU3 1022 aa17.66■□□□□ 0.42
CALD1-204ENST00000417172 IFT20Q8IY31 132 aa17.66■□□□□ 0.42
CALD1-204ENST00000417172 PCDH19Q8TAB3 1148 aa17.66■□□□□ 0.42
CALD1-204ENST00000417172 NEUROG2Q9H2A3 272 aa17.66■□□□□ 0.42
CALD1-204ENST00000417172 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.66■□□□□ 0.42
CALD1-204ENST00000417172 SFMBT1Q9UHJ3 866 aa17.66■□□□□ 0.42
CALD1-204ENST00000417172 SCML2Q9UQR0 700 aa17.66■□□□□ 0.42
CALD1-204ENST00000417172 MFHAS1Q9Y4C4 1052 aa17.66■□□□□ 0.42
CALD1-204ENST00000417172 MAP3K6O95382 1288 aa17.65■□□□□ 0.42
CALD1-204ENST00000417172 GGCXP38435 758 aa17.65■□□□□ 0.42
CALD1-204ENST00000417172 KRT17Q04695 432 aa17.65■□□□□ 0.42
CALD1-204ENST00000417172 CCNG2Q16589 344 aa17.65■□□□□ 0.42
CALD1-204ENST00000417172 ANKRD20A8PQ5CZ79 823 aa17.65■□□□□ 0.42
CALD1-204ENST00000417172 BTBD8Q5XKL5 378 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms