RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 SH2D4AQ9H788 454 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 C8orf33Q9H7E9 229 aaPredicted RBP3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 MMRN2Q9H8L6 949 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 G6PC2Q9NQR9 355 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 MBNL1Q9NR56 388 aaKnown RBP3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 IARS2Q9NSE4 1012 aaKnown RBP3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 STK32BQ9NY57 414 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 IL1RAPL1Q9NZN1 696 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 TMOD2Q9NZR1 351 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 FETUBQ9UGM5 382 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 LIMA1Q9UHB6 759 aaKnown RBP3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 HCN2Q9UL51 889 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 HSF4Q9ULV5 492 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 RPH3AQ9Y2J0 694 aaPredicted RBP3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 TRPV2Q9Y5S1 764 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 NUMBLQ9Y6R0 609 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 V9GYY5 206 aaPredicted RBP3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 KDRP35968 1356 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 GAKO14976 1311 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 TTC41PQ6P2S7 1318 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 SALL3Q9BXA9 1300 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 ZNF335Q9H4Z2 1342 aaPredicted RBP3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 EME2A4GXA9 379 aaPredicted RBP3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 C2orf71A6NGG8 1288 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 SLC9B1P1A6NJY1 282 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 ACOD1A6NK06 481 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 LIPT2A6NK58 231 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 EFCAB8A8MWE9 144 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 E9PBE3 544 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 VWA5AO00534 786 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 TNPO2O14787 897 aaKnown RBP3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 MAPK13O15264 365 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 BCAT2O15382 392 aaPredicted RBP3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 KLK10O43240 276 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 HNRNPRO43390 633 aaKnown RBP3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 SMAD6O43541 496 aaKnown RBP3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 DYRK3O43781 588 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 NUDT21O43809 227 aaKnown RBP3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 TLR2O60603 784 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 CYTIPO60759 359 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 DIAPH2O60879 1101 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 RNGTTO60942 597 aaKnown RBP3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 TULP3O75386 442 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 RECQL5O94762 991 aaPredicted RBP3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 ALDH1A2O94788 518 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 IPO13O94829 963 aaKnown RBP3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 ALPPP05187 535 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 RB1P06400 928 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 ANXA6P08133 673 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 INHBAP08476 426 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 SUPT20HL2P0C7V6 817 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 PRR35P0CG20 571 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 ALPPL2P10696 532 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 GNAT1P11488 350 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 SRCP12931 536 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 LCP1P13796 627 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 CCDC130P13994 396 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 CPA1P15085 419 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 GSPT1P15170 499 aaKnown RBP3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 ZNF3P17036 446 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 EGR1P18146 543 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 TCEA1P23193 301 aaKnown RBP3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 CORO1AP31146 461 aaKnown RBP3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 IDUAP35475 653 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 GPD2P43304 727 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 BAG6P46379 1132 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 RABIFP47224 123 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 GCLCP48506 637 aaPredicted RBP3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 RBM5P52756 815 aaKnown RBP eCLIP3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 MRPL12P52815 198 aaKnown RBP3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 CAPZA1P52907 286 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 PNLIPRP1P54315 467 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 CASP9P55211 416 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 JAM2P57087 298 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 RPL7AP62424 266 aaKnown RBP3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 CTAG1AP78358 180 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 GPLD1P80108 840 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 ATP11AP98196 1134 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 ATP8B2P98198 1209 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 CD83Q01151 205 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 ACY1Q03154 408 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 CYP4F3Q08477 520 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 SPIRE1Q08AE8 756 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 NFIAQ12857 509 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 RAB32Q13637 225 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 IL10RAQ13651 578 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 THOC5Q13769 683 aaKnown RBP3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 IDI1Q13907 227 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 DOC2AQ14183 400 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 GAS6Q14393 721 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 EFTUD2Q15029 972 aaKnown RBP eCLIP3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 TBCCQ15814 346 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 AAK1Q2M2I8 961 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 FUT11Q495W5 492 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 CRY2Q49AN0 593 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 ANKRD20A4Q4UJ75 823 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 ANKRD20A8PQ5CZ79 823 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 ANKRD20A2Q5SQ80 823 aa3.28□□□□□ -1.88
CTDSPL-203ENST00000416688 SH2D4BQ5SQS7 431 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms