RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	CPLX1	O14810	134 aa		9.25	□□□□□ -0.93
NIF3L1-206	ENST00000416651	FLRT2	O43155	660 aa		9.25	□□□□□ -0.93
NIF3L1-206	ENST00000416651	TNFSF14	O43557	240 aa		9.25	□□□□□ -0.93
NIF3L1-206	ENST00000416651	ZNF883	P0CG24	379 aa		9.25	□□□□□ -0.93
NIF3L1-206	ENST00000416651	ADH5	P11766	374 aa		9.25	□□□□□ -0.93
NIF3L1-206	ENST00000416651	C6	P13671	934 aa		9.25	□□□□□ -0.93
NIF3L1-206	ENST00000416651	JUP	P14923	745 aa		9.25	□□□□□ -0.93
NIF3L1-206	ENST00000416651	NTSR1	P30989	418 aa		9.25	□□□□□ -0.93
NIF3L1-206	ENST00000416651	MAP2K3	P46734	347 aa		9.25	□□□□□ -0.93
NIF3L1-206	ENST00000416651	KCNB1	Q14721	858 aa		9.25	□□□□□ -0.93
NIF3L1-206	ENST00000416651	KIAA1614	Q5VZ46	1190 aa		9.25	□□□□□ -0.93
NIF3L1-206	ENST00000416651	SLC39A4	Q6P5W5	647 aa		9.25	□□□□□ -0.93
NIF3L1-206	ENST00000416651	TMEM25	Q86YD3	366 aa		9.25	□□□□□ -0.93
NIF3L1-206	ENST00000416651	TMEM161B	Q8NDZ6	487 aa		9.25	□□□□□ -0.93
NIF3L1-206	ENST00000416651	CCDC26	Q8TAB7	109 aa		9.25	□□□□□ -0.93
NIF3L1-206	ENST00000416651	NXPE2	Q96DL1	559 aa		9.25	□□□□□ -0.93
NIF3L1-206	ENST00000416651	TRMT2B	Q96GJ1	504 aa	Known RBP	9.25	□□□□□ -0.93
NIF3L1-206	ENST00000416651	CDC6	Q99741	560 aa		9.25	□□□□□ -0.93
NIF3L1-206	ENST00000416651	NUCKS1	Q9H1E3	243 aa	Known RBP	9.25	□□□□□ -0.93
NIF3L1-206	ENST00000416651	ZMYM5	Q9UJ78	669 aa		9.25	□□□□□ -0.93
NIF3L1-206	ENST00000416651	BCAT2	O15382	392 aa	Predicted RBP	9.24	□□□□□ -0.93
NIF3L1-206	ENST00000416651	RRP8	O43159	456 aa	Known RBP	9.24	□□□□□ -0.93
NIF3L1-206	ENST00000416651	ADRB2	P07550	413 aa		9.24	□□□□□ -0.93
NIF3L1-206	ENST00000416651	CLTA	P09496	248 aa		9.24	□□□□□ -0.93
NIF3L1-206	ENST00000416651	MAPT	P10636	758 aa	Known RBP	9.24	□□□□□ -0.93
NIF3L1-206	ENST00000416651	GNS	P15586	552 aa		9.24	□□□□□ -0.93
NIF3L1-206	ENST00000416651	CDC25A	P30304	524 aa		9.24	□□□□□ -0.93
NIF3L1-206	ENST00000416651	KRT2	P35908	639 aa		9.24	□□□□□ -0.93
NIF3L1-206	ENST00000416651	GRIK1	P39086	918 aa		9.24	□□□□□ -0.93
NIF3L1-206	ENST00000416651	CCT6A	P40227	531 aa	Known RBP	9.24	□□□□□ -0.93
NIF3L1-206	ENST00000416651	MATR3	P43243	847 aa	Known RBP eCLIP	9.24	□□□□□ -0.93
NIF3L1-206	ENST00000416651	PPP2R3A	Q06190	1150 aa		9.24	□□□□□ -0.93
NIF3L1-206	ENST00000416651	PDIA5	Q14554	519 aa		9.24	□□□□□ -0.93
NIF3L1-206	ENST00000416651	ZNF174	Q15697	407 aa		9.24	□□□□□ -0.93
NIF3L1-206	ENST00000416651	HSF5	Q4G112	596 aa	Predicted RBP	9.24	□□□□□ -0.93
NIF3L1-206	ENST00000416651	WDR45B	Q5MNZ6	344 aa		9.24	□□□□□ -0.93
NIF3L1-206	ENST00000416651	SYCP2L	Q5T4T6	812 aa		9.24	□□□□□ -0.93
NIF3L1-206	ENST00000416651	HES3	Q5TGS1	186 aa		9.24	□□□□□ -0.93
NIF3L1-206	ENST00000416651	C2orf15	Q8WU43	125 aa	Known RBP	9.24	□□□□□ -0.93
NIF3L1-206	ENST00000416651	NAP1L4	Q99733	375 aa	Known RBP	9.24	□□□□□ -0.93
NIF3L1-206	ENST00000416651	ZDHHC5	Q9C0B5	715 aa		9.24	□□□□□ -0.93
NIF3L1-206	ENST00000416651	MKRN2	Q9H000	416 aa	Known RBP	9.24	□□□□□ -0.93
NIF3L1-206	ENST00000416651	CAAP1	Q9H8G2	361 aa		9.24	□□□□□ -0.93
NIF3L1-206	ENST00000416651	PLEKHA5	Q9HAU0	1116 aa		9.24	□□□□□ -0.93
NIF3L1-206	ENST00000416651	DDX19A	Q9NUU7	478 aa	Known RBP	9.24	□□□□□ -0.93
NIF3L1-206	ENST00000416651	TMEM30A	Q9NV96	361 aa		9.24	□□□□□ -0.93
NIF3L1-206	ENST00000416651	SUSD2	Q9UGT4	822 aa		9.24	□□□□□ -0.93
NIF3L1-206	ENST00000416651	IL17B	Q9UHF5	180 aa		9.24	□□□□□ -0.93
NIF3L1-206	ENST00000416651	L1RE1	Q9UN81	338 aa		9.24	□□□□□ -0.93
NIF3L1-206	ENST00000416651	METTL12	A8MUP2	240 aa		9.23	□□□□□ -0.93
NIF3L1-206	ENST00000416651	CLDN3	O15551	220 aa		9.23	□□□□□ -0.93
NIF3L1-206	ENST00000416651	CER1	O95813	267 aa		9.23	□□□□□ -0.93
NIF3L1-206	ENST00000416651	ABL1	P00519	1130 aa		9.23	□□□□□ -0.93
NIF3L1-206	ENST00000416651	CD6	P30203	668 aa		9.23	□□□□□ -0.93
NIF3L1-206	ENST00000416651	IL12RB1	P42701	662 aa		9.23	□□□□□ -0.93
NIF3L1-206	ENST00000416651	CACNA2D1	P54289	1103 aa		9.23	□□□□□ -0.93
NIF3L1-206	ENST00000416651	AAMP	Q13685	434 aa		9.23	□□□□□ -0.93
NIF3L1-206	ENST00000416651	RTP5	Q14D33	572 aa		9.23	□□□□□ -0.93
NIF3L1-206	ENST00000416651	SF3A1	Q15459	793 aa	Known RBP	9.23	□□□□□ -0.93
NIF3L1-206	ENST00000416651	RINT1	Q6NUQ1	792 aa		9.23	□□□□□ -0.93
NIF3L1-206	ENST00000416651	C1orf229	Q6ZS94	237 aa	Predicted RBP	9.23	□□□□□ -0.93
NIF3L1-206	ENST00000416651	C1orf186	Q6ZWK4	172 aa		9.23	□□□□□ -0.93
NIF3L1-206	ENST00000416651	FAM124A	Q86V42	546 aa		9.23	□□□□□ -0.93
NIF3L1-206	ENST00000416651	TMPRSS12	Q86WS5	348 aa		9.23	□□□□□ -0.93
NIF3L1-206	ENST00000416651	METTL23	Q86XA0	190 aa		9.23	□□□□□ -0.93
NIF3L1-206	ENST00000416651	BBS7	Q8IWZ6	715 aa		9.23	□□□□□ -0.93
NIF3L1-206	ENST00000416651	CHPF	Q8IZ52	775 aa		9.23	□□□□□ -0.93
NIF3L1-206	ENST00000416651	DCP1B	Q8IZD4	617 aa	Known RBP	9.23	□□□□□ -0.93
NIF3L1-206	ENST00000416651	THEM5	Q8N1Q8	247 aa		9.23	□□□□□ -0.93
NIF3L1-206	ENST00000416651	PDCL2	Q8N4E4	241 aa		9.23	□□□□□ -0.93
NIF3L1-206	ENST00000416651	EXD3	Q8N9H8	876 aa		9.23	□□□□□ -0.93
NIF3L1-206	ENST00000416651	TERB1	Q8NA31	727 aa		9.23	□□□□□ -0.93
NIF3L1-206	ENST00000416651	ZSWIM2	Q8NEG5	633 aa		9.23	□□□□□ -0.93
NIF3L1-206	ENST00000416651	FGF11	Q92914	225 aa		9.23	□□□□□ -0.93
NIF3L1-206	ENST00000416651	TMEM176A	Q96HP8	235 aa		9.23	□□□□□ -0.93
NIF3L1-206	ENST00000416651	GABRG3	Q99928	467 aa		9.23	□□□□□ -0.93
NIF3L1-206	ENST00000416651	C6orf106	Q9H6K1	298 aa	Predicted RBP	9.23	□□□□□ -0.93
NIF3L1-206	ENST00000416651	NOTCH2	Q04721	2471 aa		9.23	□□□□□ -0.93
NIF3L1-206	ENST00000416651	SPTAN1	Q13813	2472 aa	Known RBP	9.22	□□□□□ -0.93
NIF3L1-206	ENST00000416651	ZNF840P	A6NDX5	716 aa		9.22	□□□□□ -0.93
NIF3L1-206	ENST00000416651	ANKRD63	C9JTQ0	380 aa		9.22	□□□□□ -0.93
NIF3L1-206	ENST00000416651	ZNF217	O75362	1048 aa		9.22	□□□□□ -0.93
NIF3L1-206	ENST00000416651	OLFM2	O95897	454 aa		9.22	□□□□□ -0.93
NIF3L1-206	ENST00000416651	ADSS	P30520	456 aa		9.22	□□□□□ -0.93
NIF3L1-206	ENST00000416651	EIF2D	P41214	584 aa	Known RBP	9.22	□□□□□ -0.93
NIF3L1-206	ENST00000416651	ACOT2	P49753	483 aa		9.22	□□□□□ -0.93
NIF3L1-206	ENST00000416651	PGF	P49763	221 aa		9.22	□□□□□ -0.93
NIF3L1-206	ENST00000416651	TAF6	P49848	677 aa		9.22	□□□□□ -0.93
NIF3L1-206	ENST00000416651	CSRP3	P50461	194 aa		9.22	□□□□□ -0.93
NIF3L1-206	ENST00000416651	PSMC1	P62191	440 aa	Known RBP	9.22	□□□□□ -0.93
NIF3L1-206	ENST00000416651	IRX6	P78412	446 aa	Predicted RBP	9.22	□□□□□ -0.93
NIF3L1-206	ENST00000416651	SLC7A9	P82251	487 aa		9.22	□□□□□ -0.93
NIF3L1-206	ENST00000416651	SHB	Q15464	509 aa		9.22	□□□□□ -0.93
NIF3L1-206	ENST00000416651	FUT11	Q495W5	492 aa		9.22	□□□□□ -0.93
NIF3L1-206	ENST00000416651	FBXL19	Q6PCT2	694 aa		9.22	□□□□□ -0.93
NIF3L1-206	ENST00000416651	ZNF274	Q96GC6	653 aa	Predicted RBP	9.22	□□□□□ -0.93
NIF3L1-206	ENST00000416651	RPF1	Q9H9Y2	349 aa	Known RBP	9.22	□□□□□ -0.93
NIF3L1-206	ENST00000416651	TIMMDC1	Q9NPL8	285 aa		9.22	□□□□□ -0.93
NIF3L1-206	ENST00000416651	DDX43	Q9NXZ2	648 aa	Known RBP	9.22	□□□□□ -0.93
NIF3L1-206	ENST00000416651	DPP3	Q9NY33	737 aa		9.22	□□□□□ -0.93

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms