RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 XPO6Q96QU8 1125 aaKnown RBP10.95□□□□□ -0.66
COL12A1-203ENST00000416123 H2AFY2Q9P0M6 372 aaPredicted RBP10.95□□□□□ -0.66
COL12A1-203ENST00000416123 ACOX1Q15067 660 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 C4orf22Q6V702 233 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 TRPM8Q7Z2W7 1104 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 RNF168Q8IYW5 571 aaPredicted RBP10.95□□□□□ -0.66
COL12A1-203ENST00000416123 SLC5A5Q92911 643 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 FAM129AQ9BZQ8 928 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 FBXL21Q9UKT6 434 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 CHD4Q14839 1912 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 STRNO43815 780 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 SLC9A5Q14940 896 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 DENND1BQ6P3S1 775 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 GAD1Q99259 594 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 A1CFQ9NQ94 594 aaKnown RBP10.94□□□□□ -0.66
COL12A1-203ENST00000416123 SPATS2LQ9NUQ6 558 aaKnown RBP10.94□□□□□ -0.66
COL12A1-203ENST00000416123 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.94□□□□□ -0.66
COL12A1-203ENST00000416123 EIF3HO15372 352 aaKnown RBP eCLIP10.94□□□□□ -0.66
COL12A1-203ENST00000416123 STIP1P31948 543 aaKnown RBP10.94□□□□□ -0.66
COL12A1-203ENST00000416123 CASP7P55210 303 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 EVX2Q03828 476 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 PPATQ06203 517 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 LPCAT1Q8NF37 534 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 TMC2Q8TDI7 906 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 LPPQ93052 612 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 PHF21BQ96EK2 531 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 PLAGL2Q9UPG8 496 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 A0A087X0B3 334 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 EVPLLA8MZ36 301 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 SERPINB8P50452 374 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 FNDC3BQ53EP0 1204 aaKnown RBP10.94□□□□□ -0.66
COL12A1-203ENST00000416123 ARID3BQ8IVW6 561 aaPredicted RBP10.94□□□□□ -0.66
COL12A1-203ENST00000416123 TSEN34Q9BSV6 310 aaKnown RBP10.94□□□□□ -0.66
COL12A1-203ENST00000416123 SNX8Q9Y5X2 465 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 GLP2RO95838 553 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 AMPD1P23109 780 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 DLG4P78352 724 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 PPM1LQ5SGD2 360 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 DOK6Q6PKX4 331 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 ZNF333Q96JL9 665 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 RIC8BQ9NVN3 520 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 GID8Q9NWU2 228 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 CHUKO15111 745 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 TFE3P19532 575 aaPredicted RBP10.94□□□□□ -0.66
COL12A1-203ENST00000416123 CSHL1Q14406 222 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 AP1ARQ63HQ0 302 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 CCDC60Q8IWA6 550 aaPredicted RBP10.94□□□□□ -0.66
COL12A1-203ENST00000416123 UTP6Q9NYH9 597 aaKnown RBP10.94□□□□□ -0.66
COL12A1-203ENST00000416123 MTO1Q9Y2Z2 717 aaKnown RBP10.94□□□□□ -0.66
COL12A1-203ENST00000416123 ANKRD63C9JTQ0 380 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 KLHL2O95198 593 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 CPSF4O95639 269 aaKnown RBP10.94□□□□□ -0.66
COL12A1-203ENST00000416123 CRTAMO95727 393 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 LGALS2P05162 132 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 GJB1P08034 283 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 ERVK-10P10266 1014 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 GPC1P35052 558 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 REXO1L1PQ8IX06 675 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 LGI2Q8N0V4 545 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 GPRC5DQ9NZD1 345 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 TRPV2Q9Y5S1 764 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 VCLP18206 1134 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 PHKG1Q16816 387 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 SHROOM1Q2M3G4 852 aaPredicted RBP10.94□□□□□ -0.66
COL12A1-203ENST00000416123 MYO1HQ8N1T3 1032 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.94□□□□□ -0.66
COL12A1-203ENST00000416123 PLEKHA8Q96JA3 519 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 CNBD2Q96M20 576 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 EMILIN2Q9BXX0 1053 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 VPS33BQ9H267 617 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 FBXO44Q9H4M3 255 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 HPSEQ9Y251 543 aa10.94□□□□□ -0.66
COL12A1-203ENST00000416123 KDM4FA0A1W2PPD8 638 aa10.93□□□□□ -0.66
COL12A1-203ENST00000416123 PRIM2P49643 509 aa10.93□□□□□ -0.66
COL12A1-203ENST00000416123 CCNG1P51959 295 aa10.93□□□□□ -0.66
COL12A1-203ENST00000416123 TP53BP2Q13625 1128 aa10.93□□□□□ -0.66
COL12A1-203ENST00000416123 MTFR1Q15390 333 aa10.93□□□□□ -0.66
COL12A1-203ENST00000416123 TRMT11Q7Z4G4 463 aaKnown RBP10.93□□□□□ -0.66
COL12A1-203ENST00000416123 ZNF606Q8WXB4 792 aa10.93□□□□□ -0.66
COL12A1-203ENST00000416123 MTFMTQ96DP5 389 aaKnown RBP10.93□□□□□ -0.66
COL12A1-203ENST00000416123 STN1Q9H668 368 aaKnown RBP10.93□□□□□ -0.66
COL12A1-203ENST00000416123 COPS7BQ9H9Q2 264 aaPredicted RBP10.93□□□□□ -0.66
COL12A1-203ENST00000416123 DCDC2Q9UHG0 476 aa10.93□□□□□ -0.66
COL12A1-203ENST00000416123 KRT87PA6NCN2 255 aa10.93□□□□□ -0.66
COL12A1-203ENST00000416123 FBXO21O94952 628 aa10.93□□□□□ -0.66
COL12A1-203ENST00000416123 F9P00740 461 aa10.93□□□□□ -0.66
COL12A1-203ENST00000416123 ALDH9A1P49189 494 aa10.93□□□□□ -0.66
COL12A1-203ENST00000416123 ELOA2Q8IYF1 753 aaPredicted RBP10.93□□□□□ -0.66
COL12A1-203ENST00000416123 ILKAPQ9H0C8 392 aaPredicted RBP10.93□□□□□ -0.66
COL12A1-203ENST00000416123 TRDMT1O14717 391 aaKnown RBP10.93□□□□□ -0.66
COL12A1-203ENST00000416123 BTNL9Q6UXG8 535 aa10.93□□□□□ -0.66
COL12A1-203ENST00000416123 B3GALNT2Q8NCR0 500 aa10.93□□□□□ -0.66
COL12A1-203ENST00000416123 CNDP1Q96KN2 507 aa10.93□□□□□ -0.66
COL12A1-203ENST00000416123 LRRC4BQ9NT99 713 aa10.93□□□□□ -0.66
COL12A1-203ENST00000416123 BAZ2AQ9UIF9 1905 aaKnown RBP10.93□□□□□ -0.66
COL12A1-203ENST00000416123 MYOM1P52179 1685 aa10.93□□□□□ -0.66
COL12A1-203ENST00000416123 TPST1O60507 370 aa10.93□□□□□ -0.66
COL12A1-203ENST00000416123 YWHAQP27348 245 aa10.93□□□□□ -0.66
COL12A1-203ENST00000416123 CAPZA2P47755 286 aa10.93□□□□□ -0.66
COL12A1-203ENST00000416123 CELF3Q5SZQ8 465 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms