RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 FRYLO94915 3013 aa10.12□□□□□ -0.79
LINC01090-201ENST00000415357 CACNA1IQ9P0X4 2223 aa10.11□□□□□ -0.79
LINC01090-201ENST00000415357 PRR23AA6NEV1 266 aa10.11□□□□□ -0.79
LINC01090-201ENST00000415357 PROB1E7EW31 1015 aa10.11□□□□□ -0.79
LINC01090-201ENST00000415357 PMM2O15305 246 aa10.11□□□□□ -0.79
LINC01090-201ENST00000415357 GNA14O95837 355 aa10.11□□□□□ -0.79
LINC01090-201ENST00000415357 EGFP01133 1207 aa10.11□□□□□ -0.79
LINC01090-201ENST00000415357 CYP17A1P05093 508 aa10.11□□□□□ -0.79
LINC01090-201ENST00000415357 CCDC192P0DO97 292 aa10.11□□□□□ -0.79
LINC01090-201ENST00000415357 TBXAS1P24557 533 aaPredicted RBP10.11□□□□□ -0.79
LINC01090-201ENST00000415357 KIF11P52732 1056 aa10.11□□□□□ -0.79
LINC01090-201ENST00000415357 YWHAEP62258 255 aaKnown RBP10.11□□□□□ -0.79
LINC01090-201ENST00000415357 CCINQ13939 588 aa10.11□□□□□ -0.79
LINC01090-201ENST00000415357 LRRC32Q14392 662 aa10.11□□□□□ -0.79
LINC01090-201ENST00000415357 ARHGAP17Q68EM7 881 aa10.11□□□□□ -0.79
LINC01090-201ENST00000415357 C1orf228Q6PIY5 440 aa10.11□□□□□ -0.79
LINC01090-201ENST00000415357 TMEM270Q6UE05 265 aa10.11□□□□□ -0.79
LINC01090-201ENST00000415357 SCD5Q86SK9 330 aa10.11□□□□□ -0.79
LINC01090-201ENST00000415357 PIGZQ86VD9 579 aa10.11□□□□□ -0.79
LINC01090-201ENST00000415357 MLKLQ8NB16 471 aa10.11□□□□□ -0.79
LINC01090-201ENST00000415357 UBA3Q8TBC4 463 aa10.11□□□□□ -0.79
LINC01090-201ENST00000415357 GPT2Q8TD30 523 aa10.11□□□□□ -0.79
LINC01090-201ENST00000415357 ATP2A3Q93084 1043 aa10.11□□□□□ -0.79
LINC01090-201ENST00000415357 KREMEN1Q96MU8 473 aa10.11□□□□□ -0.79
LINC01090-201ENST00000415357 DNAI2Q9GZS0 605 aa10.11□□□□□ -0.79
LINC01090-201ENST00000415357 NACA2Q9H009 215 aa10.11□□□□□ -0.79
LINC01090-201ENST00000415357 PNPLA8Q9NP80 782 aa10.11□□□□□ -0.79
LINC01090-201ENST00000415357 PRMT8Q9NR22 394 aaPredicted RBP10.11□□□□□ -0.79
LINC01090-201ENST00000415357 TLR8Q9NR97 1041 aaKnown RBP10.11□□□□□ -0.79
LINC01090-201ENST00000415357 SCML2Q9UQR0 700 aa10.11□□□□□ -0.79
LINC01090-201ENST00000415357 PCDHB4Q9Y5E5 795 aa10.11□□□□□ -0.79
LINC01090-201ENST00000415357 ZFHX2Q9C0A1 2572 aaPredicted RBP10.11□□□□□ -0.79
LINC01090-201ENST00000415357 PIEZO1Q92508 2521 aa10.1□□□□□ -0.79
LINC01090-201ENST00000415357 ANTXRLA6NF34 631 aa10.1□□□□□ -0.79
LINC01090-201ENST00000415357 RNF225M0QZC1 329 aaPredicted RBP10.1□□□□□ -0.79
LINC01090-201ENST00000415357 O00370 1275 aa10.1□□□□□ -0.79
LINC01090-201ENST00000415357 P4HA2O15460 535 aa10.1□□□□□ -0.79
LINC01090-201ENST00000415357 NFATC1O95644 943 aa10.1□□□□□ -0.79
LINC01090-201ENST00000415357 FGFR1OPO95684 399 aaKnown RBP10.1□□□□□ -0.79
LINC01090-201ENST00000415357 TDGF1P13385 188 aa10.1□□□□□ -0.79
LINC01090-201ENST00000415357 RARGP13631 454 aa10.1□□□□□ -0.79
LINC01090-201ENST00000415357 BRD2P25440 801 aaKnown RBP10.1□□□□□ -0.79
LINC01090-201ENST00000415357 TUBP50607 506 aa10.1□□□□□ -0.79
LINC01090-201ENST00000415357 GALK1P51570 392 aa10.1□□□□□ -0.79
LINC01090-201ENST00000415357 APBA1Q02410 837 aa10.1□□□□□ -0.79
LINC01090-201ENST00000415357 PDE4CQ08493 712 aa10.1□□□□□ -0.79
LINC01090-201ENST00000415357 CETN1Q12798 172 aa10.1□□□□□ -0.79
LINC01090-201ENST00000415357 GAB4Q2WGN9 574 aa10.1□□□□□ -0.79
LINC01090-201ENST00000415357 SGO2Q562F6 1265 aa10.1□□□□□ -0.79
LINC01090-201ENST00000415357 HSP90AA4PQ58FG1 418 aa10.1□□□□□ -0.79
LINC01090-201ENST00000415357 TMEM196Q5HYL7 178 aa10.1□□□□□ -0.79
LINC01090-201ENST00000415357 GJB7Q6PEY0 223 aa10.1□□□□□ -0.79
LINC01090-201ENST00000415357 BBS7Q8IWZ6 715 aa10.1□□□□□ -0.79
LINC01090-201ENST00000415357 ANKRD52Q8NB46 1076 aa10.1□□□□□ -0.79
LINC01090-201ENST00000415357 RBBP8NLQ8NC74 664 aaPredicted RBP10.1□□□□□ -0.79
LINC01090-201ENST00000415357 TFAP2BQ92481 460 aa10.1□□□□□ -0.79
LINC01090-201ENST00000415357 NDRG1Q92597 394 aaKnown RBP10.1□□□□□ -0.79
LINC01090-201ENST00000415357 EZH1Q92800 747 aaPredicted RBP10.1□□□□□ -0.79
LINC01090-201ENST00000415357 P2RY13Q9BPV8 354 aa10.1□□□□□ -0.79
LINC01090-201ENST00000415357 ZSWIM1Q9BR11 485 aa10.1□□□□□ -0.79
LINC01090-201ENST00000415357 CRACR2AQ9BSW2 395 aa10.1□□□□□ -0.79
LINC01090-201ENST00000415357 FAM124BQ9H5Z6 455 aaPredicted RBP10.1□□□□□ -0.79
LINC01090-201ENST00000415357 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.1□□□□□ -0.79
LINC01090-201ENST00000415357 POLR3BQ9NW08 1133 aaPredicted RBP10.1□□□□□ -0.79
LINC01090-201ENST00000415357 NAGPAQ9UK23 515 aa10.1□□□□□ -0.79
LINC01090-201ENST00000415357 FBXO4Q9UKT5 387 aa10.1□□□□□ -0.79
LINC01090-201ENST00000415357 USP3Q9Y6I4 520 aa10.1□□□□□ -0.79
LINC01090-201ENST00000415357 WDR87Q6ZQQ6 2873 aa10.1□□□□□ -0.79
LINC01090-201ENST00000415357 PIK3R2O00459 728 aa10.09□□□□□ -0.79
LINC01090-201ENST00000415357 TRDMT1O14717 391 aaKnown RBP10.09□□□□□ -0.79
LINC01090-201ENST00000415357 VDRP11473 427 aa10.09□□□□□ -0.79
LINC01090-201ENST00000415357 OPRD1P41143 372 aa10.09□□□□□ -0.79
LINC01090-201ENST00000415357 MTIF2P46199 727 aaKnown RBP10.09□□□□□ -0.79
LINC01090-201ENST00000415357 CCR3P51677 355 aa10.09□□□□□ -0.79
LINC01090-201ENST00000415357 TKTL1P51854 596 aa10.09□□□□□ -0.79
LINC01090-201ENST00000415357 BCAT1P54687 386 aa10.09□□□□□ -0.79
LINC01090-201ENST00000415357 GCNT1Q02742 428 aa10.09□□□□□ -0.79
LINC01090-201ENST00000415357 DMWDQ09019 674 aa10.09□□□□□ -0.79
LINC01090-201ENST00000415357 MESP2Q0VG99 397 aa10.09□□□□□ -0.79
LINC01090-201ENST00000415357 BST2Q10589 180 aaKnown RBP10.09□□□□□ -0.79
LINC01090-201ENST00000415357 GRSF1Q12849 480 aaKnown RBP eCLIP10.09□□□□□ -0.79
LINC01090-201ENST00000415357 DHCR24Q15392 516 aa10.09□□□□□ -0.79
LINC01090-201ENST00000415357 TPD52L1Q16890 204 aaPredicted RBP10.09□□□□□ -0.79
LINC01090-201ENST00000415357 DGKKQ5KSL6 1271 aa10.09□□□□□ -0.79
LINC01090-201ENST00000415357 C10orf120Q5SQS8 335 aa10.09□□□□□ -0.79
LINC01090-201ENST00000415357 CCDC186Q7Z3E2 898 aa10.09□□□□□ -0.79
LINC01090-201ENST00000415357 C12orf40Q86WS4 652 aa10.09□□□□□ -0.79
LINC01090-201ENST00000415357 DDX42Q86XP3 938 aaKnown RBP eCLIP10.09□□□□□ -0.79
LINC01090-201ENST00000415357 SFTPA1Q8IWL2 248 aa10.09□□□□□ -0.79
LINC01090-201ENST00000415357 SPEM1Q8N4L4 309 aa10.09□□□□□ -0.79
LINC01090-201ENST00000415357 CD101Q93033 1021 aa10.09□□□□□ -0.79
LINC01090-201ENST00000415357 NKD2Q969F2 451 aaPredicted RBP10.09□□□□□ -0.79
LINC01090-201ENST00000415357 IPO9Q96P70 1041 aaKnown RBP10.09□□□□□ -0.79
LINC01090-201ENST00000415357 GBP4Q96PP9 640 aa10.09□□□□□ -0.79
LINC01090-201ENST00000415357 KLF16Q9BXK1 252 aaPredicted RBP10.09□□□□□ -0.79
LINC01090-201ENST00000415357 ULBP1Q9BZM6 244 aa10.09□□□□□ -0.79
LINC01090-201ENST00000415357 CYLDQ9NQC7 956 aa10.09□□□□□ -0.79
LINC01090-201ENST00000415357 HESX1Q9UBX0 185 aa10.09□□□□□ -0.79
LINC01090-201ENST00000415357 SH3BP1Q9Y3L3 701 aa10.09□□□□□ -0.79
LINC01090-201ENST00000415357 CFAP54Q96N23 3096 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms