RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 TADA2BQ86TJ2 420 aa27.6■■■□□ 2.01
VEGFA-207ENST00000413642 WDR5BQ86VZ2 330 aa27.6■■■□□ 2.01
VEGFA-207ENST00000413642 EDEM1Q92611 657 aa27.6■■■□□ 2.01
VEGFA-207ENST00000413642 ACP6Q9NPH0 428 aa27.6■■■□□ 2.01
VEGFA-207ENST00000413642 CNTN6Q9UQ52 1028 aa27.6■■■□□ 2.01
VEGFA-207ENST00000413642 VPS13AQ96RL7 3174 aa27.6■■■□□ 2.01
VEGFA-207ENST00000413642 TULP3O75386 442 aa27.59■■■□□ 2.01
VEGFA-207ENST00000413642 APODP05090 189 aa27.59■■■□□ 2.01
VEGFA-207ENST00000413642 EIF2DP41214 584 aaKnown RBP27.59■■■□□ 2.01
VEGFA-207ENST00000413642 SIM2Q14190 667 aaPredicted RBP27.59■■■□□ 2.01
VEGFA-207ENST00000413642 BTBD8Q5XKL5 378 aa27.59■■■□□ 2.01
VEGFA-207ENST00000413642 SYT13Q7L8C5 426 aa27.59■■■□□ 2.01
VEGFA-207ENST00000413642 KIAA2013Q8IYS2 634 aa27.59■■■□□ 2.01
VEGFA-207ENST00000413642 SIX6OS1Q8N1H7 587 aa27.59■■■□□ 2.01
VEGFA-207ENST00000413642 IPO9Q96P70 1041 aaKnown RBP27.59■■■□□ 2.01
VEGFA-207ENST00000413642 MARCH2Q9P0N8 246 aa27.59■■■□□ 2.01
VEGFA-207ENST00000413642 NCDNQ9UBB6 729 aa27.59■■■□□ 2.01
VEGFA-207ENST00000413642 GPR179Q6PRD1 2367 aa27.59■■■□□ 2.01
VEGFA-207ENST00000413642 SLC12A8A0AV02 714 aa27.58■■■□□ 2.01
VEGFA-207ENST00000413642 BSPRYQ5W0U4 402 aa27.58■■■□□ 2.01
VEGFA-207ENST00000413642 GBP6Q6ZN66 633 aa27.58■■■□□ 2.01
VEGFA-207ENST00000413642 BHMTQ93088 406 aa27.58■■■□□ 2.01
VEGFA-207ENST00000413642 CDK5RAP1Q96SZ6 601 aaKnown RBP27.58■■■□□ 2.01
VEGFA-207ENST00000413642 THAP9Q9H5L6 903 aa27.58■■■□□ 2.01
VEGFA-207ENST00000413642 AJAP1Q9UKB5 411 aaPredicted RBP27.58■■■□□ 2.01
VEGFA-207ENST00000413642 A0A0A0MRY4 1105 aa27.57■■■□□ 2
VEGFA-207ENST00000413642 NEDD8-MDP1E9PL57 170 aa27.57■■■□□ 2
VEGFA-207ENST00000413642 ERCC5P28715 1186 aaPredicted RBP27.57■■■□□ 2
VEGFA-207ENST00000413642 TIE1P35590 1138 aa27.57■■■□□ 2
VEGFA-207ENST00000413642 GRIA2P42262 883 aa27.57■■■□□ 2
VEGFA-207ENST00000413642 DAOAP59103 153 aa27.57■■■□□ 2
VEGFA-207ENST00000413642 ARHGAP44Q17R89 818 aa27.57■■■□□ 2
VEGFA-207ENST00000413642 DENND1BQ6P3S1 775 aa27.57■■■□□ 2
VEGFA-207ENST00000413642 ALLCQ8N6M5 410 aa27.57■■■□□ 2
VEGFA-207ENST00000413642 CLEC4CQ8WTT0 213 aa27.57■■■□□ 2
VEGFA-207ENST00000413642 ACDQ96AP0 544 aa27.57■■■□□ 2
VEGFA-207ENST00000413642 BBS2Q9BXC9 721 aa27.57■■■□□ 2
VEGFA-207ENST00000413642 DEC1Q9P2X7 70 aa27.57■■■□□ 2
VEGFA-207ENST00000413642 DMDP11532 3685 aa27.57■■■□□ 2
VEGFA-207ENST00000413642 RIF1Q5UIP0 2472 aaKnown RBP27.57■■■□□ 2
VEGFA-207ENST00000413642 PTPRZ1P23471 2315 aaPredicted RBP27.56■■■□□ 2
VEGFA-207ENST00000413642 BECN2A8MW95 431 aa27.56■■■□□ 2
VEGFA-207ENST00000413642 TYRP14679 529 aa27.56■■■□□ 2
VEGFA-207ENST00000413642 HNRNPLP14866 589 aaKnown RBP eCLIP27.56■■■□□ 2
VEGFA-207ENST00000413642 PON1P27169 355 aa27.56■■■□□ 2
VEGFA-207ENST00000413642 CORO1AP31146 461 aaKnown RBP27.56■■■□□ 2
VEGFA-207ENST00000413642 COG7P83436 770 aa27.56■■■□□ 2
VEGFA-207ENST00000413642 GBP4Q96PP9 640 aa27.56■■■□□ 2
VEGFA-207ENST00000413642 CNGB3Q9NQW8 809 aa27.56■■■□□ 2
VEGFA-207ENST00000413642 PLK2Q9NYY3 685 aa27.56■■■□□ 2
VEGFA-207ENST00000413642 SFMBT1Q9UHJ3 866 aa27.56■■■□□ 2
VEGFA-207ENST00000413642 TBC1D3BA6NDS4 549 aa27.55■■■□□ 2
VEGFA-207ENST00000413642 PALM2-AKAP2B1ALY0 433 aaPredicted RBP27.55■■■□□ 2
VEGFA-207ENST00000413642 LETM1O95202 739 aaPredicted RBP27.55■■■□□ 2
VEGFA-207ENST00000413642 KLF8O95600 359 aaPredicted RBP27.55■■■□□ 2
VEGFA-207ENST00000413642 KIR2DL1P43626 348 aaPredicted RBP27.55■■■□□ 2
VEGFA-207ENST00000413642 MFAP3P55082 362 aa27.55■■■□□ 2
VEGFA-207ENST00000413642 STILQ15468 1287 aa27.55■■■□□ 2
VEGFA-207ENST00000413642 MAN2A1Q16706 1144 aa27.55■■■□□ 2
VEGFA-207ENST00000413642 EXOC3L4Q17RC7 722 aa27.55■■■□□ 2
VEGFA-207ENST00000413642 DENND1CQ8IV53 801 aa27.55■■■□□ 2
VEGFA-207ENST00000413642 CAMKK1Q8N5S9 505 aa27.55■■■□□ 2
VEGFA-207ENST00000413642 TXNDC5Q8NBS9 432 aaKnown RBP27.55■■■□□ 2
VEGFA-207ENST00000413642 MIS12Q9H081 205 aa27.55■■■□□ 2
VEGFA-207ENST00000413642 SIX2Q9NPC8 291 aa27.55■■■□□ 2
VEGFA-207ENST00000413642 SAMSN1Q9NSI8 373 aaKnown RBP27.55■■■□□ 2
VEGFA-207ENST00000413642 DNAJC17Q9NVM6 304 aaKnown RBP27.55■■■□□ 2
VEGFA-207ENST00000413642 MARK1Q9P0L2 795 aa27.55■■■□□ 2
VEGFA-207ENST00000413642 DACH1Q9UI36 760 aa27.55■■■□□ 2
VEGFA-207ENST00000413642 AGO1Q9UL18 857 aaKnown RBP27.55■■■□□ 2
VEGFA-207ENST00000413642 HCN2Q9UL51 889 aa27.55■■■□□ 2
VEGFA-207ENST00000413642 STRIP2Q9ULQ0 834 aa27.55■■■□□ 2
VEGFA-207ENST00000413642 ATG2BQ96BY7 2078 aa27.55■■■□□ 2
VEGFA-207ENST00000413642 CNR2P34972 360 aa27.54■■■□□ 2
VEGFA-207ENST00000413642 USP8P40818 1118 aa27.54■■■□□ 2
VEGFA-207ENST00000413642 GPD2P43304 727 aa27.54■■■□□ 2
VEGFA-207ENST00000413642 MRPS21P82921 87 aaKnown RBP27.54■■■□□ 2
VEGFA-207ENST00000413642 CEP68Q76N32 757 aa27.54■■■□□ 2
VEGFA-207ENST00000413642 FMNL3Q8IVF7 1028 aa27.54■■■□□ 2
VEGFA-207ENST00000413642 IL17RCQ8NAC3 791 aa27.54■■■□□ 2
VEGFA-207ENST00000413642 CCDC26Q8TAB7 109 aa27.54■■■□□ 2
VEGFA-207ENST00000413642 WDR35Q9P2L0 1181 aa27.54■■■□□ 2
VEGFA-207ENST00000413642 APEX2Q9UBZ4 518 aa27.54■■■□□ 2
VEGFA-207ENST00000413642 RAB23Q9ULC3 237 aa27.54■■■□□ 2
VEGFA-207ENST00000413642 SGK1O00141 431 aa27.53■■■□□ 2
VEGFA-207ENST00000413642 AXIN1O15169 862 aa27.53■■■□□ 2
VEGFA-207ENST00000413642 APBB3O95704 486 aa27.53■■■□□ 2
VEGFA-207ENST00000413642 TNFRSF4P43489 277 aa27.53■■■□□ 2
VEGFA-207ENST00000413642 MIIPQ5JXC2 388 aa27.53■■■□□ 2
VEGFA-207ENST00000413642 C10orf76Q5T2E6 689 aa27.53■■■□□ 2
VEGFA-207ENST00000413642 GRAMD4Q6IC98 578 aa27.53■■■□□ 2
VEGFA-207ENST00000413642 TMEM92Q6UXU6 159 aa27.53■■■□□ 2
VEGFA-207ENST00000413642 TOGARAM2Q6ZUX3 1019 aa27.53■■■□□ 2
VEGFA-207ENST00000413642 SCML4Q8N228 414 aa27.53■■■□□ 2
VEGFA-207ENST00000413642 TSTD1Q8NFU3 115 aa27.53■■■□□ 2
VEGFA-207ENST00000413642 RNF139Q8WU17 664 aa27.53■■■□□ 2
VEGFA-207ENST00000413642 ZNF606Q8WXB4 792 aa27.53■■■□□ 2
VEGFA-207ENST00000413642 HSFY1Q96LI6 401 aa27.53■■■□□ 2
VEGFA-207ENST00000413642 TUBGCP2Q9BSJ2 902 aa27.53■■■□□ 2
VEGFA-207ENST00000413642 MMP17Q9ULZ9 603 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms