RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 GDAP2Q9NXN4 497 aa11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 ZC3H7BQ9UGR2 993 aaKnown RBP11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 SMIM28A0A1B0GU29 152 aa11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 MBLAC1A4D2B0 266 aaPredicted RBP11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 IQCA1LA6NCM1 817 aa11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 DCAF8L1A6NGE4 600 aa11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 GCATO75600 419 aa11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 F2P00734 622 aa11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 GSTA2P09210 222 aa11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 TROVE2P10155 538 aaKnown RBP eCLIP11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 LCP1P13796 627 aa11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 CCDC130P13994 396 aa11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 AKAP5P24588 427 aa11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 SLC18A2Q05940 514 aa11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 FAAP100Q0VG06 881 aa11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 SLC45A4Q5BKX6 768 aa11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 TTC39BQ5VTQ0 682 aaPredicted RBP11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 LRRC6Q86X45 466 aa11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 VPS52Q8N1B4 723 aa11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 ANKLE1Q8NAG6 615 aa11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 CCDC110Q8TBZ0 833 aa11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 ZNF398Q8TD17 642 aa11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 KBTBD7Q8WVZ9 684 aa11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 ERP27Q96DN0 273 aa11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 CFAP36Q96G28 342 aa11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 LPIN3Q9BQK8 851 aa11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 MYLK2Q9H1R3 596 aa11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 MANSC1Q9H8J5 431 aa11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 ETNK1Q9HBU6 452 aa11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 AP4E1Q9UPM8 1137 aa11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 WDR91A4D1P6 747 aa11.91□□□□□ -0.5
TRAFD1-202ENST00000412615 VGLL3A8MV65 326 aa11.91□□□□□ -0.5
TRAFD1-202ENST00000412615 CAPN15O75808 1086 aa11.91□□□□□ -0.5
TRAFD1-202ENST00000412615 MAP3K6O95382 1288 aa11.91□□□□□ -0.5
TRAFD1-202ENST00000412615 TFE3P19532 575 aaPredicted RBP11.91□□□□□ -0.5
TRAFD1-202ENST00000412615 FAM110CQ1W6H9 321 aa11.91□□□□□ -0.5
TRAFD1-202ENST00000412615 EFHC1Q5JVL4 640 aa11.91□□□□□ -0.5
TRAFD1-202ENST00000412615 FAXCQ5TGI0 409 aa11.91□□□□□ -0.5
TRAFD1-202ENST00000412615 CAND1Q86VP6 1230 aaKnown RBP11.91□□□□□ -0.5
TRAFD1-202ENST00000412615 ZNF276Q8N554 614 aa11.91□□□□□ -0.5
TRAFD1-202ENST00000412615 APPL2Q8NEU8 664 aa11.91□□□□□ -0.5
TRAFD1-202ENST00000412615 NPLOC4Q8TAT6 608 aa11.91□□□□□ -0.5
TRAFD1-202ENST00000412615 FBXO41Q8TF61 875 aa11.91□□□□□ -0.5
TRAFD1-202ENST00000412615 CLEC4CQ8WTT0 213 aa11.91□□□□□ -0.5
TRAFD1-202ENST00000412615 C10orf82Q8WW14 230 aa11.91□□□□□ -0.5
TRAFD1-202ENST00000412615 APOPT1Q96IL0 206 aa11.91□□□□□ -0.5
TRAFD1-202ENST00000412615 PARK7Q99497 189 aaKnown RBP11.91□□□□□ -0.5
TRAFD1-202ENST00000412615 POPDC2Q9HBU9 364 aa11.91□□□□□ -0.5
TRAFD1-202ENST00000412615 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.91□□□□□ -0.5
TRAFD1-202ENST00000412615 SLC17A7Q9P2U7 560 aa11.91□□□□□ -0.5
TRAFD1-202ENST00000412615 ZNF180Q9UJW8 692 aa11.91□□□□□ -0.5
TRAFD1-202ENST00000412615 PIN4Q9Y237 131 aaKnown RBP11.91□□□□□ -0.5
TRAFD1-202ENST00000412615 CLEC11AQ9Y240 323 aa11.91□□□□□ -0.5
TRAFD1-202ENST00000412615 CHKBQ9Y259 395 aa11.91□□□□□ -0.5
TRAFD1-202ENST00000412615 KAT6AQ92794 2004 aa11.91□□□□□ -0.5
TRAFD1-202ENST00000412615 GLTPD2A6NH11 291 aa11.91□□□□□ -0.5
TRAFD1-202ENST00000412615 SLC15A5A6NIM6 579 aa11.91□□□□□ -0.5
TRAFD1-202ENST00000412615 ADCY6O43306 1168 aa11.91□□□□□ -0.5
TRAFD1-202ENST00000412615 KRT37O76014 449 aa11.91□□□□□ -0.5
TRAFD1-202ENST00000412615 FGFR1P11362 822 aa11.91□□□□□ -0.5
TRAFD1-202ENST00000412615 LMO2P25791 158 aa11.91□□□□□ -0.5
TRAFD1-202ENST00000412615 TAF6P49848 677 aa11.91□□□□□ -0.5
TRAFD1-202ENST00000412615 STRADAQ7RTN6 431 aa11.91□□□□□ -0.5
TRAFD1-202ENST00000412615 CEP57Q86XR8 500 aa11.91□□□□□ -0.5
TRAFD1-202ENST00000412615 CTAGE3PQ8IX95 158 aa11.91□□□□□ -0.5
TRAFD1-202ENST00000412615 AGGF1Q8N302 714 aaeCLIP11.91□□□□□ -0.5
TRAFD1-202ENST00000412615 KIF2BQ8N4N8 673 aa11.91□□□□□ -0.5
TRAFD1-202ENST00000412615 SERAC1Q96JX3 654 aa11.91□□□□□ -0.5
TRAFD1-202ENST00000412615 TNIP3Q96KP6 325 aa11.91□□□□□ -0.5
TRAFD1-202ENST00000412615 SYT17Q9BSW7 474 aa11.91□□□□□ -0.5
TRAFD1-202ENST00000412615 GTF2IRD1Q9UHL9 959 aa11.91□□□□□ -0.5
TRAFD1-202ENST00000412615 SCN1AP35498 2009 aa11.91□□□□□ -0.5
TRAFD1-202ENST00000412615 C2CD2LO14523 706 aa11.9□□□□□ -0.5
TRAFD1-202ENST00000412615 SPTLC1O15269 473 aa11.9□□□□□ -0.5
TRAFD1-202ENST00000412615 HCRTO43612 131 aa11.9□□□□□ -0.5
TRAFD1-202ENST00000412615 KCNE1P15382 129 aa11.9□□□□□ -0.5
TRAFD1-202ENST00000412615 TPSB2P20231 275 aa11.9□□□□□ -0.5
TRAFD1-202ENST00000412615 PRKCHP24723 683 aa11.9□□□□□ -0.5
TRAFD1-202ENST00000412615 GBE1Q04446 702 aa11.9□□□□□ -0.5
TRAFD1-202ENST00000412615 TPSAB1Q15661 275 aa11.9□□□□□ -0.5
TRAFD1-202ENST00000412615 SV2CQ496J9 727 aa11.9□□□□□ -0.5
TRAFD1-202ENST00000412615 SPDYAQ5MJ70 313 aa11.9□□□□□ -0.5
TRAFD1-202ENST00000412615 SH2D5Q6ZV89 423 aa11.9□□□□□ -0.5
TRAFD1-202ENST00000412615 BZW1Q7L1Q6 419 aaKnown RBP11.9□□□□□ -0.5
TRAFD1-202ENST00000412615 PRPF39Q86UA1 669 aaKnown RBP11.9□□□□□ -0.5
TRAFD1-202ENST00000412615 CHSY1Q86X52 802 aa11.9□□□□□ -0.5
TRAFD1-202ENST00000412615 PPM1NQ8N819 430 aa11.9□□□□□ -0.5
TRAFD1-202ENST00000412615 SLC2A14Q8TDB8 520 aa11.9□□□□□ -0.5
TRAFD1-202ENST00000412615 DNAJB3Q8WWF6 145 aa11.9□□□□□ -0.5
TRAFD1-202ENST00000412615 APBB2Q92870 758 aa11.9□□□□□ -0.5
TRAFD1-202ENST00000412615 CSPG4P5Q96PW8 444 aa11.9□□□□□ -0.5
TRAFD1-202ENST00000412615 RAB3IPQ96QF0 476 aaPredicted RBP11.9□□□□□ -0.5
TRAFD1-202ENST00000412615 RNF19AQ9NV58 838 aa11.9□□□□□ -0.5
TRAFD1-202ENST00000412615 MTMR10Q9NXD2 777 aa11.9□□□□□ -0.5
TRAFD1-202ENST00000412615 KLK14Q9P0G3 267 aa11.9□□□□□ -0.5
TRAFD1-202ENST00000412615 TTLL3Q9Y4R7 772 aa11.9□□□□□ -0.5
TRAFD1-202ENST00000412615 RALGAPA2Q2PPJ7 1873 aa11.9□□□□□ -0.5
TRAFD1-202ENST00000412615 HUS1O60921 280 aa11.9□□□□□ -0.5
TRAFD1-202ENST00000412615 FAM155BO75949 473 aa11.9□□□□□ -0.5
TRAFD1-202ENST00000412615 KRT16P08779 473 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms