RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 ERI1Q8IV48 349 aaKnown RBP8.78□□□□□ -1
PBRM1-209ENST00000412587 VPS37AQ8NEZ2 397 aa8.78□□□□□ -1
PBRM1-209ENST00000412587 MAGED4Q96JG8 741 aa8.78□□□□□ -1
PBRM1-209ENST00000412587 WNT8AQ9H1J5 351 aa8.78□□□□□ -1
PBRM1-209ENST00000412587 C8orf4Q9NR00 106 aa8.78□□□□□ -1
PBRM1-209ENST00000412587 ZNF510Q9Y2H8 683 aa8.78□□□□□ -1
PBRM1-209ENST00000412587 PDZK1P1A8MUH7 402 aa8.77□□□□□ -1
PBRM1-209ENST00000412587 DPYSL4O14531 572 aa8.77□□□□□ -1
PBRM1-209ENST00000412587 ATP9BO43861 1147 aa8.77□□□□□ -1
PBRM1-209ENST00000412587 SIN3BO75182 1162 aa8.77□□□□□ -1
PBRM1-209ENST00000412587 GSTT2P0CG29 244 aa8.77□□□□□ -1
PBRM1-209ENST00000412587 GSTT2BP0CG30 244 aa8.77□□□□□ -1
PBRM1-209ENST00000412587 SLC9A1P19634 815 aa8.77□□□□□ -1
PBRM1-209ENST00000412587 TM4SF1P30408 202 aa8.77□□□□□ -1
PBRM1-209ENST00000412587 TOB1P50616 345 aaPredicted RBP8.77□□□□□ -1
PBRM1-209ENST00000412587 GEMIN4P57678 1058 aaKnown RBP8.77□□□□□ -1
PBRM1-209ENST00000412587 ACVR2BQ13705 512 aa8.77□□□□□ -1
PBRM1-209ENST00000412587 MAPK11Q15759 364 aa8.77□□□□□ -1
PBRM1-209ENST00000412587 NEK5Q6P3R8 708 aa8.77□□□□□ -1
PBRM1-209ENST00000412587 GATAD2AQ86YP4 633 aa8.77□□□□□ -1
PBRM1-209ENST00000412587 NDUFAF2Q8N183 169 aa8.77□□□□□ -1
PBRM1-209ENST00000412587 ATP6V1E2Q96A05 226 aa8.77□□□□□ -1
PBRM1-209ENST00000412587 TAMM41Q96BW9 452 aa8.77□□□□□ -1
PBRM1-209ENST00000412587 CITED4Q96RK1 184 aa8.77□□□□□ -1
PBRM1-209ENST00000412587 SIK2Q9H0K1 926 aa8.77□□□□□ -1
PBRM1-209ENST00000412587 TMEM8AQ9HCN3 771 aa8.77□□□□□ -1
PBRM1-209ENST00000412587 MID2Q9UJV3 735 aa8.77□□□□□ -1
PBRM1-209ENST00000412587 USP20Q9Y2K6 914 aa8.77□□□□□ -1
PBRM1-209ENST00000412587 EXTL3O43909 919 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 HSPA4LO95757 839 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 FYNP06241 537 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 SUPT20HL2P0C7V6 817 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 MYL2P10916 166 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 VCLP18206 1134 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 MUTP22033 750 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 DSG3P32926 999 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 GSSP48637 474 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 BCAP31P51572 246 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 BNC1Q01954 994 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 PKN1Q16512 942 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 PUS10Q3MIT2 529 aaKnown RBP8.77□□□□□ -1.01
PBRM1-209ENST00000412587 IZUMO3Q5VZ72 239 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 DCLK2Q8N568 766 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 SNX27Q96L92 541 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 RUSC1Q9BVN2 902 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 GLIS2Q9BZE0 524 aaPredicted RBP8.77□□□□□ -1.01
PBRM1-209ENST00000412587 WDR12Q9GZL7 423 aaKnown RBP8.77□□□□□ -1.01
PBRM1-209ENST00000412587 RNF38Q9H0F5 515 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 SEMA4AQ9H3S1 761 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 GPAMQ9HCL2 828 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 IARS2Q9NSE4 1012 aaKnown RBP8.77□□□□□ -1.01
PBRM1-209ENST00000412587 SLC38A7Q9NVC3 462 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 STK39Q9UEW8 545 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 ADGRB2O60241 1585 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 RIPK2O43353 540 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 AKAP10O43572 662 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 LCP1P13796 627 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 PLOD1Q02809 727 aaPredicted RBP8.77□□□□□ -1.01
PBRM1-209ENST00000412587 ITPRIPL1Q6GPH6 555 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 NOTUMQ6P988 496 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 TTC30AQ86WT1 665 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 FBXO16Q8IX29 292 aaPredicted RBP8.77□□□□□ -1.01
PBRM1-209ENST00000412587 FBXL16Q8N461 479 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 MINDY2Q8NBR6 621 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 PLEKHO2Q8TD55 490 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 MKL1Q969V6 931 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 WNK4Q96J92 1243 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 PXMP2Q9NR77 195 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 AGPAT3Q9NRZ7 376 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 CPA4Q9UI42 421 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 TBX20Q9UMR3 447 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 CCDC195A0A1B0GUA6 201 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 ADM5C9JUS6 153 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 FCHO1O14526 889 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 ALDH1A3P47895 512 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 AKR1D1P51857 326 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 CDH6P55285 790 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 INPP5AQ14642 412 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 RIPOR1Q6ZS17 1223 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 SPATA2LQ8IUW3 424 aaPredicted RBP8.77□□□□□ -1.01
PBRM1-209ENST00000412587 ZFPM1Q8IX07 1006 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 SYN2Q92777 582 aaPredicted RBP8.77□□□□□ -1.01
PBRM1-209ENST00000412587 VPS39Q96JC1 886 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 SPON2Q9BUD6 331 aa8.77□□□□□ -1.01
PBRM1-209ENST00000412587 NKX1-2Q9UD57 310 aaPredicted RBP8.77□□□□□ -1.01
PBRM1-209ENST00000412587 PDGFRBP09619 1106 aa8.76□□□□□ -1.01
PBRM1-209ENST00000412587 FAM228BP0C875 321 aa8.76□□□□□ -1.01
PBRM1-209ENST00000412587 KHDC1Q4VXA5 237 aaKnown RBP8.76□□□□□ -1.01
PBRM1-209ENST00000412587 ACMSDQ8TDX5 336 aa8.76□□□□□ -1.01
PBRM1-209ENST00000412587 PYDC1Q8WXC3 89 aa8.76□□□□□ -1.01
PBRM1-209ENST00000412587 C9orf72Q96LT7 481 aa8.76□□□□□ -1.01
PBRM1-209ENST00000412587 BTBD9Q96Q07 612 aa8.76□□□□□ -1.01
PBRM1-209ENST00000412587 MRIQ9BWK5 157 aa8.76□□□□□ -1.01
PBRM1-209ENST00000412587 GPRC5CQ9NQ84 441 aa8.76□□□□□ -1.01
PBRM1-209ENST00000412587 GAKO14976 1311 aa8.76□□□□□ -1.01
PBRM1-209ENST00000412587 SNPHO15079 494 aa8.76□□□□□ -1.01
PBRM1-209ENST00000412587 WDR47O94967 919 aa8.76□□□□□ -1.01
PBRM1-209ENST00000412587 GJB6O95452 261 aa8.76□□□□□ -1.01
PBRM1-209ENST00000412587 ATP5BP06576 529 aaKnown RBP8.76□□□□□ -1.01
PBRM1-209ENST00000412587 RALAP11233 206 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms