RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 MCIDASD6RGH6 385 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 CDC7O00311 574 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 OPLAHO14841 1288 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 ACSL3O95573 720 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 NUDT7P0C024 238 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 ACAT1P24752 427 aaKnown RBP4.71□□□□□ -1.66
PTPN13-202ENST00000411767 SLC1A3P43003 542 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 NPTX2P47972 431 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 CRISP1P54107 249 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 KCNQ4P56696 695 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 ZBED6P86452 979 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 SCN1BQ07699 218 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 FIP1L1Q6UN15 594 aaKnown RBP4.71□□□□□ -1.66
PTPN13-202ENST00000411767 DNAAF5Q86Y56 855 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 PEX5LQ8IYB4 626 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 PGAM4Q8N0Y7 254 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 SMYD1Q8NB12 490 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 ZNF548Q8NEK5 533 aaPredicted RBP4.71□□□□□ -1.66
PTPN13-202ENST00000411767 TRNT1Q96Q11 434 aaKnown RBP4.71□□□□□ -1.66
PTPN13-202ENST00000411767 NT5C1AQ9BXI3 368 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 THAP9Q9H5L6 903 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 CYP3A43Q9HB55 503 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 TRPV4Q9HBA0 871 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 TUBG2Q9NRH3 451 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 AMACRQ9UHK6 382 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 COG5Q9UP83 839 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 LINC00854A0A1B0GVQ3 168 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 C20orf202A1L168 122 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 CD3EAPO15446 510 aaKnown RBP4.71□□□□□ -1.66
PTPN13-202ENST00000411767 CD2P06729 351 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 ZSCAN20P17040 1043 aaPredicted RBP4.71□□□□□ -1.66
PTPN13-202ENST00000411767 PAX7P23759 505 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 GRK4P32298 578 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 STAT3P40763 770 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 PIK3CGP48736 1102 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 ALDH5A1P51649 535 aaPredicted RBP4.71□□□□□ -1.66
PTPN13-202ENST00000411767 ST8SIA6P61647 398 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 PRKCEQ02156 737 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 RASGEF1BQ0VAM2 473 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 KCNH2Q12809 1159 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 KCNT1Q5JUK3 1230 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 SNRNP48Q6IEG0 339 aaKnown RBP4.71□□□□□ -1.66
PTPN13-202ENST00000411767 ADNP2Q6IQ32 1131 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 UGT3A1Q6NUS8 523 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 TPGS1Q6ZTW0 290 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 TOGARAM2Q6ZUX3 1019 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 CEP97Q8IW35 865 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 RHOT1Q8IXI2 618 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 LAS2Q8IYD9 372 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 ZNF567Q8N184 647 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 CPT1CQ8TCG5 803 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 SPATA5L1Q9BVQ7 753 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 TMEM121BQ9BXQ6 578 aaPredicted RBP4.71□□□□□ -1.66
PTPN13-202ENST00000411767 GPCPD1Q9NPB8 672 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 NLRC4Q9NPP4 1024 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 MRPL22Q9NWU5 206 aaKnown RBP4.71□□□□□ -1.66
PTPN13-202ENST00000411767 GLS2Q9UI32 602 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 CNOT11Q9UKZ1 510 aaKnown RBP4.71□□□□□ -1.66
PTPN13-202ENST00000411767 TBC1D30Q9Y2I9 924 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 PCDHGA11Q9Y5H2 935 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 HMGXB3Q12766 1538 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 A0A0J9YVX5 310 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 MAGEB17A8MXT2 336 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 EEF2KO00418 725 aaKnown RBP4.71□□□□□ -1.66
PTPN13-202ENST00000411767 PODXLO00592 558 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 ZBTB14O43829 449 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 GMFGO60234 142 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 TOM1O60784 492 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 YES1P07947 543 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 ERP29P30040 261 aaKnown RBP4.71□□□□□ -1.66
PTPN13-202ENST00000411767 PTSQ03393 145 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 DMP1Q13316 513 aaPredicted RBP4.71□□□□□ -1.66
PTPN13-202ENST00000411767 BYSLQ13895 437 aaKnown RBP4.71□□□□□ -1.66
PTPN13-202ENST00000411767 ACOX1Q15067 660 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 FAM189A2Q15884 450 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 CA9Q16790 459 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 ME3Q16798 604 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 VPS26BQ4G0F5 336 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 ZC2HC1CQ53FD0 456 aaPredicted RBP4.71□□□□□ -1.66
PTPN13-202ENST00000411767 STRA8Q7Z7C7 330 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 NLRP10Q86W26 655 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 SMYD4Q8IYR2 804 aaPredicted RBP4.71□□□□□ -1.66
PTPN13-202ENST00000411767 CENPLQ8N0S6 344 aaPredicted RBP4.71□□□□□ -1.66
PTPN13-202ENST00000411767 SNX31Q8N9S9 440 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 DAGLBQ8NCG7 672 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 OR4K17Q8NGC6 315 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 MFSD8Q8NHS3 518 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 STOML3Q8TAV4 291 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 RFKQ969G6 155 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 BPIFA2Q96DR5 249 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 TEKT5Q96M29 485 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 THUMPD3Q9BV44 507 aaKnown RBP4.71□□□□□ -1.66
PTPN13-202ENST00000411767 PAG1Q9NWQ8 432 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 STK32BQ9NY57 414 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 FAM153AQ9UHL3 310 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 LRCH1Q9Y2L9 728 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 A0A0G2JN53 185 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 hCG_1984214I3L0E3 225 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 YY2O15391 372 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 SGTAO43765 313 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms