RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 KLK14Q9P0G3 267 aa14.11□□□□□ -0.15
LIMS1-205ENST00000410093 PSMC3IPQ9P2W1 217 aaPredicted RBP14.11□□□□□ -0.15
LIMS1-205ENST00000410093 DSEQ9UL01 958 aa14.11□□□□□ -0.15
LIMS1-205ENST00000410093 GOLGA6L7A0A1B0GV03 622 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 TMEM120BA0PK00 339 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 GCATO75600 419 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 CABYRO75952 493 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 ZBED1O96006 694 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 PDGFRBP09619 1106 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 CCDC130P13994 396 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 ETS1P14921 441 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 BRAFP15056 766 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 DRD4P21917 467 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 LMO2P25791 158 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 PCSK1P29120 753 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 ADORA2BP29275 332 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 L1CAMP32004 1257 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 ARL4AP40617 200 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 YWHAZP63104 245 aaKnown RBP14.1□□□□□ -0.15
LIMS1-205ENST00000410093 MRPS5P82675 430 aaKnown RBP14.1□□□□□ -0.15
LIMS1-205ENST00000410093 PALM2Q8IXS6 379 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 OTUD6BQ8N6M0 293 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 FAM71DQ8N9W8 422 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 PCSK9Q8NBP7 692 aaKnown RBP14.1□□□□□ -0.15
LIMS1-205ENST00000410093 DIS3LQ8TF46 1054 aaKnown RBP14.1□□□□□ -0.15
LIMS1-205ENST00000410093 PPM1EQ8WY54 764 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 MAML1Q92585 1016 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 LENG1Q96BZ8 264 aaPredicted RBP14.1□□□□□ -0.15
LIMS1-205ENST00000410093 GRAMD1AQ96CP6 724 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 CABS1Q96KC9 395 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 CXCL16Q9H2A7 254 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 NRDE2Q9H7Z3 1164 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 VPS37BQ9H9H4 285 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 LRRC4Q9HBW1 653 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 SAMD15Q9P1V8 674 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 XPO7Q9UIA9 1087 aaKnown RBP14.1□□□□□ -0.15
LIMS1-205ENST00000410093 CDH9Q9ULB4 789 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 CLUHO75153 1309 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 C9IYK1 514 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 RASA4BC9J798 803 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 RASA4O43374 803 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 GRAP2O75791 330 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 MYCNP04198 464 aaPredicted RBP14.1□□□□□ -0.15
LIMS1-205ENST00000410093 FAM200BP0CF97 657 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 GDF10P55107 478 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 SARNPP82979 210 aaKnown RBP14.1□□□□□ -0.15
LIMS1-205ENST00000410093 CDK16Q00536 496 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 SOX4Q06945 474 aaPredicted RBP14.1□□□□□ -0.15
LIMS1-205ENST00000410093 MGAT3Q09327 533 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 KCNJ11Q14654 390 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 TAF5Q15542 800 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 SLC45A4Q5BKX6 768 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 SH3PXD2AQ5TCZ1 1133 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 LHX8Q68G74 356 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 C6orf89Q6UWU4 347 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 PDZD4Q76G19 769 aaPredicted RBP14.1□□□□□ -0.15
LIMS1-205ENST00000410093 BNIPLQ7Z465 357 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 PIGWQ7Z7B1 504 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 TRABD2AQ86V40 505 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 PIGZQ86VD9 579 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 FUKQ8N0W3 1084 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 SIX6OS1Q8N1H7 587 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 SCML4Q8N228 414 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 TMEM130Q8N3G9 435 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 PQLC3Q8N755 202 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 ARRDC4Q8NCT1 418 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 CCDC197Q8NCU1 140 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 PCDH19Q8TAB3 1148 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 MDM1Q8TC05 714 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 PIWIL1Q96J94 861 aaKnown RBP14.1□□□□□ -0.15
LIMS1-205ENST00000410093 SEC16BQ96JE7 1060 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 SENP8Q96LD8 212 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 ACSS3Q9H6R3 686 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 ACTR5Q9H9F9 607 aaPredicted RBP14.1□□□□□ -0.15
LIMS1-205ENST00000410093 USP29Q9HBJ7 922 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 CNGB3Q9NQW8 809 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 AP4E1Q9UPM8 1137 aa14.1□□□□□ -0.15
LIMS1-205ENST00000410093 FAM47DPA6NHR8 397 aa14.09□□□□□ -0.15
LIMS1-205ENST00000410093 H3BRJ5 948 aa14.09□□□□□ -0.15
LIMS1-205ENST00000410093 TRDMT1O14717 391 aaKnown RBP14.09□□□□□ -0.15
LIMS1-205ENST00000410093 GABBR2O75899 941 aa14.09□□□□□ -0.15
LIMS1-205ENST00000410093 STK10O94804 968 aaKnown RBP14.09□□□□□ -0.15
LIMS1-205ENST00000410093 LCP1P13796 627 aa14.09□□□□□ -0.15
LIMS1-205ENST00000410093 TPSB2P20231 275 aa14.09□□□□□ -0.15
LIMS1-205ENST00000410093 CYP2F1P24903 491 aa14.09□□□□□ -0.15
LIMS1-205ENST00000410093 GBP2P32456 591 aaPredicted RBP14.09□□□□□ -0.15
LIMS1-205ENST00000410093 BASP1P80723 227 aaKnown RBP14.09□□□□□ -0.15
LIMS1-205ENST00000410093 IL9RQ01113 521 aa14.09□□□□□ -0.15
LIMS1-205ENST00000410093 MMRN1Q13201 1228 aa14.09□□□□□ -0.15
LIMS1-205ENST00000410093 TPSAB1Q15661 275 aa14.09□□□□□ -0.15
LIMS1-205ENST00000410093 MAPRE1Q15691 268 aaKnown RBP14.09□□□□□ -0.15
LIMS1-205ENST00000410093 KCTD19Q17RG1 926 aaPredicted RBP14.09□□□□□ -0.15
LIMS1-205ENST00000410093 VSTM1Q6UX27 236 aa14.09□□□□□ -0.15
LIMS1-205ENST00000410093 METTL23Q86XA0 190 aa14.09□□□□□ -0.15
LIMS1-205ENST00000410093 TRPV1Q8NER1 839 aa14.09□□□□□ -0.15
LIMS1-205ENST00000410093 CKAP2Q8WWK9 683 aa14.09□□□□□ -0.15
LIMS1-205ENST00000410093 IRGQQ8WZA9 623 aa14.09□□□□□ -0.15
LIMS1-205ENST00000410093 MAGEB18Q96M61 343 aa14.09□□□□□ -0.15
LIMS1-205ENST00000410093 SLC2A13Q96QE2 648 aa14.09□□□□□ -0.15
LIMS1-205ENST00000410093 SMC6Q96SB8 1091 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms