RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 L1CAMP32004 1257 aa16.48■□□□□ 0.23
HOXD3-202ENST00000410016 DPYSL2Q16555 572 aa16.48■□□□□ 0.23
HOXD3-202ENST00000410016 ZNF792Q3KQV3 632 aa16.48■□□□□ 0.23
HOXD3-202ENST00000410016 PPP6R3Q5H9R7 873 aaPredicted RBP16.48■□□□□ 0.23
HOXD3-202ENST00000410016 FASTKD5Q7L8L6 764 aaKnown RBP16.48■□□□□ 0.23
HOXD3-202ENST00000410016 SESTD1Q86VW0 696 aa16.48■□□□□ 0.23
HOXD3-202ENST00000410016 CTAGE3PQ8IX95 158 aa16.48■□□□□ 0.23
HOXD3-202ENST00000410016 SHCBP1Q8NEM2 672 aa16.48■□□□□ 0.23
HOXD3-202ENST00000410016 CENPIQ92674 756 aaPredicted RBP16.48■□□□□ 0.23
HOXD3-202ENST00000410016 EMID1Q96A84 441 aaPredicted RBP16.48■□□□□ 0.23
HOXD3-202ENST00000410016 OPTNQ96CV9 577 aa16.48■□□□□ 0.23
HOXD3-202ENST00000410016 LRRC39Q96DD0 335 aa16.48■□□□□ 0.23
HOXD3-202ENST00000410016 PTCD3Q96EY7 689 aaKnown RBP16.48■□□□□ 0.23
HOXD3-202ENST00000410016 SIGLEC10Q96LC7 697 aa16.48■□□□□ 0.23
HOXD3-202ENST00000410016 LPIN3Q9BQK8 851 aa16.48■□□□□ 0.23
HOXD3-202ENST00000410016 MTMR10Q9NXD2 777 aa16.48■□□□□ 0.23
HOXD3-202ENST00000410016 SLC5A4Q9NY91 659 aa16.48■□□□□ 0.23
HOXD3-202ENST00000410016 PLLPQ9Y342 182 aa16.48■□□□□ 0.23
HOXD3-202ENST00000410016 ZSWIM8A7E2V4 1837 aa16.47■□□□□ 0.23
HOXD3-202ENST00000410016 H3BRB1 525 aa16.47■□□□□ 0.23
HOXD3-202ENST00000410016 UGT1A9O60656 530 aa16.47■□□□□ 0.23
HOXD3-202ENST00000410016 HNRNPCL1O60812 293 aaKnown RBP16.47■□□□□ 0.23
HOXD3-202ENST00000410016 GCATO75600 419 aa16.47■□□□□ 0.23
HOXD3-202ENST00000410016 KRT37O76014 449 aa16.47■□□□□ 0.23
HOXD3-202ENST00000410016 APOEP02649 317 aa16.47■□□□□ 0.23
HOXD3-202ENST00000410016 CALB2P22676 271 aa16.47■□□□□ 0.23
HOXD3-202ENST00000410016 CYP2F1P24903 491 aa16.47■□□□□ 0.23
HOXD3-202ENST00000410016 ARFIP2P53365 341 aa16.47■□□□□ 0.23
HOXD3-202ENST00000410016 ATXN1P54253 815 aaKnown RBP16.47■□□□□ 0.23
HOXD3-202ENST00000410016 MRPS5P82675 430 aaKnown RBP16.47■□□□□ 0.23
HOXD3-202ENST00000410016 GBE1Q04446 702 aa16.47■□□□□ 0.23
HOXD3-202ENST00000410016 UNC5AQ6ZN44 842 aa16.47■□□□□ 0.23
HOXD3-202ENST00000410016 MAB21L3Q8N8X9 362 aa16.47■□□□□ 0.23
HOXD3-202ENST00000410016 RSRC1Q96IZ7 334 aaKnown RBP16.47■□□□□ 0.23
HOXD3-202ENST00000410016 TRIM56Q9BRZ2 755 aaKnown RBP16.47■□□□□ 0.23
HOXD3-202ENST00000410016 DENND2DQ9H6A0 471 aaPredicted RBP16.47■□□□□ 0.23
HOXD3-202ENST00000410016 TUT1Q9H6E5 874 aaKnown RBP16.47■□□□□ 0.23
HOXD3-202ENST00000410016 UGT1A7Q9HAW7 530 aa16.47■□□□□ 0.23
HOXD3-202ENST00000410016 UGT1A10Q9HAW8 530 aa16.47■□□□□ 0.23
HOXD3-202ENST00000410016 UGT1A8Q9HAW9 530 aa16.47■□□□□ 0.23
HOXD3-202ENST00000410016 ARL8BQ9NVJ2 186 aa16.47■□□□□ 0.23
HOXD3-202ENST00000410016 HESX1Q9UBX0 185 aa16.47■□□□□ 0.23
HOXD3-202ENST00000410016 GTF2IRD1Q9UHL9 959 aa16.47■□□□□ 0.23
HOXD3-202ENST00000410016 MTO1Q9Y2Z2 717 aaKnown RBP16.47■□□□□ 0.23
HOXD3-202ENST00000410016 RBM47A0AV96 593 aaKnown RBP16.46■□□□□ 0.23
HOXD3-202ENST00000410016 HMX2A2RU54 273 aa16.46■□□□□ 0.23
HOXD3-202ENST00000410016 COPEO14579 308 aa16.46■□□□□ 0.23
HOXD3-202ENST00000410016 SERPINB3P29508 390 aa16.46■□□□□ 0.23
HOXD3-202ENST00000410016 ANKRD20A2Q5SQ80 823 aa16.46■□□□□ 0.23
HOXD3-202ENST00000410016 ANKRD20A1Q5TYW2 823 aa16.46■□□□□ 0.23
HOXD3-202ENST00000410016 ANKRD20A3Q5VUR7 823 aa16.46■□□□□ 0.23
HOXD3-202ENST00000410016 ZDHHC17Q8IUH5 632 aa16.46■□□□□ 0.23
HOXD3-202ENST00000410016 CLEC4CQ8WTT0 213 aa16.46■□□□□ 0.23
HOXD3-202ENST00000410016 PRR11Q96HE9 360 aaPredicted RBP16.46■□□□□ 0.23
HOXD3-202ENST00000410016 TMEM120AQ9BXJ8 343 aa16.46■□□□□ 0.23
HOXD3-202ENST00000410016 KATNBL1Q9H079 304 aa16.46■□□□□ 0.23
HOXD3-202ENST00000410016 PLEKHA5Q9HAU0 1116 aa16.46■□□□□ 0.23
HOXD3-202ENST00000410016 FBXO6Q9NRD1 293 aaPredicted RBP16.46■□□□□ 0.23
HOXD3-202ENST00000410016 SCN1AP35498 2009 aa16.46■□□□□ 0.23
HOXD3-202ENST00000410016 TPBGLP0DKB5 382 aa16.46■□□□□ 0.23
HOXD3-202ENST00000410016 CCNFP41002 786 aa16.46■□□□□ 0.23
HOXD3-202ENST00000410016 ADCYAP1R1P41586 468 aa16.46■□□□□ 0.23
HOXD3-202ENST00000410016 PTPN9P43378 593 aa16.46■□□□□ 0.23
HOXD3-202ENST00000410016 CDK16Q00536 496 aa16.46■□□□□ 0.23
HOXD3-202ENST00000410016 WASHC2DQ5SRD0 308 aa16.46■□□□□ 0.23
HOXD3-202ENST00000410016 TRMT10BQ6PF06 316 aaKnown RBP16.46■□□□□ 0.23
HOXD3-202ENST00000410016 CADM1Q9BY67 442 aaKnown RBP16.46■□□□□ 0.23
HOXD3-202ENST00000410016 SNTG2Q9NY99 539 aa16.46■□□□□ 0.23
HOXD3-202ENST00000410016 RPL26L1Q9UNX3 145 aaKnown RBP16.46■□□□□ 0.23
HOXD3-202ENST00000410016 DERAQ9Y315 318 aa16.46■□□□□ 0.23
HOXD3-202ENST00000410016 HCRTO43612 131 aa16.45■□□□□ 0.22
HOXD3-202ENST00000410016 CSH1P0DML2 217 aa16.45■□□□□ 0.22
HOXD3-202ENST00000410016 CSH2P0DML3 217 aa16.45■□□□□ 0.22
HOXD3-202ENST00000410016 CYP2C8P10632 490 aa16.45■□□□□ 0.22
HOXD3-202ENST00000410016 SOWAHAQ2M3V2 549 aa16.45■□□□□ 0.22
HOXD3-202ENST00000410016 HSF5Q4G112 596 aaPredicted RBP16.45■□□□□ 0.22
HOXD3-202ENST00000410016 CES4AQ5XG92 561 aa16.45■□□□□ 0.22
HOXD3-202ENST00000410016 ARHGAP17Q68EM7 881 aa16.45■□□□□ 0.22
HOXD3-202ENST00000410016 C4orf22Q6V702 233 aa16.45■□□□□ 0.22
HOXD3-202ENST00000410016 MPP5Q8N3R9 675 aa16.45■□□□□ 0.22
HOXD3-202ENST00000410016 ENDOVQ8N8Q3 282 aaKnown RBP16.45■□□□□ 0.22
HOXD3-202ENST00000410016 EBNA1BP2Q99848 306 aaKnown RBP16.45■□□□□ 0.22
HOXD3-202ENST00000410016 DPEP3Q9H4B8 488 aa16.45■□□□□ 0.22
HOXD3-202ENST00000410016 TUBGCP4Q9UGJ1 667 aa16.45■□□□□ 0.22
HOXD3-202ENST00000410016 GJD2Q9UKL4 321 aa16.45■□□□□ 0.22
HOXD3-202ENST00000410016 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.45■□□□□ 0.22
HOXD3-202ENST00000410016 C2orf71A6NGG8 1288 aa16.45■□□□□ 0.22
HOXD3-202ENST00000410016 FAM159BA6NKW6 160 aa16.45■□□□□ 0.22
HOXD3-202ENST00000410016 CCDC22O60826 627 aa16.45■□□□□ 0.22
HOXD3-202ENST00000410016 HAUS5O94927 633 aa16.45■□□□□ 0.22
HOXD3-202ENST00000410016 GSTA2P09210 222 aa16.45■□□□□ 0.22
HOXD3-202ENST00000410016 GRIA1P42261 906 aa16.45■□□□□ 0.22
HOXD3-202ENST00000410016 RPL34P49207 117 aaKnown RBP16.45■□□□□ 0.22
HOXD3-202ENST00000410016 SLC8A3P57103 927 aa16.45■□□□□ 0.22
HOXD3-202ENST00000410016 GRIK4Q16099 956 aa16.45■□□□□ 0.22
HOXD3-202ENST00000410016 ZNF410Q86VK4 478 aa16.45■□□□□ 0.22
HOXD3-202ENST00000410016 CDKL3Q8IVW4 592 aaPredicted RBP16.45■□□□□ 0.22
HOXD3-202ENST00000410016 VPS52Q8N1B4 723 aa16.45■□□□□ 0.22
HOXD3-202ENST00000410016 C18orf25Q96B23 403 aaPredicted RBP16.45■□□□□ 0.22
HOXD3-202ENST00000410016 CDCA5Q96FF9 252 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms