RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 C3orf20Q8ND61 904 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 PGLYRP2Q96PD5 576 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 SENP6Q9GZR1 1112 aaPredicted RBP9.36□□□□□ -0.91
PBRM1-208ENST00000410007 NEUROG2Q9H2A3 272 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 POPDC2Q9HBU9 364 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 RNF112Q9ULX5 631 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 SHOC2Q9UQ13 582 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 USP20Q9Y2K6 914 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 ATRNO75882 1429 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 SUPT7LO94864 414 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 ENDOD1O94919 500 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 GLP2RO95838 553 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 LTFP02788 710 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 LSP1P33241 339 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 CSE1LP55060 971 aaKnown RBP9.36□□□□□ -0.91
PBRM1-208ENST00000410007 AASDHQ4L235 1098 aaPredicted RBP9.36□□□□□ -0.91
PBRM1-208ENST00000410007 SLC39A12Q504Y0 691 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 SGO1Q5FBB7 561 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 PPM1LQ5SGD2 360 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 SLC26A11Q86WA9 606 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 RFWD2Q8NHY2 731 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 APBB2Q92870 758 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 ATP13A1Q9HD20 1204 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 C3P01024 1663 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 ZSCAN9O15535 394 aaPredicted RBP9.36□□□□□ -0.91
PBRM1-208ENST00000410007 PGK1P00558 417 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 RBP1P09455 135 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 ATP6V1E1P36543 226 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 PEX19P40855 299 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 TUBP50607 506 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 CDH17Q12864 832 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 SLC9A9Q8IVB4 645 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 FAM9CQ8IZT9 166 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 NUP93Q8N1F7 819 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 TMEM161BQ8NDZ6 487 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 ERP27Q96DN0 273 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 RBBP8Q99708 897 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 EIF2AQ9BY44 585 aaKnown RBP9.36□□□□□ -0.91
PBRM1-208ENST00000410007 MAF1Q9H063 256 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 IARS2Q9NSE4 1012 aaKnown RBP9.36□□□□□ -0.91
PBRM1-208ENST00000410007 SLC24A2Q9UI40 661 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 ARHGAP26Q9UNA1 814 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 MRC1P22897 1456 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 BCL9LQ86UU0 1499 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 SLIT3O75094 1523 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 GLTPD2A6NH11 291 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 OR1E1P30953 314 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 SCNN1GP51170 649 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 PTENP60484 403 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 MGAT5Q09328 741 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 LRRC74AQ0VAA2 488 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 MPP3Q13368 585 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 KBTBD12Q3ZCT8 623 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 KIAA0319LQ8IZA0 1049 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 FBXO25Q8TCJ0 367 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 ZNF558Q96NG5 402 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 FAM111AQ96PZ2 611 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 APOL2Q9BQE5 337 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 PRKD2Q9BZL6 878 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 CCDC90BQ9GZT6 254 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 DDX3XO00571 662 aaKnown RBP eCLIP9.35□□□□□ -0.91
PBRM1-208ENST00000410007 CES2O00748 559 aa9.35□□□□□ -0.91
PBRM1-208ENST00000410007 ADCY6O43306 1168 aa9.35□□□□□ -0.91
PBRM1-208ENST00000410007 CBWD6Q4V339 395 aa9.35□□□□□ -0.91
PBRM1-208ENST00000410007 CBWD3Q5JTY5 395 aa9.35□□□□□ -0.91
PBRM1-208ENST00000410007 CBWD5Q5RIA9 395 aa9.35□□□□□ -0.91
PBRM1-208ENST00000410007 ARID3BQ8IVW6 561 aaPredicted RBP9.35□□□□□ -0.91
PBRM1-208ENST00000410007 SCUBE3Q8IX30 993 aa9.35□□□□□ -0.91
PBRM1-208ENST00000410007 ABCC13Q9NSE7 274 aa9.35□□□□□ -0.91
PBRM1-208ENST00000410007 SPASTQ9UBP0 616 aa9.35□□□□□ -0.91
PBRM1-208ENST00000410007 ACOT9Q9Y305 439 aa9.35□□□□□ -0.91
PBRM1-208ENST00000410007 LRRC10BA6NIK2 292 aa9.35□□□□□ -0.91
PBRM1-208ENST00000410007 HACD1B0YJ81 288 aa9.35□□□□□ -0.91
PBRM1-208ENST00000410007 PTPN1P18031 435 aaKnown RBP9.35□□□□□ -0.91
PBRM1-208ENST00000410007 ITGB5P18084 799 aa9.35□□□□□ -0.91
PBRM1-208ENST00000410007 CYP2C18P33260 490 aa9.35□□□□□ -0.91
PBRM1-208ENST00000410007 RAP1GDS1P52306 607 aa9.35□□□□□ -0.91
PBRM1-208ENST00000410007 HPCAP84074 193 aa9.35□□□□□ -0.91
PBRM1-208ENST00000410007 MAP3K10Q02779 954 aa9.35□□□□□ -0.91
PBRM1-208ENST00000410007 MED21Q13503 144 aa9.35□□□□□ -0.91
PBRM1-208ENST00000410007 CNGA2Q16280 664 aa9.35□□□□□ -0.91
PBRM1-208ENST00000410007 FAM110CQ1W6H9 321 aa9.35□□□□□ -0.91
PBRM1-208ENST00000410007 PRAMEF19Q5SWL8 479 aa9.35□□□□□ -0.91
PBRM1-208ENST00000410007 CCDC149Q6ZUS6 474 aa9.35□□□□□ -0.91
PBRM1-208ENST00000410007 TMEM199Q8N511 208 aa9.35□□□□□ -0.91
PBRM1-208ENST00000410007 CCDC33Q8N5R6 958 aa9.35□□□□□ -0.91
PBRM1-208ENST00000410007 HSFY1Q96LI6 401 aa9.35□□□□□ -0.91
PBRM1-208ENST00000410007 VAT1Q99536 393 aa9.35□□□□□ -0.91
PBRM1-208ENST00000410007 PDGFDQ9GZP0 370 aaPredicted RBP9.35□□□□□ -0.91
PBRM1-208ENST00000410007 LNPEPQ9UIQ6 1025 aa9.35□□□□□ -0.91
PBRM1-208ENST00000410007 VANGL2Q9ULK5 521 aa9.35□□□□□ -0.91
PBRM1-208ENST00000410007 EIF3LQ9Y262 564 aaKnown RBP9.35□□□□□ -0.91
PBRM1-208ENST00000410007 PCDHA3Q9Y5H8 950 aa9.35□□□□□ -0.91
PBRM1-208ENST00000410007 SMIM22K7EJ46 135 aa9.35□□□□□ -0.91
PBRM1-208ENST00000410007 BDNFP23560 247 aa9.35□□□□□ -0.91
PBRM1-208ENST00000410007 MLH1P40692 756 aa9.35□□□□□ -0.91
PBRM1-208ENST00000410007 CRYBB1P53674 252 aaPredicted RBP9.35□□□□□ -0.91
PBRM1-208ENST00000410007 RAD23BP54727 409 aa9.35□□□□□ -0.91
PBRM1-208ENST00000410007 STX5Q13190 355 aa9.35□□□□□ -0.91
PBRM1-208ENST00000410007 CACHD1Q5VU97 1274 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms