RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 BOLA3Q53S33 107 aa12.97□□□□□ -0.33
CHMP3-204ENST00000409727 ERMARDQ5T6L9 678 aa12.97□□□□□ -0.33
CHMP3-204ENST00000409727 DENND5BQ6ZUT9 1274 aa12.97□□□□□ -0.33
CHMP3-204ENST00000409727 SCD5Q86SK9 330 aa12.97□□□□□ -0.33
CHMP3-204ENST00000409727 RFX6Q8HWS3 928 aa12.97□□□□□ -0.33
CHMP3-204ENST00000409727 CMASQ8NFW8 434 aaPredicted RBP12.97□□□□□ -0.33
CHMP3-204ENST00000409727 ANKRD7Q92527 254 aa12.97□□□□□ -0.33
CHMP3-204ENST00000409727 NT5C3BQ969T7 300 aa12.97□□□□□ -0.33
CHMP3-204ENST00000409727 NMUR1Q9HB89 426 aa12.97□□□□□ -0.33
CHMP3-204ENST00000409727 CYP4F11Q9HBI6 524 aa12.97□□□□□ -0.33
CHMP3-204ENST00000409727 MRPL17Q9NRX2 175 aaKnown RBP12.97□□□□□ -0.33
CHMP3-204ENST00000409727 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.97□□□□□ -0.33
CHMP3-204ENST00000409727 GMIPQ9P107 970 aa12.97□□□□□ -0.33
CHMP3-204ENST00000409727 AP4E1Q9UPM8 1137 aa12.97□□□□□ -0.33
CHMP3-204ENST00000409727 SEC24AO95486 1093 aa12.97□□□□□ -0.33
CHMP3-204ENST00000409727 MYOGP15173 224 aa12.97□□□□□ -0.33
CHMP3-204ENST00000409727 ATF6P18850 670 aa12.97□□□□□ -0.33
CHMP3-204ENST00000409727 DR1Q01658 176 aa12.97□□□□□ -0.33
CHMP3-204ENST00000409727 DPYSL3Q14195 570 aa12.97□□□□□ -0.33
CHMP3-204ENST00000409727 GLE1Q53GS7 698 aaKnown RBP12.97□□□□□ -0.33
CHMP3-204ENST00000409727 CCDC137Q6PK04 289 aaKnown RBP12.97□□□□□ -0.33
CHMP3-204ENST00000409727 TAC4Q86UU9 113 aa12.97□□□□□ -0.33
CHMP3-204ENST00000409727 GSPT2Q8IYD1 628 aaKnown RBP12.97□□□□□ -0.33
CHMP3-204ENST00000409727 CCDC105Q8IYK2 499 aa12.97□□□□□ -0.33
CHMP3-204ENST00000409727 PYROXD2Q8N2H3 581 aa12.97□□□□□ -0.33
CHMP3-204ENST00000409727 C2orf15Q8WU43 125 aaKnown RBP12.97□□□□□ -0.33
CHMP3-204ENST00000409727 MAIP1Q8WWC4 291 aa12.97□□□□□ -0.33
CHMP3-204ENST00000409727 FBXO32Q969P5 355 aa12.97□□□□□ -0.33
CHMP3-204ENST00000409727 TRIM51Q9BSJ1 452 aa12.97□□□□□ -0.33
CHMP3-204ENST00000409727 MAK16Q9BXY0 300 aaKnown RBP12.97□□□□□ -0.33
CHMP3-204ENST00000409727 MTIF3Q9H2K0 278 aaKnown RBP12.97□□□□□ -0.33
CHMP3-204ENST00000409727 FBXO44Q9H4M3 255 aa12.97□□□□□ -0.33
CHMP3-204ENST00000409727 SLITRK6Q9H5Y7 841 aa12.97□□□□□ -0.33
CHMP3-204ENST00000409727 OSER1Q9NX31 292 aa12.97□□□□□ -0.33
CHMP3-204ENST00000409727 STIM2Q9P246 746 aa12.97□□□□□ -0.33
CHMP3-204ENST00000409727 SAE1Q9UBE0 346 aaPredicted RBP12.97□□□□□ -0.33
CHMP3-204ENST00000409727 MYO16Q9Y6X6 1858 aa12.97□□□□□ -0.33
CHMP3-204ENST00000409727 LAMA2P24043 3122 aaKnown RBP12.96□□□□□ -0.33
CHMP3-204ENST00000409727 TARSL2A2RTX5 802 aaKnown RBP12.96□□□□□ -0.33
CHMP3-204ENST00000409727 GRXCR1A8MXD5 290 aa12.96□□□□□ -0.33
CHMP3-204ENST00000409727 CST8O60676 142 aa12.96□□□□□ -0.33
CHMP3-204ENST00000409727 SPATA31D3P0C874 917 aa12.96□□□□□ -0.33
CHMP3-204ENST00000409727 YWHAQP27348 245 aa12.96□□□□□ -0.33
CHMP3-204ENST00000409727 CHRNA3P32297 505 aa12.96□□□□□ -0.33
CHMP3-204ENST00000409727 CTNNB1P35222 781 aa12.96□□□□□ -0.33
CHMP3-204ENST00000409727 RPL10AP62906 217 aaKnown RBP12.96□□□□□ -0.33
CHMP3-204ENST00000409727 C9orf50Q5SZB4 431 aa12.96□□□□□ -0.33
CHMP3-204ENST00000409727 SPATA31D4Q6ZUB0 917 aa12.96□□□□□ -0.33
CHMP3-204ENST00000409727 SPRED2Q7Z698 418 aa12.96□□□□□ -0.33
CHMP3-204ENST00000409727 SCML4Q8N228 414 aa12.96□□□□□ -0.33
CHMP3-204ENST00000409727 CCDC26Q8TAB7 109 aa12.96□□□□□ -0.33
CHMP3-204ENST00000409727 ZNF461Q8TAF7 563 aa12.96□□□□□ -0.33
CHMP3-204ENST00000409727 TEKT4Q8WW24 435 aa12.96□□□□□ -0.33
CHMP3-204ENST00000409727 RNF34Q969K3 372 aa12.96□□□□□ -0.33
CHMP3-204ENST00000409727 CCDC114Q96M63 670 aa12.96□□□□□ -0.33
CHMP3-204ENST00000409727 NCAPGQ9BPX3 1015 aa12.96□□□□□ -0.33
CHMP3-204ENST00000409727 TRIM31Q9BZY9 425 aa12.96□□□□□ -0.33
CHMP3-204ENST00000409727 DCLK3Q9C098 648 aa12.96□□□□□ -0.33
CHMP3-204ENST00000409727 PCDH18Q9HCL0 1135 aa12.96□□□□□ -0.33
CHMP3-204ENST00000409727 EPB41L5Q9HCM4 733 aa12.96□□□□□ -0.33
CHMP3-204ENST00000409727 ALG13Q9NP73 1137 aaKnown RBP12.96□□□□□ -0.33
CHMP3-204ENST00000409727 ABCC13Q9NSE7 274 aa12.96□□□□□ -0.33
CHMP3-204ENST00000409727 SFMBT1Q9UHJ3 866 aa12.96□□□□□ -0.33
CHMP3-204ENST00000409727 SCML2Q9UQR0 700 aa12.96□□□□□ -0.33
CHMP3-204ENST00000409727 MDM4O15151 490 aa12.95□□□□□ -0.34
CHMP3-204ENST00000409727 MSI1O43347 362 aaKnown RBP12.95□□□□□ -0.34
CHMP3-204ENST00000409727 COILP38432 576 aaPredicted RBP12.95□□□□□ -0.34
CHMP3-204ENST00000409727 TAF10Q12962 218 aa12.95□□□□□ -0.34
CHMP3-204ENST00000409727 TRADDQ15628 312 aa12.95□□□□□ -0.34
CHMP3-204ENST00000409727 PPP2R5EQ16537 467 aa12.95□□□□□ -0.34
CHMP3-204ENST00000409727 MAP7D3Q8IWC1 876 aa12.95□□□□□ -0.34
CHMP3-204ENST00000409727 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.95□□□□□ -0.34
CHMP3-204ENST00000409727 DQX1Q8TE96 717 aaKnown RBP12.95□□□□□ -0.34
CHMP3-204ENST00000409727 RNF139Q8WU17 664 aa12.95□□□□□ -0.34
CHMP3-204ENST00000409727 IFT81Q8WYA0 676 aa12.95□□□□□ -0.34
CHMP3-204ENST00000409727 CLP1Q92989 425 aaKnown RBP12.95□□□□□ -0.34
CHMP3-204ENST00000409727 ABHD8Q96I13 439 aa12.95□□□□□ -0.34
CHMP3-204ENST00000409727 ANLNQ9NQW6 1124 aa12.95□□□□□ -0.34
CHMP3-204ENST00000409727 ARGLU1Q9NWB6 273 aaPredicted RBP12.95□□□□□ -0.34
CHMP3-204ENST00000409727 AFF4Q9UHB7 1163 aaKnown RBP12.95□□□□□ -0.34
CHMP3-204ENST00000409727 FZD10Q9ULW2 581 aa12.95□□□□□ -0.34
CHMP3-204ENST00000409727 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.95□□□□□ -0.34
CHMP3-204ENST00000409727 CARNS1A5YM72 827 aa12.95□□□□□ -0.34
CHMP3-204ENST00000409727 SLC38A8A6NNN8 435 aa12.95□□□□□ -0.34
CHMP3-204ENST00000409727 PRRG1O14668 218 aa12.95□□□□□ -0.34
CHMP3-204ENST00000409727 TEX28O15482 410 aa12.95□□□□□ -0.34
CHMP3-204ENST00000409727 ENDOD1O94919 500 aa12.95□□□□□ -0.34
CHMP3-204ENST00000409727 ABLIM3O94929 683 aa12.95□□□□□ -0.34
CHMP3-204ENST00000409727 RTN3O95197 1032 aaPredicted RBP12.95□□□□□ -0.34
CHMP3-204ENST00000409727 ATF2P15336 505 aa12.95□□□□□ -0.34
CHMP3-204ENST00000409727 L1CAMP32004 1257 aa12.95□□□□□ -0.34
CHMP3-204ENST00000409727 PTPN7P35236 360 aa12.95□□□□□ -0.34
CHMP3-204ENST00000409727 TUFMP49411 452 aaKnown RBP12.95□□□□□ -0.34
CHMP3-204ENST00000409727 ARSEP51690 589 aa12.95□□□□□ -0.34
CHMP3-204ENST00000409727 CLCN6P51797 869 aa12.95□□□□□ -0.34
CHMP3-204ENST00000409727 PDK2Q15119 407 aa12.95□□□□□ -0.34
CHMP3-204ENST00000409727 CYP1B1Q16678 543 aa12.95□□□□□ -0.34
CHMP3-204ENST00000409727 COL13A1Q5TAT6 717 aaPredicted RBP12.95□□□□□ -0.34
CHMP3-204ENST00000409727 FAM109BQ6ICB4 259 aaPredicted RBP12.95□□□□□ -0.34
CHMP3-204ENST00000409727 SND1Q7KZF4 910 aaKnown RBP eCLIP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms