RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 CUL1Q13616 776 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 TRIM29Q14134 588 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 SPIDRQ14159 915 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 TRIM25Q14258 630 aaKnown RBP5.8□□□□□ -1.48
CLK1-202ENST00000409403 STILQ15468 1287 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 SPA17Q15506 151 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 MLANAQ16655 118 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 MUM1Q2TAK8 710 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 CFAP221Q4G0U5 840 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 TBC1D10BQ4KMP7 808 aaPredicted RBP5.8□□□□□ -1.48
CLK1-202ENST00000409403 ODF2Q5BJF6 829 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 KANK2Q63ZY3 851 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 KCTD16Q68DU8 428 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 IRGCQ6NXR0 463 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 RINLQ6ZS11 566 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 G2E3Q7L622 706 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 C14orf80Q86SX3 495 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 AACSQ86V21 672 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 HOOK3Q86VS8 718 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 LYSMD2Q8IV50 215 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 TPH2Q8IWU9 490 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 CNBD1Q8NA66 436 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 OR14C36Q8NHC7 312 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 TBC1D5Q92609 795 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 RRP36Q96EU6 259 aaKnown RBP5.8□□□□□ -1.48
CLK1-202ENST00000409403 COG3Q96JB2 828 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 C11orf84Q9BUA3 381 aaPredicted RBP5.8□□□□□ -1.48
CLK1-202ENST00000409403 MIS12Q9H081 205 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 RAB17Q9H0T7 212 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 STMN4Q9H169 189 aaPredicted RBP5.8□□□□□ -1.48
CLK1-202ENST00000409403 RANBP17Q9H2T7 1088 aaKnown RBP5.8□□□□□ -1.48
CLK1-202ENST00000409403 PRDM12Q9H4Q4 367 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 RMI1Q9H9A7 625 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 PRDM16Q9HAZ2 1276 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 GDF3Q9NR23 364 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 KCMF1Q9P0J7 381 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 SLC12A6Q9UHW9 1150 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 PRSS50Q9UI38 385 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 RPL26L1Q9UNX3 145 aaKnown RBP5.8□□□□□ -1.48
CLK1-202ENST00000409403 C2CD2Q9Y426 696 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 DCHS1Q96JQ0 3298 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 CHD6Q8TD26 2715 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 SMIM22K7EJ46 135 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 O00370 1275 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 OPHN1O60890 802 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 ATP5HO75947 161 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 KRT14P02533 472 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 HOXB7P09629 217 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 DRD4P21917 467 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 PDIA3P30101 505 aaKnown RBP5.79□□□□□ -1.48
CLK1-202ENST00000409403 PCK1P35558 622 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 GNAQP50148 359 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 EPHB3P54753 998 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 TNNC1P63316 161 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 MRPS25P82663 173 aaKnown RBP5.79□□□□□ -1.48
CLK1-202ENST00000409403 FOXO4P98177 505 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 CDK17Q00537 523 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 SP3Q02447 781 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 TCIRG1Q13488 830 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 MCMDC2Q4G0Z9 681 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 CCDC92Q53HC0 331 aaPredicted RBP5.79□□□□□ -1.48
CLK1-202ENST00000409403 PHF19Q5T6S3 580 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 MBNL2Q5VZF2 373 aaKnown RBP5.79□□□□□ -1.48
CLK1-202ENST00000409403 HAUS3Q68CZ6 603 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 SHC4Q6S5L8 630 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 CCDC80Q76M96 950 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 CXXC5Q7LFL8 322 aaKnown RBP5.79□□□□□ -1.48
CLK1-202ENST00000409403 TRPM8Q7Z2W7 1104 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 STK32CQ86UX6 486 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 SLC41A1Q8IVJ1 513 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 STPG3Q8N7X2 389 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 CDYL2Q8N8U2 506 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 TTC8Q8TAM2 541 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 KIFAP3Q92845 792 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 DCPSQ96C86 337 aaKnown RBP5.79□□□□□ -1.48
CLK1-202ENST00000409403 ZSWIM3Q96MP5 696 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 SLC2A13Q96QE2 648 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 SGPP1Q9BX95 441 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 KCNK12Q9HB15 430 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 IFT122Q9HBG6 1241 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 GGA3Q9NZ52 723 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 PDP2Q9P2J9 529 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 FTSJ1Q9UET6 329 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 CNOT7Q9UIV1 285 aaKnown RBP5.79□□□□□ -1.48
CLK1-202ENST00000409403 LRRC42Q9Y546 428 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 PCDHB6Q9Y5E3 794 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.79□□□□□ -1.48
CLK1-202ENST00000409403 A0A0A6YYJ9 748 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 TEX33O43247 280 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 NDUFS2O75306 463 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 RAD17O75943 681 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 FAM163BP0C2L3 166 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 C5AR1P21730 350 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 ALDH1B1P30837 517 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 HPDP32754 393 aaPredicted RBP5.79□□□□□ -1.48
CLK1-202ENST00000409403 GUCY1B3Q02153 619 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 PPARAQ07869 468 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 GTF2H3Q13889 308 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 ACAP1Q15027 740 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 MEA1Q16626 185 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms