RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 PCDHGB4Q9UN71 923 aa13.43□□□□□ -0.26
PTPRN-202ENST00000409251 INPP5FQ9Y2H2 1132 aa13.43□□□□□ -0.26
PTPRN-202ENST00000409251 DTNAQ9Y4J8 743 aa13.43□□□□□ -0.26
PTPRN-202ENST00000409251 PCDHGB5Q9Y5G0 923 aa13.43□□□□□ -0.26
PTPRN-202ENST00000409251 A0A0G2JLL6 359 aaPredicted RBP13.42□□□□□ -0.26
PTPRN-202ENST00000409251 ABLIM1O14639 778 aa13.42□□□□□ -0.26
PTPRN-202ENST00000409251 RARBP10826 455 aa13.42□□□□□ -0.26
PTPRN-202ENST00000409251 PKNOX1P55347 436 aa13.42□□□□□ -0.26
PTPRN-202ENST00000409251 FOLH1Q04609 750 aa13.42□□□□□ -0.26
PTPRN-202ENST00000409251 EFHC1Q5JVL4 640 aa13.42□□□□□ -0.26
PTPRN-202ENST00000409251 SCYL2Q6P3W7 929 aa13.42□□□□□ -0.26
PTPRN-202ENST00000409251 TSHZ1Q6ZSZ6 1077 aa13.42□□□□□ -0.26
PTPRN-202ENST00000409251 PRRT2Q7Z6L0 340 aaPredicted RBP13.42□□□□□ -0.26
PTPRN-202ENST00000409251 RNF169Q8NCN4 708 aa13.42□□□□□ -0.26
PTPRN-202ENST00000409251 ZSCAN18Q8TBC5 510 aaPredicted RBP13.42□□□□□ -0.26
PTPRN-202ENST00000409251 ACTL9Q8TC94 416 aa13.42□□□□□ -0.26
PTPRN-202ENST00000409251 LRGUKQ96M69 825 aa13.42□□□□□ -0.26
PTPRN-202ENST00000409251 HAPLN2Q9GZV7 340 aa13.42□□□□□ -0.26
PTPRN-202ENST00000409251 SEMA6AQ9H2E6 1030 aa13.42□□□□□ -0.26
PTPRN-202ENST00000409251 ANKEF1Q9NU02 776 aa13.42□□□□□ -0.26
PTPRN-202ENST00000409251 ZNF180Q9UJW8 692 aa13.42□□□□□ -0.26
PTPRN-202ENST00000409251 ADAMTS5Q9UNA0 930 aa13.42□□□□□ -0.26
PTPRN-202ENST00000409251 COMMD3-BMI1R4GMX3 469 aa13.42□□□□□ -0.26
PTPRN-202ENST00000409251 SIGLEC16A6NMB1 481 aa13.42□□□□□ -0.26
PTPRN-202ENST00000409251 KBTBD13C9JR72 458 aa13.42□□□□□ -0.26
PTPRN-202ENST00000409251 CNMDO75829 334 aa13.42□□□□□ -0.26
PTPRN-202ENST00000409251 PPIDQ08752 370 aaKnown RBP13.42□□□□□ -0.26
PTPRN-202ENST00000409251 SNAPC2Q13487 334 aa13.42□□□□□ -0.26
PTPRN-202ENST00000409251 CDHR3Q6ZTQ4 885 aa13.42□□□□□ -0.26
PTPRN-202ENST00000409251 NIPA1Q7RTP0 329 aa13.42□□□□□ -0.26
PTPRN-202ENST00000409251 DHDDSQ86SQ9 333 aa13.42□□□□□ -0.26
PTPRN-202ENST00000409251 TMEM192Q8IY95 271 aa13.42□□□□□ -0.26
PTPRN-202ENST00000409251 MCPH1Q8NEM0 835 aa13.42□□□□□ -0.26
PTPRN-202ENST00000409251 ADAM32Q8TC27 787 aa13.42□□□□□ -0.26
PTPRN-202ENST00000409251 DENND1AQ8TEH3 1009 aa13.42□□□□□ -0.26
PTPRN-202ENST00000409251 PLEKHG4BQ96PX9 1271 aa13.42□□□□□ -0.26
PTPRN-202ENST00000409251 NRBP2Q9NSY0 501 aa13.42□□□□□ -0.26
PTPRN-202ENST00000409251 LGALS13Q9UHV8 139 aa13.42□□□□□ -0.26
PTPRN-202ENST00000409251 UGT1A9O60656 530 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 CYP2B6P20813 491 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 HUNKP57058 714 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 CAPSQ13938 189 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 OASLQ15646 514 aaKnown RBP13.41□□□□□ -0.26
PTPRN-202ENST00000409251 CTC1Q2NKJ3 1217 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 C6orf52Q5T4I8 152 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 KRT39Q6A163 491 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 C1orf228Q6PIY5 440 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 ILDR2Q71H61 639 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 ARMCX2Q7L311 632 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 AMIGO2Q86SJ2 522 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 MCOLN2Q8IZK6 566 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 EMC1Q8N766 993 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 FBXL13Q8NEE6 735 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 TTC16Q8NEE8 873 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 COPS7BQ9H9Q2 264 aaPredicted RBP13.41□□□□□ -0.26
PTPRN-202ENST00000409251 UGT1A7Q9HAW7 530 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 UGT1A10Q9HAW8 530 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 UGT1A8Q9HAW9 530 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 DMAC2Q9NW81 257 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 NOCTQ9UK39 431 aaKnown RBP13.41□□□□□ -0.26
PTPRN-202ENST00000409251 IQANK1A0A1B0GTG1 560 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 ZSCAN9O15535 394 aaPredicted RBP13.41□□□□□ -0.26
PTPRN-202ENST00000409251 MAPTP10636 758 aaKnown RBP13.41□□□□□ -0.26
PTPRN-202ENST00000409251 MX2P20592 715 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 SERPINB5P36952 375 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 GPX6P59796 221 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 OTUD4Q01804 1114 aaKnown RBP13.41□□□□□ -0.26
PTPRN-202ENST00000409251 CYLC2Q14093 348 aaPredicted RBP13.41□□□□□ -0.26
PTPRN-202ENST00000409251 CCNG2Q16589 344 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 CYP1B1Q16678 543 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 NADK2Q4G0N4 442 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 MFSD4BQ5TF39 518 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 EFCAB12Q6NXP0 572 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 GPD1LQ8N335 351 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 CD101Q93033 1021 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 PAIP2BQ9ULR5 123 aaKnown RBP13.41□□□□□ -0.26
PTPRN-202ENST00000409251 DCXO43602 365 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 CSPG5O95196 566 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 APRTP07741 180 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 NCKAP1LP55160 1127 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 CBX3Q13185 183 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 MPP3Q13368 585 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 ATP1A4Q13733 1029 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 TRMT5Q32P41 509 aaKnown RBP13.41□□□□□ -0.26
PTPRN-202ENST00000409251 DARS2Q6PI48 645 aaKnown RBP13.41□□□□□ -0.26
PTPRN-202ENST00000409251 NETO2Q8NC67 525 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 ZNF516Q92618 1163 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 MOCOSQ96EN8 888 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 MTMR12Q9C0I1 747 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 WWP1Q9H0M0 922 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 IL1RAPL1Q9NZN1 696 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 SENP1Q9P0U3 644 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 ADAMTS6Q9UKP5 1117 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 MROH7Q68CQ1 1323 aa13.41□□□□□ -0.26
PTPRN-202ENST00000409251 CCDC78A2IDD5 438 aa13.4□□□□□ -0.26
PTPRN-202ENST00000409251 ASLP04424 464 aa13.4□□□□□ -0.26
PTPRN-202ENST00000409251 SRGAP2BP0DMP2 458 aa13.4□□□□□ -0.26
PTPRN-202ENST00000409251 ENO3P13929 434 aaPredicted RBP13.4□□□□□ -0.26
PTPRN-202ENST00000409251 GNA15P30679 374 aa13.4□□□□□ -0.26
PTPRN-202ENST00000409251 ABCG1P45844 678 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms