RNA–Protein interactions for RNA: ENST00000409204.4

PCDH20-201, Transcript of protocadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDH20, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20-201ENST00000409204 DEFB128Q7Z7B8 93 aa12.52□□□□□ -0.41
PCDH20-201ENST00000409204 OOSP2Q86WS3 158 aa12.52□□□□□ -0.41
PCDH20-201ENST00000409204 ICA1LQ8NDH6 482 aa12.52□□□□□ -0.41
PCDH20-201ENST00000409204 HASPINQ8TF76 798 aa12.52□□□□□ -0.41
PCDH20-201ENST00000409204 ZIM3Q96PE6 472 aa12.52□□□□□ -0.41
PCDH20-201ENST00000409204 TBCBQ99426 244 aa12.52□□□□□ -0.41
PCDH20-201ENST00000409204 PABPC3Q9H361 631 aaKnown RBP12.52□□□□□ -0.41
PCDH20-201ENST00000409204 VPS28Q9UK41 221 aa12.52□□□□□ -0.41
PCDH20-201ENST00000409204 CDYLQ9Y232 598 aa12.52□□□□□ -0.41
PCDH20-201ENST00000409204 ITGB4P16144 1822 aa12.52□□□□□ -0.41
PCDH20-201ENST00000409204 RNASEH1O60930 286 aaKnown RBP12.52□□□□□ -0.41
PCDH20-201ENST00000409204 CDH2P19022 906 aaPredicted RBP12.52□□□□□ -0.41
PCDH20-201ENST00000409204 POLE2P56282 527 aa12.52□□□□□ -0.41
PCDH20-201ENST00000409204 FSCN1Q16658 493 aaKnown RBP12.52□□□□□ -0.41
PCDH20-201ENST00000409204 CHADLQ6NUI6 762 aa12.52□□□□□ -0.41
PCDH20-201ENST00000409204 ZNF606Q8WXB4 792 aa12.52□□□□□ -0.41
PCDH20-201ENST00000409204 ANKRD7Q92527 254 aa12.52□□□□□ -0.41
PCDH20-201ENST00000409204 BAP1Q92560 729 aa12.52□□□□□ -0.41
PCDH20-201ENST00000409204 FAM84AQ96KN4 292 aa12.52□□□□□ -0.41
PCDH20-201ENST00000409204 MYCBPQ99417 103 aaPredicted RBP12.52□□□□□ -0.41
PCDH20-201ENST00000409204 NEUROG2Q9H2A3 272 aa12.52□□□□□ -0.41
PCDH20-201ENST00000409204 TMEM134Q9H6X4 195 aa12.52□□□□□ -0.41
PCDH20-201ENST00000409204 GPATCH2LQ9NWQ4 482 aa12.52□□□□□ -0.41
PCDH20-201ENST00000409204 SLC25A13Q9UJS0 675 aa12.52□□□□□ -0.41
PCDH20-201ENST00000409204 IPPQ9Y573 584 aa12.52□□□□□ -0.41
PCDH20-201ENST00000409204 SLC15A5A6NIM6 579 aa12.52□□□□□ -0.41
PCDH20-201ENST00000409204 VPS26AO75436 327 aa12.52□□□□□ -0.41
PCDH20-201ENST00000409204 PBX1P40424 430 aa12.52□□□□□ -0.41
PCDH20-201ENST00000409204 PLA2G4AP47712 749 aa12.52□□□□□ -0.41
PCDH20-201ENST00000409204 PPP3CCP48454 512 aa12.52□□□□□ -0.41
PCDH20-201ENST00000409204 AMPD2Q01433 879 aa12.52□□□□□ -0.41
PCDH20-201ENST00000409204 UNC45BQ8IWX7 931 aa12.52□□□□□ -0.41
PCDH20-201ENST00000409204 CMTM5Q96DZ9 223 aa12.52□□□□□ -0.41
PCDH20-201ENST00000409204 TLR8Q9NR97 1041 aaKnown RBP12.52□□□□□ -0.41
PCDH20-201ENST00000409204 AURKCQ9UQB9 309 aa12.52□□□□□ -0.41
PCDH20-201ENST00000409204 POMCP01189 267 aa12.51□□□□□ -0.41
PCDH20-201ENST00000409204 JCHAINP01591 159 aa12.51□□□□□ -0.41
PCDH20-201ENST00000409204 CDH8P55286 799 aa12.51□□□□□ -0.41
PCDH20-201ENST00000409204 SPOCD1Q6ZMY3 1216 aa12.51□□□□□ -0.41
PCDH20-201ENST00000409204 PLPPR4Q7Z2D5 763 aa12.51□□□□□ -0.41
PCDH20-201ENST00000409204 EMC1Q8N766 993 aa12.51□□□□□ -0.41
PCDH20-201ENST00000409204 RIN2Q8WYP3 895 aaPredicted RBP12.51□□□□□ -0.41
PCDH20-201ENST00000409204 SELENONQ9NZV5 590 aa12.51□□□□□ -0.41
PCDH20-201ENST00000409204 ARHGAP26Q9UNA1 814 aa12.51□□□□□ -0.41
PCDH20-201ENST00000409204 TBKBP1A7MCY6 615 aa12.51□□□□□ -0.41
PCDH20-201ENST00000409204 LACTBL1A8MY62 500 aa12.51□□□□□ -0.41
PCDH20-201ENST00000409204 ZNF862O60290 1169 aa12.51□□□□□ -0.41
PCDH20-201ENST00000409204 ITGALP20701 1170 aa12.51□□□□□ -0.41
PCDH20-201ENST00000409204 CCR1P32246 355 aa12.51□□□□□ -0.41
PCDH20-201ENST00000409204 PTPN7P35236 360 aa12.51□□□□□ -0.41
PCDH20-201ENST00000409204 OCA2Q04671 838 aa12.51□□□□□ -0.41
PCDH20-201ENST00000409204 ZNF268Q14587 947 aaPredicted RBP12.51□□□□□ -0.41
PCDH20-201ENST00000409204 AGGF1Q8N302 714 aaeCLIP12.51□□□□□ -0.41
PCDH20-201ENST00000409204 ATG4AQ8WYN0 398 aa12.51□□□□□ -0.41
PCDH20-201ENST00000409204 VCPIP1Q96JH7 1222 aa12.51□□□□□ -0.41
PCDH20-201ENST00000409204 UBE2OQ9C0C9 1292 aaKnown RBP12.51□□□□□ -0.41
PCDH20-201ENST00000409204 GANQ9H2C0 597 aa12.51□□□□□ -0.41
PCDH20-201ENST00000409204 GIMAP4Q9NUV9 329 aa12.51□□□□□ -0.41
PCDH20-201ENST00000409204 DRG1Q9Y295 367 aaKnown RBP12.51□□□□□ -0.41
PCDH20-201ENST00000409204 MAP3K6O95382 1288 aa12.51□□□□□ -0.41
PCDH20-201ENST00000409204 NDST1P52848 882 aa12.51□□□□□ -0.41
PCDH20-201ENST00000409204 NCKAP1LP55160 1127 aa12.51□□□□□ -0.41
PCDH20-201ENST00000409204 RHOAP61586 193 aa12.51□□□□□ -0.41
PCDH20-201ENST00000409204 MAP2K5Q13163 448 aa12.51□□□□□ -0.41
PCDH20-201ENST00000409204 BTG3Q14201 252 aaPredicted RBP12.51□□□□□ -0.41
PCDH20-201ENST00000409204 CCNG2Q16589 344 aa12.51□□□□□ -0.41
PCDH20-201ENST00000409204 ZNF284Q2VY69 593 aa12.51□□□□□ -0.41
PCDH20-201ENST00000409204 ZC3H12BQ5HYM0 836 aaKnown RBP12.51□□□□□ -0.41
PCDH20-201ENST00000409204 RETSATQ6NUM9 610 aa12.51□□□□□ -0.41
PCDH20-201ENST00000409204 DENND1BQ6P3S1 775 aa12.51□□□□□ -0.41
PCDH20-201ENST00000409204 DENND5BQ6ZUT9 1274 aa12.51□□□□□ -0.41
PCDH20-201ENST00000409204 ZDHHC17Q8IUH5 632 aa12.51□□□□□ -0.41
PCDH20-201ENST00000409204 HERC6Q8IVU3 1022 aa12.51□□□□□ -0.41
PCDH20-201ENST00000409204 CARNMT1Q8N4J0 409 aa12.51□□□□□ -0.41
PCDH20-201ENST00000409204 RNF19AQ9NV58 838 aa12.51□□□□□ -0.41
PCDH20-201ENST00000409204 GID8Q9NWU2 228 aa12.51□□□□□ -0.41
PCDH20-201ENST00000409204 WWOXQ9NZC7 414 aa12.51□□□□□ -0.41
PCDH20-201ENST00000409204 TSPAN16Q9UKR8 245 aa12.51□□□□□ -0.41
PCDH20-201ENST00000409204 TRPV2Q9Y5S1 764 aa12.51□□□□□ -0.41
PCDH20-201ENST00000409204 PQBP1O60828 265 aaKnown RBP12.5□□□□□ -0.41
PCDH20-201ENST00000409204 GLRA3O75311 464 aa12.5□□□□□ -0.41
PCDH20-201ENST00000409204 SRP72O76094 671 aaKnown RBP12.5□□□□□ -0.41
PCDH20-201ENST00000409204 NOL9Q5SY16 702 aaKnown RBP12.5□□□□□ -0.41
PCDH20-201ENST00000409204 IFNEQ86WN2 208 aa12.5□□□□□ -0.41
PCDH20-201ENST00000409204 CCDC126Q96EE4 140 aa12.5□□□□□ -0.41
PCDH20-201ENST00000409204 TMA16Q96EY4 203 aaKnown RBP12.5□□□□□ -0.41
PCDH20-201ENST00000409204 TEPSINQ96N21 525 aa12.5□□□□□ -0.41
PCDH20-201ENST00000409204 DACH2Q96NX9 599 aa12.5□□□□□ -0.41
PCDH20-201ENST00000409204 PNKPQ96T60 521 aa12.5□□□□□ -0.41
PCDH20-201ENST00000409204 BRD8Q9H0E9 1235 aa12.5□□□□□ -0.41
PCDH20-201ENST00000409204 HSD3B7Q9H2F3 369 aa12.5□□□□□ -0.41
PCDH20-201ENST00000409204 MYH14Q7Z406 1995 aaKnown RBP12.5□□□□□ -0.41
PCDH20-201ENST00000409204 SOWAHBA6NEL2 793 aa12.5□□□□□ -0.41
PCDH20-201ENST00000409204 EIF3HO15372 352 aaKnown RBP eCLIP12.5□□□□□ -0.41
PCDH20-201ENST00000409204 CABYRO75952 493 aa12.5□□□□□ -0.41
PCDH20-201ENST00000409204 HIRAP54198 1017 aaPredicted RBP12.5□□□□□ -0.41
PCDH20-201ENST00000409204 MAP3K10Q02779 954 aa12.5□□□□□ -0.41
PCDH20-201ENST00000409204 LRRC74AQ0VAA2 488 aa12.5□□□□□ -0.41
PCDH20-201ENST00000409204 FOXR2Q6PJQ5 311 aa12.5□□□□□ -0.41
PCDH20-201ENST00000409204 CXCL17Q6UXB2 119 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms